(122 nodes) Pyridoxal phosphate-dependent transferase network (Oryza sativa Indica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_06890	Aminotran_1_2 domain-containing protein. (444 aa)
	OsI_17384	Probable gamma-aminobutyrate transaminase 2, mitochondrial; Transaminase that degrades gamma-amino butyric acid (GABA). Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (497 aa)
	OsI_17385	Gamma-aminobutyrate transaminase 1, mitochondrial; Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate as amino-group acceptor, but not 2-oxoglutarate. Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (516 aa)
	OsI_38022	Aminotran_5 domain-containing protein. (449 aa)
	OsI_37729	Aminotran_5 domain-containing protein. (624 aa)
	OsI_37113	Cyclic nucleotide-binding domain-containing protein. (1042 aa)
	OsI_36267	Aminotran_1_2 domain-containing protein. (488 aa)
	OsI_36226	Uncharacterized protein. (259 aa)
	OsI_36008	Aminotran_1_2 domain-containing protein. (225 aa)
	OsI_35497	NifS-like protein. (659 aa)
	OsI_34641	Aminotran_1_2 domain-containing protein. (450 aa)
	OsI_33936	Uncharacterized protein. (341 aa)
	OsI_33488	Uncharacterized protein. (163 aa)
	OsI_33418	Aminotran_1_2 domain-containing protein. (458 aa)
	OsI_33417	Aminotran_1_2 domain-containing protein. (483 aa)
	OsI_31489	Aminotran_1_2 domain-containing protein. (486 aa)
	OsI_31623	Aminotran_1_2 domain-containing protein. (447 aa)
	OsI_28220	Probable gamma-aminobutyrate transaminase 3, mitochondrial; Transaminase that degrades gamma-amino butyric acid (GABA). Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (510 aa)
	OsI_30127	Uncharacterized protein. (897 aa)
	OsI_30021	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (462 aa)
	OsI_28414	Uncharacterized protein. (821 aa)
	OsI_26881	Aminotran_1_2 domain-containing protein. (546 aa)
	OsI_25895	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (347 aa)
	OsI_22339	Uncharacterized protein. (380 aa)
	OsI_23308	Aspartate aminotransferase. (430 aa)
	OsI_21880	Uncharacterized protein. (403 aa)
	OsI_21629	Aminotran_1_2 domain-containing protein. (452 aa)
	OsI_21486	Aminotran_1_2 domain-containing protein. (520 aa)
	OsI_22884	Aminotran_1_2 domain-containing protein. (441 aa)
	OsI_24059	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. (824 aa)
	OsI_20323	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (480 aa)
	OsI_18617	Alliinase_C domain-containing protein. (438 aa)
	OsI_20056	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (571 aa)
	OsI_19753	Uncharacterized protein. (468 aa)
	OsI_19752	Aminotran_1_2 domain-containing protein. (162 aa)
	OsI_18305	Uncharacterized protein. (155 aa)
	OsI_18110	Methionine S-methyltransferase. (1084 aa)
	OsI_14710	Uncharacterized protein. (407 aa)
	OsI_16074	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (500 aa)
	OsI_16068	Uncharacterized protein. (235 aa)
	OsI_17386	Uncharacterized protein. (2239 aa)
	OsI_16646	Beta_elim_lyase domain-containing protein. (372 aa)
	OsI_13319	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (480 aa)
	OsI_13312	Uncharacterized protein. (313 aa)
	OsI_11784	Uncharacterized protein. (220 aa)
	OsI_10370	Aminotran_1_2 domain-containing protein. (450 aa)
	OsI_10280	Aminotran_1_2 domain-containing protein. (494 aa)
	OsI_11479	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
	OsI_14320	Uncharacterized protein. (579 aa)
	OsI_12787	Ornithine aminotransferase. (466 aa)
	OsI_11183	Aminotran_1_2 domain-containing protein. (464 aa)
	OsI_13440	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (513 aa)
	OsI_08645	Aminotran_1_2 domain-containing protein. (387 aa)
	OsI_05575	Uncharacterized protein. (663 aa)
	OsI_06871	Aminotran_1_2 domain-containing protein. (413 aa)
	OsI_06490	Aspartate aminotransferase. (432 aa)
	OsI_09291	Aspartate aminotransferase. (458 aa)
	OsI_00010	Uncharacterized protein. (539 aa)
	OsI_01098	Uncharacterized protein. (779 aa)
	OsI_03897	Uncharacterized protein. (515 aa)
	OsI_02393	Aminotran_1_2 domain-containing protein. (450 aa)
	OsI_05038	Aminotran_1_2 domain-containing protein. (489 aa)
	OsI_05034	Uncharacterized protein. (337 aa)
	OsI_01480	Uncharacterized protein. (253 aa)
	OsI_01479	Aminotran_5 domain-containing protein. (527 aa)
	OsI_38943	Uncharacterized protein. (830 aa)
	OsI_38072	SHMT domain-containing protein. (294 aa)
	OsI_38021	Aminotran_5 domain-containing protein. (198 aa)
	OsI_37733	Aminotran_5 domain-containing protein. (528 aa)
	OsI_36464	Aminotran_1_2 domain-containing protein. (429 aa)
	OsI_35999	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (347 aa)
	OsI_34329	Uncharacterized protein. (469 aa)
	OsI_34080	Aminotran_1_2 domain-containing protein. (412 aa)
	OsI_33483	Uncharacterized protein. (502 aa)
	OsI_33476	Uncharacterized protein. (486 aa)
	OsI_33474	Uncharacterized protein. (451 aa)
	OsI_33473	Uncharacterized protein. (473 aa)
