STRINGSTRING
H2B.9 H2B.9 H2B.4 H2B.4 OsI_00433 OsI_00433 OsI_00434 OsI_00434 H2B.10 H2B.10 H2B.8 H2B.8 H2B.7 H2B.7 H2B.6 H2B.6 H2B.5 H2B.5 OsI_01354 OsI_01354 OsI_01687 OsI_01687 OsI_02095 OsI_02095 OsI_02995 OsI_02995 H2B.11 H2B.11 OsI_04888 OsI_04888 OsI_09125 OsI_09125 OsI_010709 OsI_010709 OsI_11393 OsI_11393 OsI_14786 OsI_14786 OsI_15683 OsI_15683 OsI_15689 OsI_15689 OsI_15691 OsI_15691 OsI_17541 OsI_17541 OsI_18614 OsI_18614 OsI_18803 OsI_18803 OsI_21098 OsI_21098 OsI_23741 OsI_23741 OsI_23994 OsI_23994 OsI_24169 OsI_24169 TRXH TRXH OsI_25217 OsI_25217 OsI_25975 OsI_25975 OsI_26482 OsI_26482 OsI_27372 OsI_27372 OsI_28030 OsI_28030 OsI_28067 OsI_28067 OsI_29059 OsI_29059 H2B.2 H2B.2 OsI_32377 OsI_32377 OsI_32404 OsI_32404 OsI_38262 OsI_38262 OsI_38263 OsI_38263 OsI_04070 OsI_04070 OsI_00057 OsI_00057 OsI_00441 OsI_00441 OsI_00557 OsI_00557 OsI_09206 OsI_09206 OsI_09468 OsI_09468 OsI_08332 OsI_08332 OsI_07303 OsI_07303 H2B.3 H2B.3 OsI_10676 OsI_10676 OsI_13929 OsI_13929 OsI_11204 OsI_11204 OsI_10076 OsI_10076 OsI_10175 OsI_10175 OsI_10260 OsI_10260 OsI_15690 OsI_15690 OsI_14785 OsI_14785 OsI_16372 OsI_16372 OsI_20908 OsI_20908 OsI_19594 OsI_19594 OsI_18471 OsI_18471 OsI_20205 OsI_20205 OsI_20231 OsI_20231 OsI_20252 OsI_20252 OsI_20355 OsI_20355 OsI_20471 OsI_20471 OsI_20562 OsI_20562 OsI_24031 OsI_24031 OsI_25732 OsI_25732 OsI_27178 OsI_27178 OsI_24618 OsI_24618 OsI_27737 OsI_27737 OsI_27742 OsI_27742 OsI_28027 OsI_28027 OsI_28202 OsI_28202 OsI_29697 OsI_29697 OsI_30807 OsI_30807 OsI_32405 OsI_32405 OsI_32441 OsI_32441 OsI_33899 OsI_33899 NBS1 NBS1 OsI_34140 OsI_34140 OsI_39198 OsI_39198 H0410G08.11 H0410G08.11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2B.9Histone H2B.9; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (152 aa)
H2B.4Histone H2B.4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
OsI_00433F-box domain-containing protein. (384 aa)
OsI_00434F-box domain-containing protein. (373 aa)
H2B.10Histone H2B.10; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
H2B.8Histone H2B.8; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
H2B.7Histone H2B.7; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
H2B.6Histone H2B.6; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
H2B.5Histone H2B.5; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (155 aa)
OsI_01354UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (135 aa)
OsI_01687Ubiquitin-like domain-containing protein. (155 aa)
OsI_02095Histone domain-containing protein; Belongs to the histone H2B family. (102 aa)
OsI_02995Uncharacterized protein. (360 aa)
H2B.11Histone H2B.11; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (139 aa)
OsI_04888Thioredoxin domain-containing protein. (187 aa)
OsI_09125Uncharacterized protein. (167 aa)
OsI_010709Histone H2B.1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (152 aa)
OsI_11393Thioredoxin domain-containing protein. (279 aa)
OsI_14786VEFS-Box domain-containing protein. (128 aa)
OsI_15683GLTSCR1 domain-containing protein. (459 aa)
OsI_15689Uncharacterized protein. (693 aa)
OsI_15691GLTSCR1 domain-containing protein. (302 aa)
OsI_17541Thioredoxin domain-containing protein. (133 aa)
OsI_18614Thioredoxin; Belongs to the thioredoxin family. (132 aa)
OsI_18803Thioredoxin domain-containing protein. (224 aa)
OsI_21098Uncharacterized protein. (370 aa)
OsI_23741Uncharacterized protein. (725 aa)
OsI_23994UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (296 aa)
OsI_24169Uncharacterized protein. (435 aa)
TRXHThioredoxin H-type; Participates in various redox reactions through the reversible oxidation of the active center dithiol to a disulfide. The H form is known to activate a number of cytosolic enzymes (By similarity); Belongs to the thioredoxin family. Plant H-type subfamily. (122 aa)
