STRINGSTRING
OsI_18591 OsI_18591 OsI_18479 OsI_18479 OsI_18249 OsI_18249 OsI_18166 OsI_18166 OsI_16386 OsI_16386 OsI_15961 OsI_15961 OsI_15951 OsI_15951 OsI_16624 OsI_16624 OsI_10148 OsI_10148 OsI_12760 OsI_12760 OsI_12723 OsI_12723 OsI_12458 OsI_12458 OsI_11010 OsI_11010 OsI_12160 OsI_12160 OsI_07319 OsI_07319 OsI_07292 OsI_07292 OsI_07185 OsI_07185 OsI_07099 OsI_07099 OsI_09388 OsI_09388 OsI_00630 OsI_00630 OsI_00530 OsI_00530 OsI_04360 OsI_04360 OsI_04266 OsI_04266 OsI_05185 OsI_05185 OsI_05172 OsI_05172 OsI_05156 OsI_05156 OsI_04810 OsI_04810 OsI_05060 OsI_05060 OsI_38408 OsI_38408 OsI_37921 OsI_37921 OsI_37920 OsI_37920 OsI_37160 OsI_37160 OsI_36975 OsI_36975 OsI_35888 OsI_35888 OsI_33558 OsI_33558 OsI_32069 OsI_32069 OsI_31487 OsI_31487 OsI_31486 OsI_31486 OsI_30353 OsI_30353 OsI_30118 OsI_30118 OsI_29431 OsI_29431 OsI_28067 OsI_28067 OsI_27675 OsI_27675 OsI_26637 OsI_26637 OsI_25432 OsI_25432 OsI_24650 OsI_24650 OsI_24647 OsI_24647 OsI_21263 OsI_21263 OsI_20371 OsI_20371 OsI_18214 OsI_18214 OsI_18204 OsI_18204 OsI_17884 OsI_17884 OsI_17160 OsI_17160 OsI_16639 OsI_16639 OsI_14707 OsI_14707 OsI_14692 OsI_14692 OsI_14456 OsI_14456 OsI_11933 OsI_11933 OsI_11178 OsI_11178 OsI_11070 OsI_11070 OsI_10518 OsI_10518 OsI_37949 OsI_37949 OsI_38467 OsI_38467 OsI_37440 OsI_37440 OsI_36814 OsI_36814 OsI_35576 OsI_35576 OsI_00350 OsI_00350 OsI_01538 OsI_01538 OsI_01539 OsI_01539 OsI_01687 OsI_01687 OsI_02464 OsI_02464 OsI_02469 OsI_02469 OsI_02952 OsI_02952 OsI_03140 OsI_03140 OsI_03144 OsI_03144 OsI_03659 OsI_03659 OsI_03660 OsI_03660 OsI_05427 OsI_05427 OsI_05697 OsI_05697 OsI_06733 OsI_06733 OsI_07184 OsI_07184 OsI_07680 OsI_07680 OsI_09147 OsI_09147 OsI_09175 OsI_09175 OsI_09678 OsI_09678 OsI_35089 OsI_35089 OsI_34140 OsI_34140 OsI_34031 OsI_34031 OsI_32495 OsI_32495 OsI_30540 OsI_30540 OsI_28022 OsI_28022 OsI_27932 OsI_27932 OsI_27885 OsI_27885 OsI_25208 OsI_25208 OsI_24654 OsI_24654 OsI_24649 OsI_24649 OsI_24648 OsI_24648 OsI_27361 OsI_27361 OsI_23219 OsI_23219 OsI_24326 OsI_24326 OsI_22539 OsI_22539 OsI_22537 OsI_22537 OsI_20370 OsI_20370 OsI_20205 OsI_20205
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_18591LOB domain-containing protein. (208 aa)
OsI_18479Uncharacterized protein. (826 aa)
OsI_18249RECA_2 domain-containing protein. (363 aa)
OsI_18166Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (988 aa)
OsI_16386Uncharacterized protein. (926 aa)
OsI_15961Uncharacterized protein. (2505 aa)
OsI_15951HRDC domain-containing protein. (346 aa)
OsI_16624Pectinesterase domain-containing protein. (191 aa)
OsI_10148DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (981 aa)
OsI_12760Uncharacterized protein; Belongs to the RecA family. (436 aa)
OsI_12723DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. (339 aa)
OsI_12458UvrD_C_2 domain-containing protein. (565 aa)
OsI_11010BHLH domain-containing protein. (597 aa)
OsI_12160Uncharacterized protein. (677 aa)
OsI_07319Rep_fac-A_C domain-containing protein. (431 aa)
OsI_07292Uncharacterized protein. (178 aa)
OsI_07185Toprim domain-containing protein. (968 aa)
OsI_07099Uncharacterized protein. (413 aa)
OsI_09388NAC domain-containing protein. (331 aa)
OsI_00630DUF1767 domain-containing protein. (420 aa)
OsI_00530Tower domain-containing protein. (1484 aa)
OsI_04360Uncharacterized protein. (397 aa)
OsI_04266LOB domain-containing protein. (251 aa)
OsI_05185ERCC4 domain-containing protein. (507 aa)
OsI_05172Uncharacterized protein. (198 aa)
OsI_05156Uncharacterized protein; Belongs to the RecA family. (410 aa)
OsI_04810Uncharacterized protein; Belongs to the RecA family. (339 aa)
OsI_05060Uncharacterized protein. (157 aa)
OsI_38408Uncharacterized protein; Belongs to the RecA family. (294 aa)
OsI_37921Uncharacterized protein. (1040 aa)
OsI_37920Uncharacterized protein. (1121 aa)
OsI_37160Uncharacterized protein. (567 aa)
