STRINGSTRING
OsI_13308 OsI_13308 OsI_11566 OsI_11566 OsI_11561 OsI_11561 OsI_14482 OsI_14482 OsI_14481 OsI_14481 OsI_12927 OsI_12927 OsI_12702 OsI_12702 OsI_14033 OsI_14033 OsI_13821 OsI_13821 OsI_10577 OsI_10577 OsI_06217 OsI_06217 OsI_08886 OsI_08886 OsI_07319 OsI_07319 OsI_05816 OsI_05816 OsI_09388 OsI_09388 OsI_06283 OsI_06283 OsI_04485 OsI_04485 OsI_02983 OsI_02983 OsI_01321 OsI_01321 OsI_04360 OsI_04360 OsI_02895 OsI_02895 OsI_04070 OsI_04070 OsI_02544 OsI_02544 OsI_03713 OsI_03713 OsI_02204 OsI_02204 OsI_05060 OsI_05060 OsI_02036 OsI_02036 OsI_00787 OsI_00787 OsI_37804 OsI_37804 OsI_37160 OsI_37160 OsI_36414 OsI_36414 OsI_33842 OsI_33842 OsI_33701 OsI_33701 OsI_33558 OsI_33558 OsI_33423 OsI_33423 OsI_32967 OsI_32967 OsI_31295 OsI_31295 OsI_31292 OsI_31292 OsI_30057 OsI_30057 OsI_28541 OsI_28541 OsI_28020 OsI_28020 OsI_27847 OsI_27847 OsI_26581 OsI_26581 OsI_26580 OsI_26580 OsI_26579 OsI_26579 OsI_26576 OsI_26576 OsI_22688 OsI_22688 OsI_21263 OsI_21263 OsI_20842 OsI_20842 OsI_20760 OsI_20760 OsI_20371 OsI_20371 OsI_19942 OsI_19942 OsI_17376 OsI_17376 OsI_17363 OsI_17363 OsI_17318 OsI_17318 OsI_17093 OsI_17093 OsI_16639 OsI_16639 OsI_14707 OsI_14707 OsI_13819 OsI_13819 OsI_13450 OsI_13450 GATC GATC OsI_12053 OsI_12053 OsI_11565 OsI_11565 OsI_11202 OsI_11202 OsI_11178 OsI_11178 OsI_11070 OsI_11070 OsI_10866 OsI_10866 OsI_10574 OsI_10574 OsI_10518 OsI_10518 OsI_10206 OsI_10206 OsI_09788 OsI_09788 OsI_09678 OsI_09678 OsI_09344 OsI_09344 OsI_09147 OsI_09147 OsI_08583 OsI_08583 OsI_07370 OsI_07370 OsI_06457 OsI_06457 OsI_06162 OsI_06162 OsI_05813 OsI_05813 OsI_05697 OsI_05697 OsI_04943 OsI_04943 OsI_04942 OsI_04942 OsI_04463 OsI_04463 OsI_04340 OsI_04340 OsI_02985 OsI_02985 OsI_02952 OsI_02952 OsI_02447 OsI_02447 OsI_01971 OsI_01971 OsI_01322 OsI_01322 OsI_01320 OsI_01320 OsI_01045 OsI_01045 OsI_00350 OsI_00350 GH2 GH2 OsI_38246 OsI_38246 OsI_37949 OsI_37949 OsI_37805 OsI_37805 OsI_37599 OsI_37599 OsI_37598 OsI_37598 OsI_38467 OsI_38467 OsI_37371 OsI_37371 OsI_37352 OsI_37352 OsI_36879 OsI_36879 OsI_36590 OsI_36590 OsI_36551 OsI_36551 OsI_36413 OsI_36413 OsI_34973 OsI_34973 Os10g0536000 Os10g0536000 OsI_34031 OsI_34031 OsI_32774 OsI_32774 OsI_31294 OsI_31294 OsI_31293 OsI_31293 OsI_32422 OsI_32422 OsI_32188 OsI_32188 OsI_30637 OsI_30637 OsI_30422 OsI_30422 OsI_30360 OsI_30360 OsI_31617 OsI_31617 OsI_29840 OsI_29840 OsI_28022 OsI_28022 OsI_27885 OsI_27885 OsI_27550 OsI_27550 OsI_30216 OsI_30216 OsI_25208 OsI_25208 OsI_24654 OsI_24654 OsI_24559 OsI_24559 OsI_27422 OsI_27422 OsI_25696 OsI_25696 OsI_23710 OsI_23710 OsI_22377 OsI_22377 OsI_22364 OsI_22364 OsI_23551 OsI_23551 OsI_22031 OsI_22031 OsI_23219 OsI_23219 OsI_21801 OsI_21801 OsI_22909 OsI_22909 OsI_22677 OsI_22677 OsI_20471 OsI_20471 OsI_20370 OsI_20370 OsI_18272 OsI_18272 OsI_21247 OsI_21247 OsI_18166 OsI_18166 OsI_20982 OsI_20982 OsI_14623 OsI_14623
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_13308Uncharacterized protein. (813 aa)
OsI_11566Nop domain-containing protein. (657 aa)
OsI_11561Nuclear pore protein. (870 aa)
OsI_14482Uncharacterized protein. (181 aa)
OsI_14481PKS_ER domain-containing protein. (467 aa)
OsI_12927RanBD1 domain-containing protein. (416 aa)
OsI_12702Uncharacterized protein. (353 aa)
OsI_14033TOP4c domain-containing protein. (872 aa)
OsI_13821Uncharacterized protein. (614 aa)
OsI_10577Uncharacterized protein. (74 aa)
OsI_06217Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (360 aa)
OsI_08886TPR_MLP1_2 domain-containing protein. (2033 aa)