OsI_25217Thioredoxin domain-containing protein. (138 aa)
OsI_25975Thioredoxin domain-containing protein. (299 aa)
OsI_26482Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (266 aa)
OsI_27372Thioredoxin domain-containing protein. (279 aa)
OsI_28030RNase H domain-containing protein. (351 aa)
OsI_28067Ubiquitin-like domain-containing protein. (253 aa)
OsI_29059Thioredoxin-like protein CITRX, chloroplastic; Probable thiol-disulfide oxidoreductase that may play a role in proper chloroplast development. May be involved in cell death and defense responses; Belongs to the thioredoxin family. Plant CITRX-type subfamily. (189 aa)
H2B.2Histone H2B.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (150 aa)
OsI_32377Thioredoxin domain-containing protein. (125 aa)
OsI_32404Thioredoxin domain-containing protein. (117 aa)
OsI_38262GLTSCR1 domain-containing protein. (427 aa)
OsI_38263Uncharacterized protein. (135 aa)
OsI_04070RING-type domain-containing protein. (491 aa)
OsI_00057Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2732 aa)
OsI_00441F-box domain-containing protein. (431 aa)
OsI_00557Thioredoxin domain-containing protein. (167 aa)
OsI_09206Uncharacterized protein. (706 aa)
OsI_09468Thioredoxin domain-containing protein. (188 aa)
OsI_08332TPR_REGION domain-containing protein. (597 aa)
OsI_07303Zinc-hook domain-containing protein. (1323 aa)
H2B.3Histone H2B.3; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
OsI_10676TPR_REGION domain-containing protein. (1316 aa)
OsI_13929Thioredoxin; Belongs to the thioredoxin family. (134 aa)
OsI_11204RING-type domain-containing protein. (84 aa)
OsI_10076Thioredoxin domain-containing protein. (244 aa)
OsI_10175Thioredoxin domain-containing protein. (232 aa)
OsI_10260Uncharacterized protein. (309 aa)
OsI_15690GLTSCR1 domain-containing protein. (341 aa)
OsI_14785Uncharacterized protein. (488 aa)
OsI_16372CULLIN_2 domain-containing protein; Belongs to the cullin family. (864 aa)
OsI_20908Uncharacterized protein. (188 aa)
OsI_19594APC1_C domain-containing protein. (1799 aa)
OsI_18471Uncharacterized protein. (561 aa)
OsI_20205Ubiquitin-like domain-containing protein. (83 aa)
OsI_20231Histone H2B; Belongs to the histone H2B family. (95 aa)
OsI_20252PWWP domain-containing protein. (1254 aa)
OsI_20355Thioredoxin domain-containing protein. (213 aa)
OsI_20471RING-type domain-containing protein. (451 aa)
OsI_20562Thioredoxin; Belongs to the thioredoxin family. (121 aa)
OsI_24031Thioredoxin domain-containing protein. (172 aa)
OsI_25732RING-type domain-containing protein. (84 aa)
OsI_27178Thioredoxin reductase. (514 aa)
OsI_24618Uncharacterized protein. (142 aa)
OsI_27737WD_REPEATS_REGION domain-containing protein. (376 aa)
OsI_27742Uncharacterized protein. (324 aa)
OsI_28027Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (589 aa)
OsI_28202F-box domain-containing protein. (304 aa)
OsI_29697Histone H2B; Belongs to the histone H2B family. (56 aa)
OsI_30807VEFS-Box domain-containing protein. (379 aa)
OsI_32405Thioredoxin domain-containing protein. (109 aa)
OsI_32441Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (934 aa)
OsI_33899RNase H domain-containing protein. (323 aa)
NBS1Nijmegen breakage syndrome 1 protein; Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis. (560 aa)
OsI_34140Ubiquitin-like domain-containing protein. (81 aa)
OsI_39198ANAPC5 domain-containing protein. (911 aa)
H0410G08.11Double-strand break repair protein MRE11; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. Belongs to the MRE11/RAD32 family. (705 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.