STRINGSTRING
OsI_07812 OsI_07812 OsI_38058 OsI_38058 OsI_37774 OsI_37774 OsI_37531 OsI_37531 OsI_37123 OsI_37123 OsI_37120 OsI_37120 OsI_36715 OsI_36715 OsI_35924 OsI_35924 OsI_35651 OsI_35651 OsI_35166 OsI_35166 OsI_34610 OsI_34610 OsI_34556 OsI_34556 OsI_34232 OsI_34232 OsI_33622 OsI_33622 OsI_33620 OsI_33620 OsI_33617 OsI_33617 OsI_33614 OsI_33614 OsI_32948 OsI_32948 OsI_32947 OsI_32947 OsI_32708 OsI_32708 OsI_32689 OsI_32689 OsI_32688 OsI_32688 OsI_32687 OsI_32687 OsI_32685 OsI_32685 OsI_32605 OsI_32605 OsI_32600 OsI_32600 OsI_32469 OsI_32469 OsI_30553 OsI_30553 OsI_30425 OsI_30425 OsI_28028 OsI_28028 OsI_29417 OsI_29417 OsI_29373 OsI_29373 OsI_27848 OsI_27848 OsI_28955 OsI_28955 OsI_30272 OsI_30272 OsI_25049 OsI_25049 OsI_26499 OsI_26499 OsI_24480 OsI_24480 OsI_22653 OsI_22653 OsI_20400 OsI_20400 OsI_20399 OsI_20399 LSM5 LSM5 OsI_19459 OsI_19459 OsI_16206 OsI_16206 OsI_16244 OsI_16244 OsI_16218 OsI_16218 LSM1 LSM1 OsI_17368 OsI_17368 OsI_17225 OsI_17225 OsI_15663 OsI_15663 OsI_16671 OsI_16671 OsI_17929 OsI_17929 OsI_13424 OsI_13424 OsI_14382 OsI_14382 OsI_14380 OsI_14380 OsI_12833 OsI_12833 OsI_14228 OsI_14228 OsI_09977 OsI_09977 OsI_09834 OsI_09834 OsI_09623 OsI_09623 OsI_13472 OsI_13472 OsI_11979 OsI_11979 OsI_09184 OsI_09184 OsI_08979 OsI_08979 OsI_07364 OsI_07364 OsI_08870 OsI_08870 OsI_08745 OsI_08745 OsI_08237 OsI_08237 OsI_06851 OsI_06851 OsI_06838 OsI_06838 OsI_06571 OsI_06571 OsI_09429 OsI_09429 OsI_07813 OsI_07813 OsI_09281 OsI_09281 OsI_09350 OsI_09350 OsI_00145 OsI_00145 OsI_00851 OsI_00851 OsI_04418 OsI_04418 OsI_04417 OsI_04417 OsI_04386 OsI_04386 LSM4 LSM4 OsI_01143 OsI_01143 OsI_01133 OsI_01133 OsI_01132 OsI_01132 OsI_05378 OsI_05378 OsI_05277 OsI_05277 HOX33 HOX33 HOX9 HOX9 OsI_33618 OsI_33618 OsI_33615 OsI_33615 OsI_33613 OsI_33613 OsI_32709 OsI_32709 OsI_32707 OsI_32707 OsI_32684 OsI_32684 OsI_32639 OsI_32639 OsI_32610 OsI_32610 OsI_32603 OsI_32603 OsI_32598 OsI_32598 OsI_32595 OsI_32595 OsI_31373 OsI_31373 OsI_29374 OsI_29374 OsI_29179 OsI_29179 OsI_27604 OsI_27604 OsI_25526 OsI_25526 OsI_24481 OsI_24481 OsI_24355 OsI_24355 OsI_23258 OsI_23258 OsI_22801 OsI_22801 OsI_22670 OsI_22670 OsI_21774 OsI_21774 OsI_21555 OsI_21555 OsI_20893 OsI_20893 OsI_19235 OsI_19235 OsI_19175 OsI_19175 OsI_18436 OsI_18436 OsI_17989 OsI_17989 OsI_16765 OsI_16765 OsI_16687 OsI_16687 OsI_16441 OsI_16441 OsI_14936 OsI_14936 OsI_14290 OsI_14290 OsI_13789 OsI_13789 OsI_12837 OsI_12837 HOX32 HOX32 OsI_10553 OsI_10553 OsI_09700 OsI_09700 HOX10 HOX10 OsI_09397 OsI_09397 OsI_08201 OsI_08201 OsI_07612 OsI_07612 OsI_06865 OsI_06865 OsI_06407 OsI_06407 OsI_05937 OsI_05937 OsI_05839 OsI_05839 OsI_05643 OsI_05643 OsI_04749 OsI_04749 OsI_04736 OsI_04736 LSM3 LSM3 OsI_02545 OsI_02545 OsI_01141 OsI_01141 OsI_01140 OsI_01140 OsI_01139 OsI_01139 OsI_01136 OsI_01136 OsI_01135 OsI_01135 HOX29 HOX29
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_07812RING-type domain-containing protein. (100 aa)
OsI_38058Uncharacterized protein. (334 aa)
OsI_37774Uncharacterized protein. (439 aa)
OsI_37531Uncharacterized protein. (374 aa)
OsI_37123Uncharacterized protein. (1153 aa)
OsI_37120Uncharacterized protein. (987 aa)
OsI_36715Uncharacterized protein. (109 aa)
OsI_35924Uncharacterized protein. (306 aa)
OsI_35651Uncharacterized protein. (451 aa)
OsI_35166WH1 domain-containing protein. (332 aa)
OsI_34610Uncharacterized protein. (2367 aa)
OsI_34556TPR_REGION domain-containing protein. (1014 aa)
