42 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_05968	Uncharacterized protein. (331 aa)
	OsI_38159	Uncharacterized protein. (149 aa)
	OsI_36193	ThiF domain-containing protein. (328 aa)
	OsI_33408	Uncharacterized protein. (704 aa)
	OsI_30722	Uncharacterized protein. (843 aa)
	OsI_30590	Uncharacterized protein. (149 aa)
	OsI_31756	Uncharacterized protein. (1350 aa)
	OsI_28708	F-box domain-containing protein. (352 aa)
	OsI_28699	F-box domain-containing protein. (202 aa)
	OsI_26664	SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. (634 aa)
	OsI_26301	Uncharacterized protein. (589 aa)
	OsI_25774	F-box domain-containing protein. (378 aa)
	OsI_23519	ULP_PROTEASE domain-containing protein. (1207 aa)
	OsI_21425	Uncharacterized protein. (89 aa)
	OsI_21310	Uncharacterized protein. (651 aa)
	OsI_21428	Uncharacterized protein. (390 aa)
	OsI_18409	ULP_PROTEASE domain-containing protein. (925 aa)
	OsI_17608	ULP_PROTEASE domain-containing protein. (1118 aa)
	OsI_13839	Uncharacterized protein. (786 aa)
	OsI_01861	ULP_PROTEASE domain-containing protein. (497 aa)
	OsI_01971	Ubiquitin-like domain-containing protein. (279 aa)
	OsI_04519	Uncharacterized protein. (128 aa)
	OsI_04942	Small ubiquitin-related modifier. (101 aa)
	OsI_04943	Small ubiquitin-related modifier. (100 aa)
	OsI_07214	ULP_PROTEASE domain-containing protein. (750 aa)
	OsI_11529	ULP_PROTEASE domain-containing protein. (418 aa)
	OsI_12003	ULP_PROTEASE domain-containing protein. (397 aa)
	OsI_20760	Uncharacterized protein. (269 aa)
	OsI_21427	ULP_PROTEASE domain-containing protein. (684 aa)
	OsI_26576	Ubiquitin-like domain-containing protein. (110 aa)
	OsI_26579	Ubiquitin-like domain-containing protein. (110 aa)
	OsI_26580	Uncharacterized protein. (327 aa)
	OsI_26581	Uncharacterized protein. (295 aa)
	OsI_30096	ULP_PROTEASE domain-containing protein. (610 aa)
	OsI_34007	ULP_PROTEASE domain-containing protein. (327 aa)
	OsI_38157	Uncharacterized protein. (61 aa)
	OsI_38161	Uncharacterized protein. (78 aa)
	OsI_38162	Uncharacterized protein. (207 aa)
	OsI_02133	Uncharacterized protein. (53 aa)
	OsI_02203	PMD domain-containing protein. (413 aa)
	OsI_04276	ULP_PROTEASE domain-containing protein. (778 aa)
	OsI_05970	ULP_PROTEASE domain-containing protein. (971 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_01861	OsI_01971	A2WPT1	A2WQ37	ULP_PROTEASE domain-containing protein.	Ubiquitin-like domain-containing protein.	0.714
OsI_01861	OsI_04942	A2WPT1	A2WYE0	ULP_PROTEASE domain-containing protein.	Small ubiquitin-related modifier.	0.714
OsI_01861	OsI_04943	A2WPT1	A2WYE1	ULP_PROTEASE domain-containing protein.	Small ubiquitin-related modifier.	0.714
OsI_01861	OsI_20760	A2WPT1	A2Y6V5	ULP_PROTEASE domain-containing protein.	Uncharacterized protein.	0.707
OsI_01861	OsI_26576	A2WPT1	A2YMW9	ULP_PROTEASE domain-containing protein.	Ubiquitin-like domain-containing protein.	0.714
OsI_01861	OsI_26579	A2WPT1	A2YMX1	ULP_PROTEASE domain-containing protein.	Ubiquitin-like domain-containing protein.	0.714
OsI_01861	OsI_26580	A2WPT1	A2YMX2	ULP_PROTEASE domain-containing protein.	Uncharacterized protein.	0.714
OsI_01861	OsI_26581	A2WPT1	A2YMX3	ULP_PROTEASE domain-containing protein.	Uncharacterized protein.	0.714
OsI_01971	OsI_01861	A2WQ37	A2WPT1	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.714
OsI_01971	OsI_02203	A2WQ37	B8A994	Ubiquitin-like domain-containing protein.	PMD domain-containing protein.	0.707
OsI_01971	OsI_04276	A2WQ37	B8ABM1	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.707
OsI_01971	OsI_04519	A2WQ37	A2WX77	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.707
OsI_01971	OsI_05968	A2WQ37	B8AI75	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.707
OsI_01971	OsI_05970	A2WQ37	B8AI77	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.707
OsI_01971	OsI_07214	A2WQ37	A2X4U2	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.707
OsI_01971	OsI_11529	A2WQ37	A2XGK8	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.714
OsI_01971	OsI_12003	A2WQ37	A2XHW0	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.714
OsI_01971	OsI_13839	A2WQ37	B8AL87	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.707
OsI_01971	OsI_17608	A2WQ37	B8AV70	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.707
OsI_01971	OsI_18409	A2WQ37	B8AXW4	Ubiquitin-like domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.707

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