STRINGSTRING
OsI_05517 OsI_05517 OsI_05126 OsI_05126 OsI_14361 OsI_14361 OsI_04771 OsI_04771 OsI_31047 OsI_31047 OsI_29141 OsI_29141 OsI_29140 OsI_29140 OsI_23532 OsI_23532 OsI_18749 OsI_18749 OsI_12827 OsI_12827 OsI_06339 OsI_06339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_05517ABC transporter domain-containing protein. (404 aa)
OsI_05126Uncharacterized protein. (77 aa)
OsI_14361Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (249 aa)
OsI_04771Rhomboid domain-containing protein. (273 aa)
OsI_31047ABC transporter domain-containing protein. (927 aa)
OsI_29141ABC transporter domain-containing protein. (804 aa)
OsI_29140ABC transporter domain-containing protein. (959 aa)
OsI_23532ABC transporter domain-containing protein. (949 aa)
OsI_18749Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (242 aa)
OsI_12827UBA domain-containing protein. (399 aa)
OsI_06339ABC transporter domain-containing protein. (854 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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