9 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_13799	Uncharacterized protein. (270 aa)
	OsI_26824	RING-type domain-containing protein. (389 aa)
	OsI_29764	TPR_REGION domain-containing protein. (750 aa)
	OsI_33961	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (394 aa)
	OsI_38626	Uncharacterized protein. (108 aa)
	OsI_17423	Uncharacterized protein. (940 aa)
	OsI_01876	LRRNT_2 domain-containing protein. (275 aa)
	OsI_01869	Uncharacterized protein. (512 aa)
	OsI_24927	Uncharacterized protein. (280 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_13799	OsI_17423	A2XMN3	A2XXL5	Uncharacterized protein.	Uncharacterized protein.	0.451
OsI_13799	OsI_26824	A2XMN3	B8B8C7	Uncharacterized protein.	RING-type domain-containing protein.	0.435
OsI_13799	OsI_29764	A2XMN3	B8BC53	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.452
OsI_17423	OsI_13799	A2XXL5	A2XMN3	Uncharacterized protein.	Uncharacterized protein.	0.451
OsI_17423	OsI_24927	A2XXL5	B8B7C4	Uncharacterized protein.	Uncharacterized protein.	0.451
OsI_17423	OsI_26824	A2XXL5	B8B8C7	Uncharacterized protein.	RING-type domain-containing protein.	0.896
OsI_17423	OsI_29764	A2XXL5	B8BC53	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.975
OsI_17423	OsI_33961	A2XXL5	B8BHD5	Uncharacterized protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.883
OsI_24927	OsI_17423	B8B7C4	A2XXL5	Uncharacterized protein.	Uncharacterized protein.	0.451
OsI_24927	OsI_26824	B8B7C4	B8B8C7	Uncharacterized protein.	RING-type domain-containing protein.	0.435
OsI_24927	OsI_29764	B8B7C4	B8BC53	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.452
OsI_26824	OsI_13799	B8B8C7	A2XMN3	RING-type domain-containing protein.	Uncharacterized protein.	0.435
OsI_26824	OsI_17423	B8B8C7	A2XXL5	RING-type domain-containing protein.	Uncharacterized protein.	0.896
OsI_26824	OsI_24927	B8B8C7	B8B7C4	RING-type domain-containing protein.	Uncharacterized protein.	0.435
OsI_26824	OsI_29764	B8B8C7	B8BC53	RING-type domain-containing protein.	TPR_REGION domain-containing protein.	0.987
OsI_26824	OsI_33961	B8B8C7	B8BHD5	RING-type domain-containing protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.999
OsI_29764	OsI_13799	B8BC53	A2XMN3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.452
OsI_29764	OsI_17423	B8BC53	A2XXL5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.975
OsI_29764	OsI_24927	B8BC53	B8B7C4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.452
OsI_29764	OsI_26824	B8BC53	B8B8C7	TPR_REGION domain-containing protein.	RING-type domain-containing protein.	0.987

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