OsI_36975ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (588 aa)
OsI_35888Uncharacterized protein; Belongs to the RecA family. (430 aa)
OsI_33558NAC domain-containing protein. (543 aa)
OsI_32069Uncharacterized protein. (131 aa)
OsI_31487Uncharacterized protein. (137 aa)
OsI_31486Pectinesterase. (413 aa)
OsI_30353RECA_2 domain-containing protein. (280 aa)
OsI_30118Uncharacterized protein. (138 aa)
OsI_29431Pectinesterase. (663 aa)
OsI_28067Ubiquitin-like domain-containing protein. (253 aa)
OsI_27675Uncharacterized protein. (527 aa)
OsI_26637zf-GRF domain-containing protein. (149 aa)
OsI_25432Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (444 aa)
OsI_246503'-5' exonuclease domain-containing protein. (496 aa)
OsI_246473'-5' exonuclease domain-containing protein. (159 aa)
OsI_21263NAC domain-containing protein. (683 aa)
OsI_20371Uncharacterized protein. (261 aa)
OsI_18214Uncharacterized protein. (468 aa)
OsI_18204Uncharacterized protein. (359 aa)
OsI_17884Uncharacterized protein. (163 aa)
OsI_17160Uncharacterized protein. (1269 aa)
OsI_16639NAC domain-containing protein. (278 aa)
OsI_14707Uncharacterized protein. (455 aa)
OsI_146923'-5' exonuclease domain-containing protein. (256 aa)
OsI_144563'-5' exonuclease domain-containing protein. (231 aa)
OsI_11933Pectinesterase. (603 aa)
OsI_11178Uncharacterized protein. (116 aa)
OsI_11070Uncharacterized protein. (135 aa)
OsI_10518Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
OsI_37949Uncharacterized protein. (306 aa)
OsI_38467Uncharacterized protein. (202 aa)
OsI_37440GIY-YIG domain-containing protein. (164 aa)
OsI_36814DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. (339 aa)
OsI_355763'-5' exonuclease domain-containing protein. (186 aa)
OsI_00350Uncharacterized protein. (223 aa)
OsI_01538Uncharacterized protein. (288 aa)
OsI_015393'-5' exonuclease domain-containing protein. (201 aa)
OsI_01687Ubiquitin-like domain-containing protein. (155 aa)
OsI_02464Uncharacterized protein. (321 aa)
OsI_02469Uncharacterized protein. (156 aa)
OsI_02952Uncharacterized protein. (410 aa)
OsI_031403'-5' exonuclease domain-containing protein. (357 aa)
OsI_031443'-5' exonuclease domain-containing protein. (199 aa)
OsI_036593'-5' exonuclease domain-containing protein. (208 aa)
OsI_036603'-5' exonuclease domain-containing protein. (208 aa)
OsI_05427Uncharacterized protein. (377 aa)
OsI_05697NAC domain-containing protein. (301 aa)
OsI_06733Uncharacterized protein. (153 aa)
OsI_07184zf-GRF domain-containing protein. (103 aa)
OsI_07680RECA_2 domain-containing protein. (290 aa)
OsI_09147Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (658 aa)
OsI_09175ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (692 aa)
OsI_09678NAC domain-containing protein. (295 aa)
OsI_35089GIY-YIG domain-containing protein. (204 aa)
OsI_34140Ubiquitin-like domain-containing protein. (81 aa)
OsI_34031NAC domain-containing protein. (271 aa)
OsI_32495Uncharacterized protein. (787 aa)
OsI_30540DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (897 aa)
OsI_28022Uncharacterized protein. (705 aa)
OsI_27932Uncharacterized protein. (122 aa)
OsI_27885NAC domain-containing protein. (738 aa)
OsI_25208DUF223 domain-containing protein. (376 aa)
OsI_24654Rep_fac-A_C domain-containing protein. (298 aa)
OsI_246493'-5' exonuclease domain-containing protein. (159 aa)
OsI_246483'-5' exonuclease domain-containing protein. (140 aa)
OsI_27361ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (905 aa)
OsI_23219Rep_fac-A_C domain-containing protein. (667 aa)
OsI_24326Uncharacterized protein. (162 aa)
OsI_22539Toprim domain-containing protein. (888 aa)
OsI_22537zf-C4_Topoisom domain-containing protein. (301 aa)
OsI_20370Uncharacterized protein. (210 aa)
OsI_20205Ubiquitin-like domain-containing protein. (83 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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