STRINGSTRING
OsI_21774 OsI_21774 OsI_22801 OsI_22801 OsI_23258 OsI_23258 OsI_25526 OsI_25526 OsI_27276 OsI_27276 OsI_29374 OsI_29374 OsI_30219 OsI_30219 OsI_30225 OsI_30225 OsI_31373 OsI_31373 OsI_01135 OsI_01135 OsI_01136 OsI_01136 OsI_01139 OsI_01139 OsI_01140 OsI_01140 OsI_01141 OsI_01141 OsI_01697 OsI_01697 OsI_03270 OsI_03270 OsI_03887 OsI_03887 LSM3 LSM3 OsI_04736 OsI_04736 OsI_04749 OsI_04749 OsI_38058 OsI_38058 OsI_37531 OsI_37531 OsI_35924 OsI_35924 OsI_35166 OsI_35166 OsI_34610 OsI_34610 OsI_33622 OsI_33622 OsI_33620 OsI_33620 OsI_33617 OsI_33617 OsI_33614 OsI_33614 OsI_32948 OsI_32948 OsI_32947 OsI_32947 OsI_32708 OsI_32708 OsI_32689 OsI_32689 OsI_32688 OsI_32688 OsI_32687 OsI_32687 OsI_32685 OsI_32685 OsI_32605 OsI_32605 OsI_32600 OsI_32600 OsI_32338 OsI_32338 OsI_31896 OsI_31896 OsI_28280 OsI_28280 OsI_27848 OsI_27848 OsI_25054 OsI_25054 OsI_25049 OsI_25049 OsI_25006 OsI_25006 OsI_20400 OsI_20400 OsI_20399 OsI_20399 OsI_18554 OsI_18554 LSM5 LSM5 OsI_18118 OsI_18118 OsI_19459 OsI_19459 OsI_14693 OsI_14693 LSM1 LSM1 OsI_15663 OsI_15663 OsI_17044 OsI_17044 OsI_16671 OsI_16671 OsI_13424 OsI_13424 OsI_10095 OsI_10095 OsI_12833 OsI_12833 OsI_14228 OsI_14228 OsI_11312 OsI_11312 OsI_09977 OsI_09977 OsI_09623 OsI_09623 OsI_13502 OsI_13502 OsI_13472 OsI_13472 OsI_09184 OsI_09184 OsI_08979 OsI_08979 OsI_07364 OsI_07364 OsI_06835 OsI_06835 OsI_06571 OsI_06571 OsI_09281 OsI_09281 OsI_09350 OsI_09350 OsI_01143 OsI_01143 OsI_01133 OsI_01133 OsI_01132 OsI_01132 OsI_01702 OsI_01702 OsI_33618 OsI_33618 OsI_33615 OsI_33615 OsI_33613 OsI_33613 OsI_33543 OsI_33543 OsI_32709 OsI_32709 OsI_32707 OsI_32707 OsI_32684 OsI_32684 OsI_32639 OsI_32639 OsI_32610 OsI_32610 OsI_32603 OsI_32603 OsI_32598 OsI_32598 OsI_32595 OsI_32595 OsI_05586 OsI_05586 OsI_05643 OsI_05643 OsI_06832 OsI_06832 OsI_07409 OsI_07409 OsI_07612 OsI_07612 OsI_09397 OsI_09397 OsI_09779 OsI_09779 OsI_10162 OsI_10162 OsI_12837 OsI_12837 OsI_17325 OsI_17325 OsI_17989 OsI_17989 OsI_19893 OsI_19893 OsI_21555 OsI_21555
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_21774DUF1618 domain-containing protein. (604 aa)
OsI_22801Uncharacterized protein. (267 aa)
OsI_23258Uncharacterized protein. (273 aa)
OsI_25526WH1 domain-containing protein. (382 aa)
OsI_27276Uncharacterized protein. (726 aa)
OsI_29374Uncharacterized protein. (244 aa)
OsI_30219YTH domain-containing protein. (695 aa)
OsI_30225YTH domain-containing protein. (210 aa)
OsI_31373Uncharacterized protein. (280 aa)
OsI_01135DUF1618 domain-containing protein. (386 aa)
OsI_01136DUF1618 domain-containing protein. (388 aa)
OsI_01139DUF1618 domain-containing protein. (373 aa)
OsI_01140DUF1618 domain-containing protein. (357 aa)
OsI_01141DUF1618 domain-containing protein. (382 aa)
OsI_01697Uncharacterized protein. (159 aa)
OsI_03270YTH domain-containing protein. (594 aa)
OsI_03887PAT1 domain-containing protein. (827 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (104 aa)
OsI_04736Uncharacterized protein. (197 aa)
OsI_04749KH_dom_type_1 domain-containing protein. (239 aa)
OsI_38058Uncharacterized protein. (334 aa)
OsI_37531Uncharacterized protein. (374 aa)
OsI_35924Uncharacterized protein. (306 aa)
OsI_35166WH1 domain-containing protein. (332 aa)
OsI_34610Uncharacterized protein. (2367 aa)
OsI_33622Uncharacterized protein. (298 aa)
OsI_33620Uncharacterized protein. (683 aa)
OsI_33617Uncharacterized protein. (801 aa)
OsI_33614Uncharacterized protein. (86 aa)
OsI_32948Uncharacterized protein. (586 aa)
OsI_32947Uncharacterized protein. (195 aa)
