STRINGSTRING
OsI_28100 OsI_28100 OsI_19330 OsI_19330 OsI_15812 OsI_15812 petA petA OsI_39029 OsI_39029 OsI_33225 OsI_33225 OsI_00781 OsI_00781 OsI_37769 OsI_37769
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_28100ATP-grasp domain-containing protein. (527 aa)
OsI_19330Uncharacterized protein. (2327 aa)
OsI_15812ATP-grasp domain-containing protein. (507 aa)
petACytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (320 aa)
OsI_39029Uncharacterized protein. (740 aa)
OsI_33225Uncharacterized protein. (1768 aa)
OsI_00781ATP-grasp domain-containing protein. (499 aa)
OsI_37769ATP-grasp domain-containing protein. (557 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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