STRINGSTRING
OsI_04360 OsI_04360 OsI_01083 OsI_01083 OsI_01974 OsI_01974 OsI_02348 OsI_02348 OsI_02952 OsI_02952 OsI_03039 OsI_03039 OsI_04241 OsI_04241 OsI_04329 OsI_04329 OsI_04736 OsI_04736 OsI_04749 OsI_04749 OsI_04816 OsI_04816 OsI_06305 OsI_06305 OsI_06857 OsI_06857 OsI_06862 OsI_06862 OsI_07214 OsI_07214 OsI_09147 OsI_09147 OsI_09197 OsI_09197 OsI_09330 OsI_09330 OsI_09718 OsI_09718 OsI_10518 OsI_10518 OsI_11150 OsI_11150 OsI_11307 OsI_11307 OsI_12406 OsI_12406 OsI_12598 OsI_12598 OsI_12726 OsI_12726 OsI_13980 OsI_13980 OsI_14707 OsI_14707 OsI_15302 OsI_15302 OsI_15622 OsI_15622 OsI_16531 OsI_16531 OsI_17051 OsI_17051 OsI_17369 OsI_17369 OsI_18537 OsI_18537 OsI_19137 OsI_19137 OsI_19893 OsI_19893 OsI_20456 OsI_20456 OsI_20772 OsI_20772 OsI_21276 OsI_21276 OsI_21861 OsI_21861 OsI_22855 OsI_22855 OsI_24321 OsI_24321 OsI_24652 OsI_24652 OsI_24976 OsI_24976 OsI_25038 OsI_25038 OsI_25452 OsI_25452 OsI_26494 OsI_26494 OsI_26623 OsI_26623 OsI_27434 OsI_27434 OsI_27689 OsI_27689 OsI_28602 OsI_28602 OsI_28953 OsI_28953 OsI_29933 OsI_29933 OsI_32207 OsI_32207 OsI_32382 OsI_32382 OsI_34533 OsI_34533 OsI_34538 OsI_34538 OsI_34873 OsI_34873 OsI_37160 OsI_37160 PETs PETs OsI_38771 OsI_38771 OsI_38459 OsI_38459 OsI_03146 OsI_03146 OsI_03304 OsI_03304 OsI_05193 OsI_05193 OsI_05325 OsI_05325 OsI_02335 OsI_02335 OsI_03774 OsI_03774 OsI_02640 OsI_02640 OsI_02634 OsI_02634 OsI_01180 OsI_01180 OsI_01203 OsI_01203 OsI_01213 OsI_01213 OsI_04386 OsI_04386 OsI_00297 OsI_00297 OsI_00447 OsI_00447 OsI_00530 OsI_00530 OsI_06267 OsI_06267 MCM5 MCM5 OsI_09429 OsI_09429 OsI_09546 OsI_09546 OsI_08089 OsI_08089 OsI_08130 OsI_08130 OsI_08182 OsI_08182 OsI_05633 OsI_05633 OsI_06998 OsI_06998 OsI_08509 OsI_08509 OsI_05793 OsI_05793 OsI_07319 OsI_07319 OsI_08979 OsI_08979 OsI_13610 OsI_13610 OsI_11173 OsI_11173 OsI_09834 OsI_09834 OsI_14191 OsI_14191 OsI_14295 OsI_14295 OsI_14307 OsI_14307 OsI_14390 OsI_14390 OsI_10164 OsI_10164 OsI_11709 OsI_11709 OsI_15081 OsI_15081 OsI_15113 OsI_15113 OsI_16671 OsI_16671 OsI_18045 OsI_18045 OsI_17298 OsI_17298 OsI_17370 OsI_17370 OsI_17372 OsI_17372 OsI_16245 OsI_16245 OsI_18077 OsI_18077 OsI_18166 OsI_18166 MCM8 MCM8 MCM3 MCM3 OsI_18944 OsI_18944 OsI_18955 OsI_18955 OsI_19075 OsI_19075 OsI_20574 OsI_20574 MCM6 MCM6 OsI_24288 OsI_24288 OsI_21690 OsI_21690 OsI_23153 OsI_23153 OsI_23219 OsI_23219 MCM9 MCM9 OsI_23597 OsI_23597 OsI_23654 OsI_23654 OsI_27049 OsI_27049 OsI_25976 OsI_25976 OsI_24654 OsI_24654 OsI_26496 OsI_26496 OsI_25208 OsI_25208 OsI_26733 OsI_26733 OsI_25303 OsI_25303 OsI_25215 OsI_25215 OsI_25453 OsI_25453 OsI_28778 OsI_28778 OsI_28022 OsI_28022 OsI_29425 OsI_29425 OsI_28229 OsI_28229 OsI_30339 OsI_30339 OsI_31194 OsI_31194 OsI_33181 OsI_33181 OsI_33537 OsI_33537 OsI_34114 OsI_34114 OsI_35554 OsI_35554 OsI_36121 OsI_36121 MCM7 MCM7 OsI_37750 OsI_37750 OsI_37231 OsI_37231 infA infA rps12-A rps12-A rpl2-A rpl2-A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_04360Uncharacterized protein. (397 aa)
OsI_01083Uncharacterized protein. (141 aa)
OsI_01974Uncharacterized protein. (559 aa)
OsI_02348CSP domain-containing protein. (98 aa)
OsI_02952Uncharacterized protein. (410 aa)
OsI_03039Uncharacterized protein. (224 aa)
OsI_04241Uncharacterized protein. (409 aa)
OsI_04329Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (142 aa)
OsI_04736Uncharacterized protein. (197 aa)
OsI_04749KH_dom_type_1 domain-containing protein. (239 aa)
OsI_04816S1 motif domain-containing protein. (651 aa)
OsI_06305AAA domain-containing protein; Belongs to the AAA ATPase family. (424 aa)
OsI_06857S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (142 aa)
OsI_06862Uncharacterized protein. (1240 aa)
OsI_07214ULP_PROTEASE domain-containing protein. (750 aa)
OsI_09147Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (658 aa)