OsI_34232Uncharacterized protein; Belongs to the DEAD box helicase family. (524 aa)
OsI_33622Uncharacterized protein. (298 aa)
OsI_33620Uncharacterized protein. (683 aa)
OsI_33617Uncharacterized protein. (801 aa)
OsI_33614Uncharacterized protein. (86 aa)
OsI_32948Uncharacterized protein. (586 aa)
OsI_32947Uncharacterized protein. (195 aa)
OsI_32708Uncharacterized protein. (85 aa)
OsI_32689F-box domain-containing protein. (391 aa)
OsI_32688Uncharacterized protein. (238 aa)
OsI_32687F-box domain-containing protein. (386 aa)
OsI_32685F-box domain-containing protein. (415 aa)
OsI_32605Uncharacterized protein. (267 aa)
OsI_32600Uncharacterized protein. (184 aa)
OsI_32469NTP_transf_2 domain-containing protein. (553 aa)
OsI_30553Uncharacterized protein. (242 aa)
OsI_30425Uncharacterized protein. (850 aa)
OsI_28028Sm domain-containing protein. (98 aa)
OsI_29417Uncharacterized protein. (797 aa)
OsI_29373Uncharacterized protein. (602 aa)
OsI_27848Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (120 aa)
OsI_28955Uncharacterized protein. (514 aa)
OsI_30272Uncharacterized protein. (580 aa)
OsI_25049Uncharacterized protein. (363 aa)
OsI_26499Uncharacterized protein. (284 aa)
OsI_24480START domain-containing protein. (330 aa)
OsI_22653Uncharacterized protein. (1190 aa)
OsI_20400Uncharacterized protein. (174 aa)
OsI_20399NOT2_3_5 domain-containing protein. (656 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
OsI_19459F-box domain-containing protein. (405 aa)
OsI_16206RING-type domain-containing protein. (327 aa)
OsI_16244IGPS domain-containing protein. (931 aa)
OsI_16218Uncharacterized protein. (818 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (129 aa)
OsI_17368Uncharacterized protein. (326 aa)
OsI_17225Tr-type G domain-containing protein. (643 aa)
OsI_15663Sm domain-containing protein. (97 aa)
OsI_16671S1 domain-containing protein. (315 aa)
OsI_17929Uncharacterized protein. (700 aa)
OsI_13424NOT2_3_5 domain-containing protein. (625 aa)
OsI_14382RNase III domain-containing protein. (176 aa)
OsI_14380RNase_PH domain-containing protein. (238 aa)
OsI_12833Uncharacterized protein. (856 aa)
OsI_14228Uncharacterized protein. (492 aa)
OsI_09977Uncharacterized protein. (138 aa)
OsI_09834Uncharacterized protein; Belongs to the RNR ribonuclease family. (919 aa)
OsI_09623Uncharacterized protein. (1799 aa)
OsI_13472Uncharacterized protein. (136 aa)
OsI_11979Uncharacterized protein. (308 aa)
OsI_09184NOT2_3_5 domain-containing protein. (622 aa)
OsI_08979DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1010 aa)
OsI_07364Sm domain-containing protein. (97 aa)
OsI_08870Uncharacterized protein. (1065 aa)
OsI_08745Uncharacterized protein. (1163 aa)
OsI_08237Uncharacterized protein; Belongs to the DEAD box helicase family. (483 aa)
OsI_06851Uncharacterized protein. (81 aa)
OsI_06838Uncharacterized protein. (313 aa)
OsI_06571Uncharacterized protein. (475 aa)
OsI_09429EXOSC1 domain-containing protein. (192 aa)
OsI_07813Uncharacterized protein. (95 aa)
OsI_09281Uncharacterized protein. (295 aa)
OsI_09350Nudix hydrolase domain-containing protein. (321 aa)
OsI_00145RanBP2-type domain-containing protein. (780 aa)
OsI_00851RRM domain-containing protein. (787 aa)
OsI_04418Uncharacterized protein. (381 aa)
OsI_04417Uncharacterized protein. (557 aa)
OsI_04386RNB domain-containing protein. (774 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (147 aa)
