STRINGSTRING
OsI_14059 OsI_14059 rpoC2 rpoC2 rpoC1 rpoC1 rpoB rpoB OsI_37686 OsI_37686 OsI_37684 OsI_37684 OsI_39172 OsI_39172 OsI_36068 OsI_36068 OsI_35248 OsI_35248 OsI_37007 OsI_37007 OsI_34688 OsI_34688 OsI_34611 OsI_34611 OsI_34140 OsI_34140 OsI_33953 OsI_33953 OsI_33947 OsI_33947 OsI_33194 OsI_33194 OsI_30378 OsI_30378 OsI_29763 OsI_29763 OsI_27624 OsI_27624 OsI_28861 OsI_28861 OsI_30241 OsI_30241 OsI_26568 OsI_26568 OsI_24588 OsI_24588 OsI_26051 OsI_26051 OsI_25903 OsI_25903 OsI_27077 OsI_27077 OsI_21849 OsI_21849 OsI_18944 OsI_18944 OsI_18797 OsI_18797 OsI_20205 OsI_20205 OsI_20069 OsI_20069 OsI_18488 OsI_18488 OsI_21216 OsI_21216 OsI_19316 OsI_19316 OsI_17724 OsI_17724 OsI_17620 OsI_17620 OsI_15914 OsI_15914 OsI_15438 OsI_15438 OsI_15437 OsI_15437 OsI_18057 OsI_18057 OsI_18056 OsI_18056 OsI_16588 OsI_16588 OsI_17944 OsI_17944 OsI_17910 OsI_17910 OsI_17876 OsI_17876 OsI_16506 OsI_16506 OsI_13435 OsI_13435 OsI_11850 OsI_11850 OsI_10387 OsI_10387 OsI_14470 OsI_14470 OsI_14317 OsI_14317 OsI_14316 OsI_14316 OsI_14307 OsI_14307 OsI_11126 OsI_11126 OsI_09622 OsI_09622 OsI_13805 OsI_13805 OsI_13541 OsI_13541 OsI_10624 OsI_10624 OsI_09115 OsI_09115 OsI_05675 OsI_05675 OsI_06897 OsI_06897 OsI_00025 OsI_00025 OsI_01398 OsI_01398 OsI_04499 OsI_04499 OsI_02992 OsI_02992 OsI_04128 OsI_04128 OsI_02599 OsI_02599 OsI_02570 OsI_02570 OsI_02266 OsI_02266 OsI_02267 OsI_02267 OsI_03346 OsI_03346 OsI_03312 OsI_03312 OsI_39167 OsI_39167 OsI_38722 OsI_38722 OsI_37597 OsI_37597 OsI_37416 OsI_37416 OsI_35073 OsI_35073 OsI_34879 OsI_34879 OsI_31230 OsI_31230 OsI_28067 OsI_28067 OsI_27986 OsI_27986 OsI_27164 OsI_27164 OsI_26835 OsI_26835 OsI_26830 OsI_26830 OsI_25904 OsI_25904 OsI_25427 OsI_25427 OsI_25066 OsI_25066 OsI_24321 OsI_24321 OsI_24269 OsI_24269 OsI_22303 OsI_22303 OsI_20458 OsI_20458 OsI_19893 OsI_19893 OsI_19162 OsI_19162 OsI_18537 OsI_18537 OsI_18432 OsI_18432 OsI_16393 OsI_16393 OsI_13587 OsI_13587 OsI_13542 OsI_13542 OsI_12811 OsI_12811 OsI_12520 OsI_12520 OsI_12404 OsI_12404 OsI_09737 OsI_09737 OsI_07964 OsI_07964 OsI_06826 OsI_06826 OsI_05586 OsI_05586 OsI_03313 OsI_03313 OsI_02601 OsI_02601 OsI_01687 OsI_01687
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_14059Uncharacterized protein. (367 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1513 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (682 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1075 aa)
OsI_37686Uncharacterized protein. (223 aa)
OsI_37684Uncharacterized protein. (114 aa)
OsI_39172JAB_MPN domain-containing protein. (499 aa)
OsI_36068MAT1 domain-containing protein. (195 aa)
OsI_35248TFIIS N-terminal domain-containing protein. (338 aa)
OsI_37007Uncharacterized protein. (128 aa)
OsI_34688Uncharacterized protein. (690 aa)
OsI_34611Uncharacterized protein. (199 aa)
OsI_34140Ubiquitin-like domain-containing protein. (81 aa)
OsI_33953Uncharacterized protein. (502 aa)
OsI_33947WD_REPEATS_REGION domain-containing protein. (353 aa)
OsI_33194RNA_pol_Rpb1_5 domain-containing protein. (344 aa)
OsI_30378RPOLD domain-containing protein. (330 aa)
OsI_29763MPN domain-containing protein. (329 aa)
OsI_27624PCI domain-containing protein. (426 aa)
OsI_28861Uncharacterized protein. (625 aa)
OsI_30241Uncharacterized protein. (184 aa)
OsI_26568Uncharacterized protein. (131 aa)
OsI_24588Uncharacterized protein. (85 aa)
OsI_26051PCI domain-containing protein. (256 aa)
OsI_25903Uncharacterized protein. (147 aa)
OsI_27077Uncharacterized protein. (1091 aa)
OsI_21849MAT1 domain-containing protein. (195 aa)
OsI_18944SHS2_Rpb7-N domain-containing protein. (175 aa)
OsI_18797Uncharacterized protein. (81 aa)
OsI_20205Ubiquitin-like domain-containing protein. (83 aa)
OsI_20069Uncharacterized protein. (132 aa)
OsI_18488Uncharacterized protein. (87 aa)
OsI_21216CPSF_A domain-containing protein. (1089 aa)
OsI_19316Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (267 aa)