OsI_09197AAA domain-containing protein; Belongs to the AAA ATPase family. (426 aa)
OsI_09330AAA domain-containing protein; Belongs to the AAA ATPase family. (418 aa)
OsI_09718S1-like domain-containing protein. (167 aa)
OsI_10518Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
OsI_11150S1 motif domain-containing protein. (339 aa)
OsI_11307Uncharacterized protein. (402 aa)
OsI_12406Lysine--tRNA ligase. (630 aa)
OsI_12598Uncharacterized protein. (296 aa)
OsI_12726Uncharacterized protein. (311 aa)
OsI_13980Uncharacterized protein. (262 aa)
OsI_14707Uncharacterized protein. (455 aa)
OsI_15302tRNA-binding domain-containing protein. (252 aa)
OsI_15622Uncharacterized protein. (377 aa)
OsI_16531Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (167 aa)
OsI_17051AAA domain-containing protein; Belongs to the AAA ATPase family. (448 aa)
OsI_17369Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (170 aa)
OsI_18537SHS2_Rpb7-N domain-containing protein. (175 aa)
OsI_19137Uncharacterized protein. (145 aa)
OsI_19893Uncharacterized protein. (177 aa)
OsI_20456Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1627 aa)
OsI_20772Uncharacterized protein. (536 aa)
OsI_21276Uncharacterized protein. (165 aa)
OsI_21861AAA domain-containing protein; Belongs to the AAA ATPase family. (415 aa)
OsI_22855S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (144 aa)
OsI_24321Uncharacterized protein. (191 aa)
OsI_24652Eukaryotic translation initiation factor 5A. (162 aa)
OsI_24976Uncharacterized protein. (124 aa)
OsI_25038S1 motif domain-containing protein. (865 aa)
OsI_25452eIF-5a domain-containing protein. (80 aa)
OsI_26494Uncharacterized protein. (163 aa)
OsI_26623RuvB-like helicase. (119 aa)
OsI_27434S1 motif domain-containing protein. (338 aa)
OsI_27689Uncharacterized protein. (193 aa)
OsI_28602Uncharacterized protein. (321 aa)
OsI_28953Uncharacterized protein. (107 aa)
OsI_29933Uncharacterized protein. (446 aa)
OsI_32207Zf-primase domain-containing protein. (414 aa)
OsI_32382AAA domain-containing protein; Belongs to the AAA ATPase family. (448 aa)
OsI_34533Uncharacterized protein. (413 aa)
OsI_34538Uncharacterized protein. (267 aa)
OsI_34873Uncharacterized protein. (229 aa)
OsI_37160Uncharacterized protein. (567 aa)
PETsPlastid-specific ribosomal protein-7, chloroplastic; [Elongation factor Ts, chloroplastic]: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP (By similarity). It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity). (1123 aa)
OsI_38771Ribosomal_L2_C domain-containing protein. (261 aa)
OsI_38459Eukaryotic translation initiation factor 5A. (160 aa)
OsI_03146MPN domain-containing protein. (550 aa)
OsI_03304DNA ligase. (1226 aa)
OsI_05193Uncharacterized protein. (421 aa)
OsI_05325Uncharacterized protein. (58 aa)
OsI_02335DNA helicase; Belongs to the MCM family. (725 aa)
OsI_03774Uncharacterized protein. (140 aa)
OsI_02640Uncharacterized protein. (361 aa)
OsI_02634Uncharacterized protein. (408 aa)
OsI_01180Uncharacterized protein. (127 aa)
OsI_01203S1-like domain-containing protein. (64 aa)
OsI_01213Uncharacterized protein. (327 aa)
OsI_04386RNB domain-containing protein. (774 aa)
OsI_00297Uncharacterized protein. (1240 aa)
OsI_00447AA_TRNA_LIGASE_II domain-containing protein. (719 aa)
OsI_00530Tower domain-containing protein. (1484 aa)
OsI_06267AAA domain-containing protein; Belongs to the AAA ATPase family. (400 aa)
MCM5DNA replication licensing factor MCM5; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (729 aa)
OsI_09429EXOSC1 domain-containing protein. (192 aa)
OsI_09546RPA_C domain-containing protein. (279 aa)
OsI_08089S1 motif domain-containing protein. (1030 aa)
OsI_08130Lysine--tRNA ligase. (603 aa)
OsI_08182Uncharacterized protein. (300 aa)
OsI_05633CSD_1 domain-containing protein. (131 aa)
OsI_06998AAA domain-containing protein; Belongs to the AAA ATPase family. (442 aa)
