27 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_23921	Uncharacterized protein. (153 aa)
	OsI_31820	Ubiquitin-like domain-containing protein. (140 aa)
	OsI_05955	Uncharacterized protein. (457 aa)
	OsI_34137	Uncharacterized protein. (162 aa)
	OsI_34511	Ubiquitin-like domain-containing protein. (81 aa)
	OsI_31818	Ubiquitin-like domain-containing protein. (139 aa)
	OsI_28070	Uncharacterized protein. (254 aa)
	OsI_28061	Ubiquitin-like domain-containing protein. (302 aa)
	OsI_26099	Ubiquitin-like domain-containing protein. (983 aa)
	OsI_24083	Uncharacterized protein. (240 aa)
	OsI_34140	Ubiquitin-like domain-containing protein. (81 aa)
	OsI_01687	Ubiquitin-like domain-containing protein. (155 aa)
	OsI_03024	Uncharacterized protein. (154 aa)
	OsI_03026	Uncharacterized protein. (152 aa)
	OsI_10655	Ubiquitin-like domain-containing protein. (171 aa)
	OsI_10821	Ubiquitin-like domain-containing protein. (136 aa)
	OsI_17529	Uncharacterized protein. (381 aa)
	OsI_20535	Uncharacterized protein. (381 aa)
	OsI_26040	Ubiquitin-like domain-containing protein. (139 aa)
	OsI_28067	Ubiquitin-like domain-containing protein. (253 aa)
	OsI_31396	Uncharacterized protein. (153 aa)
	OsI_31610	Ubiquitin-like domain-containing protein. (140 aa)
	OsI_20205	Ubiquitin-like domain-containing protein. (83 aa)
	OsI_09858	Uncharacterized protein. (534 aa)
	OsI_32449	Ubiquitin-like domain-containing protein. (129 aa)
	OsI_24195	Uncharacterized protein. (223 aa)
	OsI_24193	Uncharacterized protein. (533 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_01687	OsI_03024	A2WPB5	A2WT34	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.950
OsI_01687	OsI_03026	A2WPB5	A2WT36	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.765
OsI_01687	OsI_05955	A2WPB5	B8AI68	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.967
OsI_01687	OsI_09858	A2WPB5	B8AME3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.905
OsI_01687	OsI_10655	A2WPB5	A2XEA1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.995
OsI_01687	OsI_10821	A2WPB5	A2XEQ8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.978
OsI_01687	OsI_17529	A2WPB5	A2XXV3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
OsI_01687	OsI_20535	A2WPB5	A2Y6A4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
OsI_01687	OsI_23921	A2WPB5	B8B0S9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.950
OsI_01687	OsI_24083	A2WPB5	B8B180	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.968
OsI_01687	OsI_24193	A2WPB5	B8B1H0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.967
OsI_01687	OsI_24195	A2WPB5	B8B1H2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
OsI_01687	OsI_26040	A2WPB5	A2YLE5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.995
OsI_01687	OsI_26099	A2WPB5	B8B6E2	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.416
OsI_01687	OsI_28061	A2WPB5	B8BBD9	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.854
OsI_01687	OsI_28070	A2WPB5	B8BBE4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.848
OsI_01687	OsI_31396	A2WPB5	A2Z1B6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.950
OsI_01687	OsI_31610	A2WPB5	A2Z1X7	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.995
OsI_01687	OsI_31818	A2WPB5	B8BCU7	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.978
OsI_01687	OsI_31820	A2WPB5	B8BCU8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.978

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