OsI_17724MPN domain-containing protein. (385 aa)
OsI_17620DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1177 aa)
OsI_15914PCI domain-containing protein. (196 aa)
OsI_15438Uncharacterized protein. (365 aa)
OsI_15437SANTA domain-containing protein. (633 aa)
OsI_18057Uncharacterized protein. (987 aa)
OsI_18056Helicase C-terminal domain-containing protein. (332 aa)
OsI_16588VWFA domain-containing protein. (509 aa)
OsI_17944RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (459 aa)
OsI_17910Uncharacterized protein. (1162 aa)
OsI_17876Poly [ADP-ribose] polymerase. (1012 aa)
OsI_16506Uncharacterized protein. (120 aa)
OsI_13435CYCLIN domain-containing protein; Belongs to the cyclin family. (330 aa)
OsI_11850Uncharacterized protein. (1572 aa)
OsI_10387PCI domain-containing protein. (399 aa)
OsI_14470RNA_pol_Rpb1_5 domain-containing protein. (976 aa)
OsI_14317Uncharacterized protein. (351 aa)
OsI_14316Uncharacterized protein. (232 aa)
OsI_14307Uncharacterized protein. (215 aa)
OsI_11126DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (870 aa)
OsI_09622DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
OsI_13805CULLIN_2 domain-containing protein; Belongs to the cullin family. (744 aa)
OsI_13541DUF1618 domain-containing protein. (511 aa)
OsI_10624PARP catalytic domain-containing protein. (463 aa)
OsI_09115Uncharacterized protein. (1127 aa)
OsI_05675Uncharacterized protein. (261 aa)
OsI_06897Uncharacterized protein. (375 aa)
OsI_00025Uncharacterized protein. (1355 aa)
OsI_01398PCI domain-containing protein. (439 aa)
OsI_04499Uncharacterized protein. (377 aa)
OsI_02992Uncharacterized protein. (997 aa)
OsI_04128Uncharacterized protein. (210 aa)
OsI_02599Uncharacterized protein. (274 aa)
OsI_02570Uncharacterized protein. (102 aa)
OsI_02266SANTA domain-containing protein. (426 aa)
OsI_02267Uncharacterized protein. (52 aa)
OsI_03346Uncharacterized protein. (766 aa)
OsI_03312DUF1618 domain-containing protein. (448 aa)
OsI_39167JAB_MPN domain-containing protein. (566 aa)
OsI_38722DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
OsI_37597TFIIS N-terminal domain-containing protein. (340 aa)
OsI_37416Uncharacterized protein. (227 aa)
OsI_35073Uncharacterized protein. (227 aa)
OsI_34879Uncharacterized protein. (139 aa)
OsI_31230Uncharacterized protein. (124 aa)
OsI_28067Ubiquitin-like domain-containing protein. (253 aa)
OsI_27986DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1347 aa)
OsI_27164Uncharacterized protein. (229 aa)
OsI_26835Phorbol-ester/DAG-type domain-containing protein. (259 aa)
OsI_26830Phorbol-ester/DAG-type domain-containing protein. (107 aa)
OsI_25904Uncharacterized protein. (142 aa)
OsI_25427Uncharacterized protein. (373 aa)
OsI_25066RNA_pol_L_2 domain-containing protein. (135 aa)
OsI_24321Uncharacterized protein. (191 aa)
OsI_24269TFIIS N-terminal domain-containing protein. (274 aa)
OsI_22303Suf domain-containing protein. (801 aa)
OsI_20458Uncharacterized protein. (368 aa)
OsI_19893Uncharacterized protein. (177 aa)
OsI_19162Uncharacterized protein. (856 aa)
OsI_18537SHS2_Rpb7-N domain-containing protein. (175 aa)
OsI_18432Helicase ATP-binding domain-containing protein. (734 aa)
OsI_16393Uncharacterized protein. (217 aa)
OsI_13587DUF1618 domain-containing protein. (261 aa)
OsI_13542Uncharacterized protein. (740 aa)
OsI_12811DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1222 aa)
OsI_12520RRM domain-containing protein. (171 aa)
OsI_12404Uncharacterized protein. (143 aa)
OsI_09737PCI domain-containing protein. (441 aa)
OsI_07964Uncharacterized protein. (311 aa)
OsI_06826Uncharacterized protein. (722 aa)
OsI_05586RPOL4c domain-containing protein. (142 aa)
OsI_03313Uncharacterized protein. (736 aa)
OsI_02601Uncharacterized protein. (314 aa)
OsI_01687Ubiquitin-like domain-containing protein. (155 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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