OsI_08509AA_TRNA_LIGASE_II domain-containing protein. (549 aa)
OsI_05793AA_TRNA_LIGASE_II domain-containing protein. (490 aa)
OsI_07319Rep_fac-A_C domain-containing protein. (431 aa)
OsI_08979DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1010 aa)
OsI_13610Uncharacterized protein. (517 aa)
OsI_11173AAA domain-containing protein; Belongs to the AAA ATPase family. (460 aa)
OsI_09834Uncharacterized protein; Belongs to the RNR ribonuclease family. (919 aa)
OsI_14191Uncharacterized protein. (647 aa)
OsI_14295Uncharacterized protein. (379 aa)
OsI_14307Uncharacterized protein. (215 aa)
OsI_14390Uncharacterized protein. (189 aa)
OsI_10164Uncharacterized protein. (101 aa)
OsI_11709OB domain-containing protein. (327 aa)
OsI_15081DNA_LIGASE_A3 domain-containing protein. (1981 aa)
OsI_15113Uncharacterized protein. (420 aa)
OsI_16671S1 domain-containing protein. (315 aa)
OsI_18045Uncharacterized protein. (145 aa)
OsI_17298DNA ligase. (1322 aa)
OsI_17370Ribosomal_S17_N domain-containing protein. (535 aa)
OsI_17372Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (161 aa)
OsI_16245Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1489 aa)
OsI_18077Uncharacterized protein. (134 aa)
OsI_18166Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (988 aa)
MCM8Probable DNA helicase MCM8; Probable DNA helicase that may play a role in DNA repair durin meiosis. (789 aa)
MCM3DNA replication licensing factor MCM3; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (770 aa)
OsI_18944SHS2_Rpb7-N domain-containing protein. (175 aa)
OsI_18955CSP domain-containing protein. (66 aa)
OsI_19075Uncharacterized protein. (238 aa)
OsI_20574Uncharacterized protein. (245 aa)
MCM6DNA replication licensing factor MCM6; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (830 aa)
OsI_24288Uncharacterized protein. (407 aa)
OsI_21690Uncharacterized protein. (197 aa)
OsI_23153tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (804 aa)
OsI_23219Rep_fac-A_C domain-containing protein. (667 aa)
MCM9Probable DNA helicase MCM9; Probable DNA helicase that may play a role in DNA repair during meiosis. (674 aa)
OsI_23597AAA domain-containing protein; Belongs to the AAA ATPase family. (423 aa)
OsI_23654AAA domain-containing protein; Belongs to the AAA ATPase family. (409 aa)
OsI_27049Uncharacterized protein. (469 aa)
OsI_25976Uncharacterized protein. (202 aa)
OsI_24654Rep_fac-A_C domain-containing protein. (298 aa)
OsI_26496Uncharacterized protein. (236 aa)
OsI_25208DUF223 domain-containing protein. (376 aa)
OsI_26733Eukaryotic translation initiation factor 5A. (173 aa)
OsI_25303Uncharacterized protein. (1848 aa)
OsI_25215Rep_fac-A_C domain-containing protein. (309 aa)
OsI_25453eIF-5a domain-containing protein. (92 aa)
OsI_28778CBM20 domain-containing protein. (1036 aa)
OsI_28022Uncharacterized protein. (705 aa)
OsI_29425Uncharacterized protein. (402 aa)
OsI_28229Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (159 aa)
OsI_30339Uncharacterized protein. (221 aa)
OsI_31194Rep_fac-A_C domain-containing protein. (391 aa)
OsI_33181Uncharacterized protein. (263 aa)
OsI_33537Uncharacterized protein. (400 aa)
OsI_34114DNA ligase. (627 aa)
OsI_35554TYR_PHOSPHATASE_2 domain-containing protein. (671 aa)
OsI_36121DNA replication licensing factor MCM2; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (961 aa)
MCM7DNA replication licensing factor MCM7; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (725 aa)
OsI_37750TYR_PHOSPHATASE_2 domain-containing protein. (665 aa)
OsI_37231Uncharacterized protein. (228 aa)
infATranslation initiation factor IF-1, chloroplastic; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (107 aa)
rps12-A30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity). (124 aa)
rpl2-A50S ribosomal protein L2, chloroplastic. (273 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.