133 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_38994	Uncharacterized protein. (423 aa)
	OsI_39024	TPR_REGION domain-containing protein. (324 aa)
	OsI_39253	Uncharacterized protein. (479 aa)
	ycf3	Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits. (170 aa)
	OsI_07291	Uncharacterized protein. (391 aa)
	OsI_07282	TPR_REGION domain-containing protein. (618 aa)
	OsI_07281	ANK_REP_REGION domain-containing protein. (454 aa)
	OsI_06619	Uncharacterized protein. (1770 aa)
	OsI_06345	Uncharacterized protein. (697 aa)
	OsI_02866	TPR_REGION domain-containing protein. (563 aa)
	OsI_02276	Uncharacterized protein. (494 aa)
	OsI_02191	Peptidylprolyl isomerase. (460 aa)
	OsI_01356	Uncharacterized protein. (988 aa)
	OsI_00914	TPR_REGION domain-containing protein. (601 aa)
	OsI_00609	ANK_REP_REGION domain-containing protein. (435 aa)
	OsI_27700	TPR_REGION domain-containing protein. (813 aa)
	OsI_25780	Uncharacterized protein. (1889 aa)
	OsI_25106	Uncharacterized protein. (886 aa)
	OsI_25059	Uncharacterized protein. (335 aa)
	OsI_24169	Uncharacterized protein. (435 aa)
	OsI_23741	Uncharacterized protein. (725 aa)
	SYUU0025A11.33	Putative Heat shock protein STI. (430 aa)
	OsI_20545	TPR_REGION domain-containing protein. (284 aa)
	OsI_18833	TPR_REGION domain-containing protein. (483 aa)
	OsI_17892	TPR_REGION domain-containing protein. (250 aa)
	OsI_16851	Uncharacterized protein. (511 aa)
	OsI_15989	TPR_REGION domain-containing protein. (392 aa)
	OsI_13023	Uncharacterized protein. (447 aa)
	OsI_11499	TPR_REGION domain-containing protein. (492 aa)
	OsI_11257	TPR_REGION domain-containing protein. (620 aa)
	OsI_11218	J domain-containing protein. (668 aa)
	OsI_10852	Uncharacterized protein. (848 aa)
	OsI_10178	Uncharacterized protein. (536 aa)
	OsI_10155	TPR_REGION domain-containing protein. (315 aa)
	OsI_10036	Uncharacterized protein. (556 aa)
	OsI_09478	Uncharacterized protein. (621 aa)
	OsI_08974	Uncharacterized protein. (588 aa)
	OsI_07850	TPR_REGION domain-containing protein. (319 aa)
	OsI_28334	Uncharacterized protein. (384 aa)
	OsI_28603	Pterin-binding domain-containing protein. (167 aa)
	OsI_30440	TPR_REGION domain-containing protein. (872 aa)
	OsI_30481	Uncharacterized protein. (787 aa)
	OsI_32198	TPR_REGION domain-containing protein. (513 aa)
	OsI_32348	Uncharacterized protein. (685 aa)
	OsI_33999	TPR_REGION domain-containing protein. (756 aa)
	OsI_34095	TPR_REGION domain-containing protein. (344 aa)
	OsI_34194	Uncharacterized protein. (1039 aa)
	OsI_36620	Uncharacterized protein. (886 aa)
	OsI_39261	Uncharacterized protein. (439 aa)
	OsI_04846	Uncharacterized protein. (599 aa)
	OsI_01883	TPR_REGION domain-containing protein. (455 aa)
	OsI_04909	TPR_REGION domain-containing protein. (890 aa)
	OsI_02115	Uncharacterized protein. (431 aa)
	OsI_05436	Uncharacterized protein. (458 aa)
	OsI_02873	Uncharacterized protein. (909 aa)
	OsI_02921	Uncharacterized protein. (367 aa)
	OsI_00579	Uncharacterized protein. (923 aa)
	OsI_06297	TPR_REGION domain-containing protein. (215 aa)
	OsI_06225	Uncharacterized protein. (473 aa)
	OsI_08254	Uncharacterized protein. (595 aa)
	OsI_08332	TPR_REGION domain-containing protein. (597 aa)
	OsI_05534	TPR_REGION domain-containing protein. (599 aa)
	OsI_05447	TPR_REGION domain-containing protein. (350 aa)
	OsI_08639	Uncharacterized protein. (711 aa)
	OsI_08701	Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria; Belongs to the CLU family. (1426 aa)
	OsI_07263	TPR_REGION domain-containing protein. (1004 aa)
	OsI_07270	Peptidylprolyl isomerase. (600 aa)
	OsI_07287	Uncharacterized protein. (260 aa)
	OsI_07274	Uncharacterized protein. (507 aa)
	OsI_07280	Uncharacterized protein. (425 aa)
	OsI_08982	TPR_REGION domain-containing protein. (613 aa)
	OsI_09026	Uncharacterized protein. (399 aa)
	OsI_07631	TPR_REGION domain-containing protein. (307 aa)
	OsI_09189	Uncharacterized protein. (927 aa)
	OsI_13520	TPR_REGION domain-containing protein. (336 aa)
	OsI_10676	TPR_REGION domain-containing protein. (1316 aa)
	OsI_12235	Uncharacterized protein. (640 aa)
	OsI_11136	BTB domain-containing protein. (721 aa)
	OsI_12647	TPR_REGION domain-containing protein. (142 aa)
	OsI_12649	Uncharacterized protein. (397 aa)
	OsI_09929	Uncharacterized protein. (692 aa)
	OsI_13026	Uncharacterized protein. (913 aa)
	OsI_13027	Uncharacterized protein. (431 aa)
	OsI_13028	Uncharacterized protein. (384 aa)