	OsI_33472	Uncharacterized protein. (221 aa)
	OsI_33338	Uncharacterized protein. (487 aa)
	OsI_32510	Uncharacterized protein. (467 aa)
	OsI_30126	Uncharacterized protein. (660 aa)
	OsI_29783	Aminotran_5 domain-containing protein. (402 aa)
	OsI_29517	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (514 aa)
	OsI_27762	Uncharacterized protein. (523 aa)
	OsI_27760	Uncharacterized protein. (514 aa)
	OsI_24612	Aminotran_1_2 domain-containing protein. (485 aa)
	OsI_23687	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1031 aa)
	OsI_22888	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (531 aa)
	OsI_21550	Beta_elim_lyase domain-containing protein. (165 aa)
	OsI_20581	Uncharacterized protein. (583 aa)
	OsI_19452	Aminotran_1_2 domain-containing protein. (472 aa)
	OsI_18783	Aminotran_1_2 domain-containing protein. (358 aa)
	OsI_18618	Alliinase_C domain-containing protein. (265 aa)
	OsI_17596	N-acetyltransferase domain-containing protein. (355 aa)
	OsI_17585	Uncharacterized protein. (412 aa)
	OsI_17075	Aminotran_1_2 domain-containing protein. (483 aa)
	OsI_16070	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (484 aa)
	OsI_13658	Uncharacterized protein. (935 aa)
	ACC1	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. (487 aa)
	OsI_12793	Ornithine aminotransferase. (111 aa)
	OsI_10783	Aminotran_1_2 domain-containing protein. (485 aa)
	OsI_10669	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (492 aa)
	OsI_10205	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (486 aa)
	OsI_10089	Phosphoserine aminotransferase. (424 aa)
	OsI_09357	Aminotran_1_2 domain-containing protein. (481 aa)
	OsI_07573	Uncharacterized protein. (484 aa)
	OsI_06873	Aminotran_1_2 domain-containing protein. (439 aa)
	OsI_05556	Uncharacterized protein. (162 aa)
	OsI_05037	Aminotran_1_2 domain-containing protein. (497 aa)
	OsI_05036	Aminotran_1_2 domain-containing protein. (499 aa)
	OsI_04630	SHMT domain-containing protein. (600 aa)
	OsI_04601	Aminotran_1_2 domain-containing protein. (458 aa)
	OsI_03903	Uncharacterized protein. (113 aa)
	OsI_03821	Aspartate aminotransferase. (407 aa)
	OsI_03610	Aminotran_5 domain-containing protein. (616 aa)
	OsI_03523	Uncharacterized protein. (484 aa)
	OsI_03520	Uncharacterized protein. (485 aa)
	OsI_03474	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1033 aa)
	OsI_01484	Uncharacterized protein. (270 aa)
	OsI_00740	Aminotran_1_2 domain-containing protein. (461 aa)
	OsI_00629	Aminotran_1_2 domain-containing protein. (394 aa)
	OsI_00569	Alliinase_C domain-containing protein. (507 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACC1	OsI_00740	A2XLL2	A2WLM2	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_1_2 domain-containing protein.	0.742
ACC1	OsI_03474	A2XLL2	A2WUC5	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.446
ACC1	OsI_03821	A2XLL2	A2WVA6	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aspartate aminotransferase.	0.622
ACC1	OsI_06490	A2XLL2	B8AEL7	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aspartate aminotransferase.	0.622
ACC1	OsI_08645	A2XLL2	B8AHA9	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_1_2 domain-containing protein.	0.591
ACC1	OsI_09291	A2XLL2	B8AEH4	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aspartate aminotransferase.	0.622
ACC1	OsI_11784	A2XLL2	B8AQ99	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.461
ACC1	OsI_16646	A2XLL2	B8AS16	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Beta_elim_lyase domain-containing protein.	0.429
ACC1	OsI_17075	A2XLL2	A2XWP5	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_1_2 domain-containing protein.	0.875
ACC1	OsI_18783	A2XLL2	A2Y1A3	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_1_2 domain-containing protein.	0.673
ACC1	OsI_19452	A2XLL2	A2Y364	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_1_2 domain-containing protein.	0.748
ACC1	OsI_21486	A2XLL2	B8B2C1	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_1_2 domain-containing protein.	0.841
ACC1	OsI_21550	A2XLL2	A2Y915	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Beta_elim_lyase domain-containing protein.	0.429
ACC1	OsI_21880	A2XLL2	B8B3G3	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.461
ACC1	OsI_22339	A2XLL2	B8B4G5	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.461
ACC1	OsI_23308	A2XLL2	B8B3J3	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aspartate aminotransferase.	0.622
ACC1	OsI_23687	A2XLL2	A2YEZ0	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.446
ACC1	OsI_29783	A2XLL2	A2YWR6	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_5 domain-containing protein.	0.658
ACC1	OsI_33472	A2XLL2	A2Z701	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.461
ACC1	OsI_33473	A2XLL2	A2Z702	1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.461

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