41 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_04560	Uncharacterized protein; Belongs to the BolA/IbaG family. (94 aa)
	OsI_34355	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (153 aa)
	OsI_38124	Uncharacterized protein. (196 aa)
	OsI_38125	PsaL domain-containing protein. (208 aa)
	OsI_38129	PsaL domain-containing protein. (170 aa)
	OsI_39004	BZIP domain-containing protein. (298 aa)
	OsI_02169	Uncharacterized protein. (1199 aa)
	OsI_06379	Serine/threonine-protein phosphatase. (107 aa)
	OsI_06381	Serine/threonine-protein phosphatase. (276 aa)
	OsI_06668	BZIP domain-containing protein. (298 aa)
	OsI_09102	Uncharacterized protein. (204 aa)
	OsI_13527	Uncharacterized protein. (1156 aa)
	OsI_10712	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (143 aa)
	OsI_13741	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (145 aa)
	OsI_10169	Serine/threonine-protein phosphatase. (340 aa)
	OsI_18184	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (139 aa)
	OsI_20205	Ubiquitin-like domain-containing protein. (83 aa)
	OsI_22639	WW domain-containing protein. (824 aa)
	OsI_23998	BZIP domain-containing protein. (295 aa)
	OsI_24006	BZIP domain-containing protein. (295 aa)
	OsI_22316	Uncharacterized protein. (618 aa)
	OsI_26009	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (139 aa)
	OsI_25134	BZIP domain-containing protein. (436 aa)
	OsI_28074	TMEM189_B_dmain domain-containing protein. (288 aa)
	OsI_30482	Uncharacterized protein. (222 aa)
	OsI_30535	Uncharacterized protein. (587 aa)
	OsI_34140	Ubiquitin-like domain-containing protein. (81 aa)
	OsI_39206	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (145 aa)
	OsI_28067	Ubiquitin-like domain-containing protein. (253 aa)
	OsI_24473	HATPase_c domain-containing protein. (837 aa)
	PP2A1	Serine/threonine-protein phosphatase PP2A-1 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (306 aa)
	OsI_22103	Uncharacterized protein. (226 aa)
	OsI_18188	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (127 aa)
	OsI_14097	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (158 aa)
	OsI_14096	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (150 aa)
	PP2A2	Serine/threonine-protein phosphatase PP2A-2 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (307 aa)
	OsI_13898	BZIP domain-containing protein. (421 aa)
	OsI_08373	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (132 aa)
	PP2A3	Serine/threonine-protein phosphatase PP2A-3 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (307 aa)
	OsI_01687	Ubiquitin-like domain-containing protein. (155 aa)
	OsI_06055	BZIP domain-containing protein. (278 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_01687	OsI_02169	A2WPB5	B8A8Z0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.621
OsI_01687	OsI_06379	A2WPB5	B8AE76	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.579
OsI_01687	OsI_06381	A2WPB5	B8AE78	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.579
OsI_01687	OsI_10169	A2WPB5	B8APA0	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.579
OsI_01687	OsI_13527	A2WPB5	B8AJX0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.724
OsI_01687	OsI_22316	A2WPB5	B8B4F8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.724
OsI_01687	OsI_22639	A2WPB5	B8B0V4	Ubiquitin-like domain-containing protein.	WW domain-containing protein.	0.621
OsI_01687	OsI_28074	A2WPB5	B8BBE7	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.934
OsI_01687	OsI_30535	A2WPB5	B8BD97	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.621
OsI_01687	OsI_34140	A2WPB5	B8BHM2	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.876
OsI_01687	PP2A1	A2WPB5	A2YEB4	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase PP2A-1 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily.	0.579
OsI_01687	PP2A2	A2WPB5	A2XN40	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase PP2A-2 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily.	0.579
OsI_01687	PP2A3	A2WPB5	A2X2G3	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase PP2A-3 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily.	0.579
OsI_02169	OsI_01687	B8A8Z0	A2WPB5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.621
OsI_02169	OsI_06379	B8A8Z0	B8AE76	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.928
OsI_02169	OsI_06381	B8A8Z0	B8AE78	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.928
OsI_02169	OsI_10169	B8A8Z0	B8APA0	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.928
OsI_02169	OsI_20205	B8A8Z0	B8AYV2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.621
OsI_02169	OsI_28067	B8A8Z0	A2YRX0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.621
OsI_02169	OsI_34140	B8A8Z0	B8BHM2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.621

page 1 of 9

Server load: low (12%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About