STRINGSTRING
OsI_16800 OsI_16800 OsI_20924 OsI_20924 OsI_20933 OsI_20933 OsI_21009 OsI_21009 OsI_21217 OsI_21217 OsI_23659 OsI_23659 OsI_32038 OsI_32038 OsI_35258 OsI_35258 OsI_36586 OsI_36586 OsI_37606 OsI_37606 OsI_02584 OsI_02584 OsI_02586 OsI_02586 OsI_01192 OsI_01192 OsI_00145 OsI_00145 OsI_09204 OsI_09204 OsI_07899 OsI_07899 OsI_06773 OsI_06773 OsI_05919 OsI_05919 OsI_12282 OsI_12282 OsI_10237 OsI_10237 OsI_11963 OsI_11963 OsI_17929 OsI_17929 OsI_15137 OsI_15137 OsI_20275 OsI_20275 OsI_21607 OsI_21607 OsI_22356 OsI_22356 OsI_32912 OsI_32912 OsI_39040 OsI_39040 OsI_37667 OsI_37667 OsI_38435 OsI_38435 OsI_17225 OsI_17225 OsI_00165 OsI_00165 OsI_21094 OsI_21094 OsI_03568 OsI_03568 OsI_03688 OsI_03688 OsI_03761 OsI_03761 OsI_07100 OsI_07100 OsI_07431 OsI_07431 OsI_07585 OsI_07585 OsI_12823 OsI_12823 OsI_14349 OsI_14349
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_16800Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (774 aa)
OsI_20924Uncharacterized protein. (111 aa)
OsI_20933Uncharacterized protein. (198 aa)
OsI_21009Uncharacterized protein. (644 aa)
OsI_21217Tr-type G domain-containing protein. (1290 aa)
OsI_23659Tr-type G domain-containing protein. (996 aa)
OsI_32038Tr-type G domain-containing protein. (716 aa)
OsI_35258Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (389 aa)
OsI_36586H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (196 aa)
OsI_37606Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (733 aa)
OsI_02584Tr-type G domain-containing protein. (854 aa)
OsI_02586Tr-type G domain-containing protein. (745 aa)
OsI_01192Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (319 aa)
OsI_00145RanBP2-type domain-containing protein. (780 aa)
OsI_09204Uncharacterized protein. (120 aa)
OsI_07899Elongation factor Tu. (511 aa)
OsI_06773Tr-type G domain-containing protein. (661 aa)
OsI_05919Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily. (636 aa)
OsI_12282Uncharacterized protein. (743 aa)
OsI_10237Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
OsI_11963Uncharacterized protein. (261 aa)
OsI_17929Uncharacterized protein. (700 aa)
OsI_15137Tr-type G domain-containing protein. (547 aa)
OsI_20275Uncharacterized protein. (1010 aa)
OsI_21607Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily. (648 aa)
OsI_22356Alanine--tRNA ligase, chloroplastic/mitochondrial; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (996 aa)
OsI_32912Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (953 aa)
OsI_39040Tr-type G domain-containing protein. (458 aa)
OsI_37667Tr-type G domain-containing protein. (495 aa)
OsI_38435Tr-type G domain-containing protein. (877 aa)
OsI_17225Tr-type G domain-containing protein. (643 aa)
OsI_00165AA_TRNA_LIGASE_II_ALA domain-containing protein. (264 aa)
OsI_21094Tr-type G domain-containing protein. (880 aa)
OsI_03568Tr-type G domain-containing protein. (853 aa)
OsI_03688Tr-type G domain-containing protein. (826 aa)
OsI_03761Tr-type G domain-containing protein. (664 aa)
OsI_07100Tr-type G domain-containing protein. (364 aa)
OsI_07431Tr-type G domain-containing protein. (843 aa)
OsI_07585Tr-type G domain-containing protein. (951 aa)
OsI_12823Tr-type G domain-containing protein. (1029 aa)
OsI_14349Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (453 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.