STRINGSTRING
OsI_31617 OsI_31617 OsI_01971 OsI_01971 OsI_02447 OsI_02447 OsI_02985 OsI_02985 OsI_04340 OsI_04340 OsI_04942 OsI_04942 OsI_04943 OsI_04943 OsI_05813 OsI_05813 OsI_09788 OsI_09788 GATC GATC OsI_17093 OsI_17093 OsI_17318 OsI_17318 OsI_20760 OsI_20760 OsI_22688 OsI_22688 OsI_26576 OsI_26576 OsI_26579 OsI_26579 OsI_26580 OsI_26580 OsI_26581 OsI_26581 OsI_28020 OsI_28020 OsI_33423 OsI_33423 OsI_33842 OsI_33842 OsI_00787 OsI_00787 OsI_02204 OsI_02204 OsI_03713 OsI_03713 OsI_02895 OsI_02895 OsI_02983 OsI_02983 OsI_04485 OsI_04485 OsI_06283 OsI_06283 OsI_05816 OsI_05816 OsI_08886 OsI_08886 OsI_10577 OsI_10577 OsI_12702 OsI_12702 OsI_12927 OsI_12927 OsI_11561 OsI_11561 OsI_14623 OsI_14623 OsI_22677 OsI_22677 OsI_22031 OsI_22031 OsI_23551 OsI_23551 OsI_22364 OsI_22364 OsI_22377 OsI_22377 OsI_25696 OsI_25696 OsI_30216 OsI_30216 OsI_30360 OsI_30360 OsI_30637 OsI_30637 OsI_32188 OsI_32188 OsI_32422 OsI_32422 OsI_32774 OsI_32774 Os10g0536000 Os10g0536000 OsI_34973 OsI_34973 OsI_37352 OsI_37352 OsI_37371 OsI_37371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_31617Uncharacterized protein. (470 aa)
OsI_01971Ubiquitin-like domain-containing protein. (279 aa)
OsI_02447Uncharacterized protein. (95 aa)
OsI_02985Uncharacterized protein. (69 aa)
OsI_04340Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
OsI_04942Small ubiquitin-related modifier. (101 aa)
OsI_04943Small ubiquitin-related modifier. (100 aa)
OsI_05813DUF5311 domain-containing protein. (1388 aa)
OsI_09788UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
GATCGlutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). (153 aa)
OsI_17093UBIQUITIN_CONJUGAT_2 domain-containing protein. (160 aa)
OsI_17318Uncharacterized protein. (858 aa)
OsI_20760Uncharacterized protein. (269 aa)
OsI_22688Uncharacterized protein. (174 aa)
OsI_26576Ubiquitin-like domain-containing protein. (110 aa)
OsI_26579Ubiquitin-like domain-containing protein. (110 aa)
OsI_26580Uncharacterized protein. (327 aa)
OsI_26581Uncharacterized protein. (295 aa)
OsI_28020WD_REPEATS_REGION domain-containing protein. (342 aa)
OsI_33423Uncharacterized protein. (1272 aa)
OsI_33842Uncharacterized protein. (178 aa)
OsI_00787Nuclear pore complex protein NUP35. (327 aa)
OsI_02204Uncharacterized protein. (169 aa)
OsI_03713Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (649 aa)
OsI_02895WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (347 aa)
OsI_02983WD_REPEATS_REGION domain-containing protein. (281 aa)
OsI_04485Nsp1_C domain-containing protein. (250 aa)
OsI_06283Uncharacterized protein. (1814 aa)
OsI_05816Uncharacterized protein. (590 aa)
OsI_08886TPR_MLP1_2 domain-containing protein. (2033 aa)
OsI_10577Uncharacterized protein. (74 aa)
OsI_12702Uncharacterized protein. (353 aa)
OsI_12927RanBD1 domain-containing protein. (416 aa)
OsI_11561Nuclear pore protein. (870 aa)
OsI_14623C2H2-type domain-containing protein. (478 aa)
OsI_22677Uncharacterized protein. (1657 aa)
OsI_22031Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1088 aa)
OsI_23551Uncharacterized protein. (396 aa)
OsI_22364ULP_PROTEASE domain-containing protein. (585 aa)
OsI_22377ULP_PROTEASE domain-containing protein. (880 aa)
OsI_25696Nup54 domain-containing protein. (381 aa)
OsI_30216ULP_PROTEASE domain-containing protein. (675 aa)
OsI_30360Uncharacterized protein. (244 aa)
OsI_30637Retrotrans_gag domain-containing protein. (520 aa)
OsI_32188Uncharacterized protein. (602 aa)
OsI_32422Uncharacterized protein. (1924 aa)
OsI_32774Uncharacterized protein. (1837 aa)
Os10g0536000SUMO E2 conjugating enzyme SCE1-like protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
OsI_34973WD_REPEATS_REGION domain-containing protein. (449 aa)
OsI_37352WD_REPEATS_REGION domain-containing protein. (428 aa)
OsI_37371Uncharacterized protein. (92 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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