OsI_07319Rep_fac-A_C domain-containing protein. (431 aa)
OsI_05816Uncharacterized protein. (590 aa)
OsI_09388NAC domain-containing protein. (331 aa)
OsI_06283Uncharacterized protein. (1814 aa)
OsI_04485Nsp1_C domain-containing protein. (250 aa)
OsI_02983WD_REPEATS_REGION domain-containing protein. (281 aa)
OsI_01321Uncharacterized protein. (292 aa)
OsI_04360Uncharacterized protein. (397 aa)
OsI_02895WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (347 aa)
OsI_04070RING-type domain-containing protein. (491 aa)
OsI_02544Uncharacterized protein. (144 aa)
OsI_03713Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (649 aa)
OsI_02204Uncharacterized protein. (169 aa)
OsI_05060Uncharacterized protein. (157 aa)
OsI_02036Peptidase S59 domain-containing protein. (617 aa)
OsI_00787Nuclear pore complex protein NUP35. (327 aa)
OsI_37804Uncharacterized protein. (246 aa)
OsI_37160Uncharacterized protein. (567 aa)
OsI_36414NOP5NT domain-containing protein. (341 aa)
OsI_33842Uncharacterized protein. (178 aa)
OsI_33701PKS_ER domain-containing protein. (330 aa)
OsI_33558NAC domain-containing protein. (543 aa)
OsI_33423Uncharacterized protein. (1272 aa)
OsI_32967PKS_ER domain-containing protein. (354 aa)
OsI_31295PKS_ER domain-containing protein. (362 aa)
OsI_31292PKS_ER domain-containing protein. (359 aa)
OsI_30057Uncharacterized protein. (229 aa)
OsI_28541PKS_ER domain-containing protein. (356 aa)
OsI_28020WD_REPEATS_REGION domain-containing protein. (342 aa)
OsI_27847DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (916 aa)
OsI_26581Uncharacterized protein. (295 aa)
OsI_26580Uncharacterized protein. (327 aa)
OsI_26579Ubiquitin-like domain-containing protein. (110 aa)
OsI_26576Ubiquitin-like domain-containing protein. (110 aa)
OsI_22688Uncharacterized protein. (174 aa)
OsI_21263NAC domain-containing protein. (683 aa)
OsI_20842WPP domain-containing protein. (544 aa)
OsI_20760Uncharacterized protein. (269 aa)
OsI_20371Uncharacterized protein. (261 aa)
OsI_19942Uncharacterized protein. (212 aa)
OsI_17376ADH_zinc_N domain-containing protein. (75 aa)
OsI_17363PKS_ER domain-containing protein. (375 aa)
OsI_17318Uncharacterized protein. (858 aa)
OsI_17093UBIQUITIN_CONJUGAT_2 domain-containing protein. (160 aa)
OsI_16639NAC domain-containing protein. (278 aa)
OsI_14707Uncharacterized protein. (455 aa)
OsI_13819Uncharacterized protein. (745 aa)
OsI_13450Uncharacterized protein. (274 aa)
GATCGlutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). (153 aa)
OsI_12053Uncharacterized protein. (236 aa)
OsI_11565Nop domain-containing protein. (568 aa)
OsI_11202Uncharacterized protein. (792 aa)
OsI_11178Uncharacterized protein. (116 aa)
OsI_11070Uncharacterized protein. (135 aa)
OsI_10866RRM domain-containing protein. (324 aa)
OsI_10574PKS_ER domain-containing protein. (554 aa)
OsI_10518Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
OsI_10206Peptidase S59 domain-containing protein. (1005 aa)
OsI_09788UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
OsI_09678NAC domain-containing protein. (295 aa)
OsI_09344Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
OsI_09147Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (658 aa)
OsI_08583DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1486 aa)
OsI_07370Uncharacterized protein. (366 aa)
OsI_06457Uncharacterized protein. (219 aa)
OsI_06162Uncharacterized protein. (113 aa)
OsI_05813DUF5311 domain-containing protein. (1388 aa)
OsI_05697NAC domain-containing protein. (301 aa)
