31 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_28897	Uncharacterized protein. (360 aa)
	OsI_34140	Ubiquitin-like domain-containing protein. (81 aa)
	OsI_01687	Ubiquitin-like domain-containing protein. (155 aa)
	OsI_04205	TOG domain-containing protein. (425 aa)
	SIP9	SKIP interacting protein 9. (428 aa)
	OsI_05756	Uncharacterized protein. (103 aa)
	OsI_09267	CYTOSOL_AP domain-containing protein. (598 aa)
	OsI_26171	Uncharacterized protein. (160 aa)
	OsI_26172	Uncharacterized protein. (154 aa)
	OsI_26173	Uncharacterized protein. (162 aa)
	OsI_26178	Uncharacterized protein. (171 aa)
	OsI_26180	Uncharacterized protein. (162 aa)
	OsI_26181	Uncharacterized protein. (160 aa)
	OsI_26184	Uncharacterized protein. (152 aa)
	OsI_26186	Uncharacterized protein. (160 aa)
	OsI_26213	Uncharacterized protein. (157 aa)
	OsI_28067	Ubiquitin-like domain-containing protein. (253 aa)
	OsI_30625	WD_REPEATS_REGION domain-containing protein. (990 aa)
	OsI_31364	Uncharacterized protein. (517 aa)
	OsI_38175	CYTOSOL_AP domain-containing protein. (525 aa)
	OsI_04204	Uncharacterized protein. (1941 aa)
	OsI_00688	WD_REPEATS_REGION domain-containing protein. (512 aa)
	OsI_06252	Uncharacterized protein. (1145 aa)
	OsI_09018	Uncharacterized protein. (1376 aa)
	OsI_12660	Uncharacterized protein. (185 aa)
	OsI_20205	Ubiquitin-like domain-containing protein. (83 aa)
	OsI_21951	HAUS-augmin3 domain-containing protein. (617 aa)
	OsI_25166	HAUS-augmin3 domain-containing protein. (602 aa)
	OsI_28441	Uncharacterized protein. (236 aa)
	OsI_30016	WD_REPEATS_REGION domain-containing protein. (528 aa)
	OsI_28364	Uncharacterized protein. (326 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_00688	OsI_01687	B8ADM8	A2WPB5	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.840
OsI_00688	OsI_20205	B8ADM8	B8AYV2	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.840
OsI_00688	OsI_28067	B8ADM8	A2YRX0	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.840
OsI_00688	OsI_34140	B8ADM8	B8BHM2	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.840
OsI_01687	OsI_00688	A2WPB5	B8ADM8	Ubiquitin-like domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.840
OsI_01687	OsI_09267	A2WPB5	A2XAI5	Ubiquitin-like domain-containing protein.	CYTOSOL_AP domain-containing protein.	0.692
OsI_01687	OsI_30016	A2WPB5	B8B932	Ubiquitin-like domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.618
OsI_01687	OsI_34140	A2WPB5	B8BHM2	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.876
OsI_01687	OsI_38175	A2WPB5	A2ZK22	Ubiquitin-like domain-containing protein.	CYTOSOL_AP domain-containing protein.	0.692
OsI_04204	OsI_21951	B8ABA5	B8B3R0	Uncharacterized protein.	HAUS-augmin3 domain-containing protein.	0.652
OsI_04204	OsI_25166	B8ABA5	B8B7W7	Uncharacterized protein.	HAUS-augmin3 domain-containing protein.	0.667
OsI_04204	OsI_30016	B8ABA5	B8B932	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.747
OsI_04205	OsI_30016	A2WWC3	B8B932	TOG domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.747
OsI_06252	OsI_30016	B8ADS6	B8B932	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.747
OsI_09018	OsI_30016	B8AIU2	B8B932	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.747
OsI_09018	OsI_30625	B8AIU2	A2YZ57	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.417
OsI_09267	OsI_01687	A2XAI5	A2WPB5	CYTOSOL_AP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.692
OsI_09267	OsI_20205	A2XAI5	B8AYV2	CYTOSOL_AP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.692
OsI_09267	OsI_28067	A2XAI5	A2YRX0	CYTOSOL_AP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.692
OsI_09267	OsI_28364	A2XAI5	B8BC74	CYTOSOL_AP domain-containing protein.	Uncharacterized protein.	0.615

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