	OsI_13064	TPR_REGION domain-containing protein. (1859 aa)
	OsI_10410	TPR_REGION domain-containing protein. (622 aa)
	OsI_11710	Peptidylprolyl isomerase. (632 aa)
	OsI_13214	TPR_REGION domain-containing protein. (586 aa)
	OsI_10464	Uncharacterized protein. (678 aa)
	OsI_15179	TPR_REGION domain-containing protein. (221 aa)
	OsI_18030	TPR_REGION domain-containing protein. (481 aa)
	OsI_15470	Peptidylprolyl isomerase. (585 aa)
	OsI_16799	Uncharacterized protein. (574 aa)
	OsI_16848	Uncharacterized protein. (1300 aa)
	OsI_17407	TPR_REGION domain-containing protein. (297 aa)
	OsI_17662	Uncharacterized protein. (1720 aa)
	OsI_18097	Uncharacterized protein. (393 aa)
	OsI_18109	Uncharacterized protein. (278 aa)
	OsI_19540	Uncharacterized protein. (1013 aa)
	OsI_21184	TPR_REGION domain-containing protein. (695 aa)
	OsI_18314	TPR_REGION domain-containing protein. (408 aa)
	OsI_19729	Uncharacterized protein. (839 aa)
	OsI_18471	Uncharacterized protein. (561 aa)
	OsI_18876	TPR_REGION domain-containing protein. (481 aa)
	OsI_21792	Uncharacterized protein. (805 aa)
	OsI_21764	Uncharacterized protein. (427 aa)
	OsI_21848	TPR_REGION domain-containing protein. (586 aa)
	OsI_22166	Uncharacterized protein. (428 aa)
	OsI_25661	TPR_REGION domain-containing protein. (434 aa)
	OsI_25869	TPR_REGION domain-containing protein. (876 aa)
	OsI_25970	Uncharacterized protein. (1174 aa)
	OsI_24660	Uncharacterized protein. (1011 aa)
	OsI_24724	Uncharacterized protein. (469 aa)
	OsI_24984	TPR_REGION domain-containing protein. (547 aa)
	OsI_25026	TPR_REGION domain-containing protein. (83 aa)
	OsI_29964	Peptidylprolyl isomerase. (583 aa)
	OsI_30264	Uncharacterized protein. (947 aa)
	OsI_27581	Uncharacterized protein. (273 aa)
	OsI_29764	TPR_REGION domain-containing protein. (750 aa)
	OsI_30428	Uncharacterized protein. (428 aa)
	OsI_30429	Uncharacterized protein. (286 aa)
	OsI_30431	Uncharacterized protein. (428 aa)
	OsI_31300	Uncharacterized protein. (776 aa)
	OsI_33911	TPR_REGION domain-containing protein. (291 aa)
	OsI_34249	Uncharacterized protein. (816 aa)
	OsI_34250	TPR_REGION domain-containing protein. (252 aa)
	OsI_34556	TPR_REGION domain-containing protein. (1014 aa)
	OsI_35103	Peptidylprolyl isomerase. (375 aa)
	OsI_35748	Uncharacterized protein. (931 aa)
	OsI_37454	Peptidylprolyl isomerase. (370 aa)
	OsI_38750	Uncharacterized protein. (645 aa)
	OsI_38816	TPR_REGION domain-containing protein. (879 aa)
	OsI_38995	Uncharacterized protein. (413 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_00579	OsI_00609	B8ADH1	A2WL96	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.675
OsI_00579	OsI_02191	B8ADH1	A2WQQ6	Uncharacterized protein.	Peptidylprolyl isomerase.	0.471
OsI_00579	OsI_02866	B8ADH1	A2WSM2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.707
OsI_00579	OsI_02921	B8ADH1	B8ABY6	Uncharacterized protein.	Uncharacterized protein.	0.687
OsI_00579	OsI_04909	B8ADH1	B8A854	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.407
OsI_00579	OsI_07263	B8ADH1	B8AHZ9	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.407
OsI_00579	OsI_07270	B8ADH1	B8AI01	Uncharacterized protein.	Peptidylprolyl isomerase.	0.471
OsI_00579	OsI_07274	B8ADH1	B8AIC5	Uncharacterized protein.	Uncharacterized protein.	0.678
OsI_00579	OsI_07280	B8ADH1	B8AIC8	Uncharacterized protein.	Uncharacterized protein.	0.667
OsI_00579	OsI_07281	B8ADH1	A2X508	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.673
OsI_00579	OsI_07282	B8ADH1	A2X509	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.646
OsI_00579	OsI_07287	B8ADH1	B8AI91	Uncharacterized protein.	Uncharacterized protein.	0.646
OsI_00579	OsI_07291	B8ADH1	A2X521	Uncharacterized protein.	Uncharacterized protein.	0.682
OsI_00579	OsI_08332	B8ADH1	B8AG45	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.780
OsI_00579	OsI_08982	B8ADH1	B8AIT1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.577
OsI_00579	OsI_09026	B8ADH1	B8AIU6	Uncharacterized protein.	Uncharacterized protein.	0.578
OsI_00579	OsI_09189	B8ADH1	B8AJK0	Uncharacterized protein.	Uncharacterized protein.	0.647
OsI_00579	OsI_10676	B8ADH1	B8AK21	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.919
OsI_00579	OsI_11710	B8ADH1	B8AQ71	Uncharacterized protein.	Peptidylprolyl isomerase.	0.448
OsI_00579	OsI_12647	B8ADH1	B8AMK9	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.646

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