OsI_01143DUF1618 domain-containing protein. (515 aa)
OsI_01133DUF1618 domain-containing protein. (441 aa)
OsI_01132DUF1618 domain-containing protein. (502 aa)
OsI_05378Uncharacterized protein. (385 aa)
OsI_05277CRM domain-containing protein. (415 aa)
HOX33Homeobox-leucine zipper protein HOX33; Probable transcription factor. (855 aa)
HOX9Homeobox-leucine zipper protein HOX9; Probable transcription factor. (840 aa)
OsI_33618Uncharacterized protein. (738 aa)
OsI_33615Uncharacterized protein. (656 aa)
OsI_33613Uncharacterized protein. (647 aa)
OsI_32709F-box domain-containing protein. (437 aa)
OsI_32707F-box domain-containing protein. (265 aa)
OsI_32684F-box domain-containing protein. (385 aa)
OsI_32639Uncharacterized protein. (292 aa)
OsI_32610Uncharacterized protein. (301 aa)
OsI_32603Uncharacterized protein. (274 aa)
OsI_32598F-box domain-containing protein. (429 aa)
OsI_32595Uncharacterized protein. (337 aa)
OsI_31373Uncharacterized protein. (280 aa)
OsI_29374Uncharacterized protein. (244 aa)
OsI_29179Uncharacterized protein. (487 aa)
OsI_27604Uncharacterized protein. (262 aa)
OsI_25526WH1 domain-containing protein. (382 aa)
OsI_24481Uncharacterized protein. (72 aa)
OsI_24355Uncharacterized protein; Belongs to the DEAD box helicase family. (426 aa)
OsI_23258Uncharacterized protein. (273 aa)
OsI_22801Uncharacterized protein. (267 aa)
OsI_22670CRM domain-containing protein. (304 aa)
OsI_21774DUF1618 domain-containing protein. (604 aa)
OsI_21555Uncharacterized protein. (335 aa)
OsI_20893Uncharacterized protein. (801 aa)
OsI_19235Uncharacterized protein. (431 aa)
OsI_19175DUF1618 domain-containing protein. (433 aa)
OsI_18436CRM domain-containing protein. (560 aa)
OsI_17989Uncharacterized protein. (329 aa)
OsI_16765Uncharacterized protein; Belongs to the DEAD box helicase family. (484 aa)
OsI_16687Uncharacterized protein. (893 aa)
OsI_16441CRM domain-containing protein. (479 aa)
OsI_14936Uncharacterized protein. (103 aa)
OsI_14290Uncharacterized protein. (260 aa)
OsI_13789Uncharacterized protein. (329 aa)
OsI_12837Uncharacterized protein. (853 aa)
HOX32Homeobox-leucine zipper protein HOX32; Probable transcription factor. (859 aa)
OsI_10553Uncharacterized protein. (573 aa)
OsI_09700DUF1618 domain-containing protein. (550 aa)
HOX10Homeobox-leucine zipper protein HOX10; Probable transcription factor. (839 aa)
OsI_09397NTP_transf_9 domain-containing protein. (131 aa)
OsI_08201Uncharacterized protein. (787 aa)
OsI_07612Uncharacterized protein. (408 aa)
OsI_06865Uncharacterized protein. (295 aa)
OsI_06407Uncharacterized protein. (849 aa)
OsI_05937Uncharacterized protein. (1290 aa)
OsI_05839Uncharacterized protein; Belongs to the DEAD box helicase family. (414 aa)
OsI_05643Uncharacterized protein. (597 aa)
OsI_04749KH_dom_type_1 domain-containing protein. (239 aa)
OsI_04736Uncharacterized protein. (197 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (104 aa)
OsI_02545Uncharacterized protein. (443 aa)
OsI_01141DUF1618 domain-containing protein. (382 aa)
OsI_01140DUF1618 domain-containing protein. (357 aa)
OsI_01139DUF1618 domain-containing protein. (373 aa)
OsI_01136DUF1618 domain-containing protein. (388 aa)
OsI_01135DUF1618 domain-containing protein. (386 aa)
HOX29Homeobox-leucine zipper protein HOX29; Probable transcription factor. (861 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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