OsI_04943Small ubiquitin-related modifier. (100 aa)
OsI_04942Small ubiquitin-related modifier. (101 aa)
OsI_04463ELM2 domain-containing protein. (427 aa)
OsI_04340Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
OsI_02985Uncharacterized protein. (69 aa)
OsI_02952Uncharacterized protein. (410 aa)
OsI_02447Uncharacterized protein. (95 aa)
OsI_01971Ubiquitin-like domain-containing protein. (279 aa)
OsI_01322DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (647 aa)
OsI_01320Uncharacterized protein. (106 aa)
OsI_01045DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (408 aa)
OsI_00350Uncharacterized protein. (223 aa)
GH2Cinnamyl-alcohol dehydrogenase. (363 aa)
OsI_38246Uncharacterized protein. (1066 aa)
OsI_37949Uncharacterized protein. (306 aa)
OsI_37805RING-type domain-containing protein. (1218 aa)
OsI_37599Peptidase S59 domain-containing protein. (944 aa)
OsI_37598Peptidase S59 domain-containing protein. (989 aa)
OsI_38467Uncharacterized protein. (202 aa)
OsI_37371Uncharacterized protein. (92 aa)
OsI_37352WD_REPEATS_REGION domain-containing protein. (428 aa)
OsI_36879PKS_ER domain-containing protein. (354 aa)
OsI_36590NOP5NT domain-containing protein. (335 aa)
OsI_36551SMC_N domain-containing protein. (923 aa)
OsI_36413Uncharacterized protein. (247 aa)
OsI_34973WD_REPEATS_REGION domain-containing protein. (449 aa)
Os10g0536000SUMO E2 conjugating enzyme SCE1-like protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
OsI_34031NAC domain-containing protein. (271 aa)
OsI_32774Uncharacterized protein. (1837 aa)
OsI_31294PKS_ER domain-containing protein. (439 aa)
OsI_31293PKS_ER domain-containing protein. (436 aa)
OsI_32422Uncharacterized protein. (1924 aa)
OsI_32188Uncharacterized protein. (602 aa)
OsI_30637Retrotrans_gag domain-containing protein. (520 aa)
OsI_30422SMC_N domain-containing protein. (1039 aa)
OsI_30360Uncharacterized protein. (244 aa)
OsI_31617Uncharacterized protein. (470 aa)
OsI_29840Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (396 aa)
OsI_28022Uncharacterized protein. (705 aa)
OsI_27885NAC domain-containing protein. (738 aa)
OsI_27550Uncharacterized protein. (279 aa)
OsI_30216ULP_PROTEASE domain-containing protein. (675 aa)
OsI_25208DUF223 domain-containing protein. (376 aa)
OsI_24654Rep_fac-A_C domain-containing protein. (298 aa)
OsI_24559Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (96 aa)
OsI_27422Uncharacterized protein. (455 aa)
OsI_25696Nup54 domain-containing protein. (381 aa)
OsI_23710Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (401 aa)
OsI_22377ULP_PROTEASE domain-containing protein. (880 aa)
OsI_22364ULP_PROTEASE domain-containing protein. (585 aa)
OsI_23551Uncharacterized protein. (396 aa)
OsI_22031Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1088 aa)
OsI_23219Rep_fac-A_C domain-containing protein. (667 aa)
OsI_21801SP-RING-type domain-containing protein. (887 aa)
OsI_22909Uncharacterized protein. (181 aa)
OsI_22677Uncharacterized protein. (1657 aa)
OsI_20471RING-type domain-containing protein. (451 aa)
OsI_20370Uncharacterized protein. (210 aa)
OsI_18272Uncharacterized protein. (924 aa)
OsI_21247SMC_N domain-containing protein. (1179 aa)
OsI_18166Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (988 aa)
OsI_20982SP-RING-type domain-containing protein. (221 aa)
OsI_14623C2H2-type domain-containing protein. (478 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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