12 items (Oryza sativa Indica) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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textmining

co-expression

protein homology

Your Input:
	OsI_37334	zf-RING-like domain-containing protein. (336 aa)
	OsI_36551	SMC_N domain-containing protein. (923 aa)
	OsI_34953	Uncharacterized protein. (338 aa)
	OsI_29840	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (396 aa)
	OsI_24559	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (96 aa)
	OsI_18272	Uncharacterized protein. (924 aa)
	OsI_21247	SMC_N domain-containing protein. (1179 aa)
	OsI_20982	SP-RING-type domain-containing protein. (221 aa)
	OsI_13308	Uncharacterized protein. (813 aa)
	OsI_06217	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (360 aa)
	OsI_02544	Uncharacterized protein. (144 aa)
	OsI_06924	Uncharacterized protein. (384 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_02544	OsI_06217	B8AAQ1	B8AJA9	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.956
OsI_02544	OsI_13308	B8AAQ1	B8AQP4	Uncharacterized protein.	Uncharacterized protein.	0.782
OsI_02544	OsI_18272	B8AAQ1	B8AXJ3	Uncharacterized protein.	Uncharacterized protein.	0.782
OsI_02544	OsI_21247	B8AAQ1	B8AXI3	Uncharacterized protein.	SMC_N domain-containing protein.	0.979
OsI_02544	OsI_24559	B8AAQ1	B8B6H7	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.956
OsI_02544	OsI_29840	B8AAQ1	B8BCB8	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.956
OsI_02544	OsI_34953	B8AAQ1	B8BIV3	Uncharacterized protein.	Uncharacterized protein.	0.979
OsI_02544	OsI_36551	B8AAQ1	B8BL58	Uncharacterized protein.	SMC_N domain-containing protein.	0.979
OsI_02544	OsI_37334	B8AAQ1	B8BLU4	Uncharacterized protein.	zf-RING-like domain-containing protein.	0.979
OsI_06217	OsI_02544	B8AJA9	B8AAQ1	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	Uncharacterized protein.	0.956
OsI_06217	OsI_06924	B8AJA9	A2X3Z0	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	Uncharacterized protein.	0.496
OsI_06217	OsI_20982	B8AJA9	B8AWQ9	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	SP-RING-type domain-containing protein.	0.970
OsI_06217	OsI_21247	B8AJA9	B8AXI3	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	SMC_N domain-containing protein.	0.976
OsI_06217	OsI_34953	B8AJA9	B8BIV3	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	Uncharacterized protein.	0.973
OsI_06217	OsI_36551	B8AJA9	B8BL58	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	SMC_N domain-containing protein.	0.976
OsI_06217	OsI_37334	B8AJA9	B8BLU4	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	zf-RING-like domain-containing protein.	0.973
OsI_06924	OsI_06217	A2X3Z0	B8AJA9	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.496
OsI_06924	OsI_20982	A2X3Z0	B8AWQ9	Uncharacterized protein.	SP-RING-type domain-containing protein.	0.471
OsI_06924	OsI_21247	A2X3Z0	B8AXI3	Uncharacterized protein.	SMC_N domain-containing protein.	0.588
OsI_06924	OsI_24559	A2X3Z0	B8B6H7	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.496

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