OsI_32708Uncharacterized protein. (85 aa)
OsI_32689F-box domain-containing protein. (391 aa)
OsI_32688Uncharacterized protein. (238 aa)
OsI_32687F-box domain-containing protein. (386 aa)
OsI_32685F-box domain-containing protein. (415 aa)
OsI_32605Uncharacterized protein. (267 aa)
OsI_32600Uncharacterized protein. (184 aa)
OsI_32338DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1384 aa)
OsI_31896PUM-HD domain-containing protein. (988 aa)
OsI_28280YTH domain-containing protein. (604 aa)
OsI_27848Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (120 aa)
OsI_25054YTH domain-containing protein. (636 aa)
OsI_25049Uncharacterized protein. (363 aa)
OsI_25006Uncharacterized protein. (938 aa)
OsI_20400Uncharacterized protein. (174 aa)
OsI_20399NOT2_3_5 domain-containing protein. (656 aa)
OsI_18554Uncharacterized protein. (362 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
OsI_18118YTH domain-containing protein. (638 aa)
OsI_19459F-box domain-containing protein. (405 aa)
OsI_14693YTH domain-containing protein. (667 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (129 aa)
OsI_15663Sm domain-containing protein. (97 aa)
OsI_17044C3H1-type domain-containing protein. (1598 aa)
OsI_16671S1 domain-containing protein. (315 aa)
OsI_13424NOT2_3_5 domain-containing protein. (625 aa)
OsI_10095YTH domain-containing protein. (707 aa)
OsI_12833Uncharacterized protein. (856 aa)
OsI_14228Uncharacterized protein. (492 aa)
OsI_11312YTH domain-containing protein. (699 aa)
OsI_09977Uncharacterized protein. (138 aa)
OsI_09623Uncharacterized protein. (1799 aa)
OsI_13502YTH domain-containing protein. (661 aa)
OsI_13472Uncharacterized protein. (136 aa)
OsI_09184NOT2_3_5 domain-containing protein. (622 aa)
OsI_08979DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1010 aa)
OsI_07364Sm domain-containing protein. (97 aa)
OsI_06835PAT1 domain-containing protein. (830 aa)
OsI_06571Uncharacterized protein. (475 aa)
OsI_09281Uncharacterized protein. (295 aa)
OsI_09350Nudix hydrolase domain-containing protein. (321 aa)
OsI_01143DUF1618 domain-containing protein. (515 aa)
OsI_01133DUF1618 domain-containing protein. (441 aa)
OsI_01132DUF1618 domain-containing protein. (502 aa)
OsI_01702YTH domain-containing protein. (686 aa)
OsI_33618Uncharacterized protein. (738 aa)
OsI_33615Uncharacterized protein. (656 aa)
OsI_33613Uncharacterized protein. (647 aa)
OsI_33543Endo/exonuclease/phosphatase domain-containing protein. (563 aa)
OsI_32709F-box domain-containing protein. (437 aa)
OsI_32707F-box domain-containing protein. (265 aa)
OsI_32684F-box domain-containing protein. (385 aa)
OsI_32639Uncharacterized protein. (292 aa)
OsI_32610Uncharacterized protein. (301 aa)
OsI_32603Uncharacterized protein. (274 aa)
OsI_32598F-box domain-containing protein. (429 aa)
OsI_32595Uncharacterized protein. (337 aa)
OsI_05586RPOL4c domain-containing protein. (142 aa)
OsI_05643Uncharacterized protein. (597 aa)
OsI_06832PAT1 domain-containing protein. (898 aa)
OsI_07409Uncharacterized protein. (825 aa)
OsI_07612Uncharacterized protein. (408 aa)
OsI_09397NTP_transf_9 domain-containing protein. (131 aa)
OsI_09779Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1883 aa)
OsI_10162Uncharacterized protein. (607 aa)
OsI_12837Uncharacterized protein. (853 aa)
OsI_17325YTH domain-containing protein. (244 aa)
OsI_17989Uncharacterized protein. (329 aa)
OsI_19893Uncharacterized protein. (177 aa)
OsI_21555Uncharacterized protein. (335 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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