STRINGSTRING
OsI_20922 OsI_20922 OsI_31111 OsI_31111 OsI_27631 OsI_27631 OsI_03285 OsI_03285 OsI_38049 OsI_38049 OsI_27183 OsI_27183 OsI_32315 OsI_32315
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_20922Glutamine amidotransferase type-2 domain-containing protein. (2193 aa)
OsI_311114Fe-4S ferredoxin-type domain-containing protein. (311 aa)
OsI_27631Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (406 aa)
OsI_03285Glutamine amidotransferase type-2 domain-containing protein. (2157 aa)
OsI_38049Histidine kinase domain-containing protein. (598 aa)
OsI_27183Glutamine amidotransferase type-2 domain-containing protein. (1615 aa)
OsI_32315Pyr_redox_2 domain-containing protein. (340 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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