STRINGSTRING
OsI_11126 OsI_11126 OsI_29518 OsI_29518 OsI_28022 OsI_28022 OsI_27932 OsI_27932 OsI_27885 OsI_27885 OsI_27632 OsI_27632 OsI_27624 OsI_27624 OsI_28861 OsI_28861 OsI_30241 OsI_30241 OsI_25208 OsI_25208 OsI_26568 OsI_26568 OsI_29519 OsI_29519 OsI_29763 OsI_29763 OsI_30378 OsI_30378 OsI_33194 OsI_33194 OsI_33947 OsI_33947 OsI_33953 OsI_33953 OsI_34031 OsI_34031 OsI_34140 OsI_34140 OsI_34611 OsI_34611 OsI_34688 OsI_34688 OsI_34758 OsI_34758 OsI_37007 OsI_37007 OsI_35248 OsI_35248 OsI_35669 OsI_35669 OsI_36068 OsI_36068 OsI_36544 OsI_36544 OsI_38467 OsI_38467 OsI_39172 OsI_39172 OsI_37684 OsI_37684 OsI_37686 OsI_37686 OsI_37949 OsI_37949 rpoB rpoB rpoC1 rpoC1 rpoC2 rpoC2 OsI_11178 OsI_11178 OsI_12404 OsI_12404 OsI_12520 OsI_12520 OsI_12811 OsI_12811 OsI_13542 OsI_13542 OsI_13587 OsI_13587 OsI_13856 OsI_13856 OsI_14059 OsI_14059 OsI_14707 OsI_14707 OsI_16393 OsI_16393 OsI_16639 OsI_16639 OsI_18432 OsI_18432 OsI_18537 OsI_18537 OsI_19162 OsI_19162 OsI_19893 OsI_19893 OsI_20371 OsI_20371 OsI_20458 OsI_20458 OsI_21263 OsI_21263 OsI_22303 OsI_22303 OsI_24269 OsI_24269 OsI_24321 OsI_24321 OsI_25066 OsI_25066 OsI_25427 OsI_25427 OsI_25904 OsI_25904 OsI_26830 OsI_26830 OsI_26835 OsI_26835 OsI_27164 OsI_27164 OsI_27986 OsI_27986 OsI_28067 OsI_28067 OsI_30118 OsI_30118 OsI_31230 OsI_31230 OsI_32069 OsI_32069 OsI_32447 OsI_32447 OsI_33558 OsI_33558 OsI_34879 OsI_34879 OsI_35073 OsI_35073 OsI_37160 OsI_37160 OsI_37416 OsI_37416 OsI_37597 OsI_37597 OsI_37665 OsI_37665 OsI_37801 OsI_37801 OsI_38032 OsI_38032 OsI_38033 OsI_38033 OsI_38722 OsI_38722 OsI_39167 OsI_39167 OsI_11070 OsI_11070 OsI_10518 OsI_10518 OsI_09737 OsI_09737 OsI_24654 OsI_24654 OsI_24588 OsI_24588 OsI_26051 OsI_26051 OsI_25903 OsI_25903 OsI_27077 OsI_27077 OsI_23577 OsI_23577 OsI_23576 OsI_23576 OsI_23578 OsI_23578 OsI_21849 OsI_21849 OsI_23219 OsI_23219 OsI_21603 OsI_21603 OsI_20723 OsI_20723 OsI_18944 OsI_18944 OsI_20370 OsI_20370 OsI_18797 OsI_18797 OsI_20205 OsI_20205 OsI_20069 OsI_20069 OsI_18564 OsI_18564 OsI_18488 OsI_18488 OsI_21216 OsI_21216 OsI_18166 OsI_18166 OsI_19316 OsI_19316 OsI_17724 OsI_17724 OsI_17657 OsI_17657 OsI_17620 OsI_17620 OsI_15914 OsI_15914 OsI_17026 OsI_17026 OsI_15438 OsI_15438 OsI_15437 OsI_15437 OsI_18057 OsI_18057 OsI_18056 OsI_18056 OsI_16588 OsI_16588 OsI_17944 OsI_17944 OsI_17910 OsI_17910 OsI_17876 OsI_17876 OsI_16506 OsI_16506 OsI_13435 OsI_13435 OsI_11850 OsI_11850 OsI_10446 OsI_10446 OsI_10387 OsI_10387 OsI_14470 OsI_14470 OsI_14317 OsI_14317 OsI_14316 OsI_14316 OsI_14307 OsI_14307 OsI_09828 OsI_09828 OsI_09678 OsI_09678 OsI_09344 OsI_09344 OsI_09147 OsI_09147 OsI_07964 OsI_07964 OsI_07371 OsI_07371 OsI_06826 OsI_06826 OsI_05697 OsI_05697 OsI_05586 OsI_05586 OsI_03313 OsI_03313 OsI_02952 OsI_02952 OsI_02601 OsI_02601 OsI_01687 OsI_01687 OsI_00350 OsI_00350 OsI_03312 OsI_03312 OsI_03346 OsI_03346 OsI_05060 OsI_05060 OsI_03625 OsI_03625 OsI_02267 OsI_02267 OsI_02266 OsI_02266 OsI_02570 OsI_02570 OsI_02599 OsI_02599 OsI_04128 OsI_04128 OsI_04360 OsI_04360 OsI_02992 OsI_02992 OsI_04499 OsI_04499 OsI_01398 OsI_01398 OsI_00025 OsI_00025 OsI_06323 OsI_06323 OsI_09388 OsI_09388 OsI_06897 OsI_06897 OsI_05675 OsI_05675 OsI_08618 OsI_08618 OsI_07319 OsI_07319 OsI_07377 OsI_07377 OsI_09115 OsI_09115 OsI_09136 OsI_09136 OsI_10624 OsI_10624 OsI_13541 OsI_13541 OsI_10837 OsI_10837 OsI_12160 OsI_12160 OsI_13805 OsI_13805 OsI_09622 OsI_09622
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_11126DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (870 aa)
OsI_29518Uncharacterized protein. (131 aa)
OsI_28022Uncharacterized protein. (705 aa)
OsI_27932Uncharacterized protein. (122 aa)
OsI_27885NAC domain-containing protein. (738 aa)
OsI_27632AAA domain-containing protein. (811 aa)
OsI_27624PCI domain-containing protein. (426 aa)
OsI_28861Uncharacterized protein. (625 aa)
OsI_30241Uncharacterized protein. (184 aa)
OsI_25208DUF223 domain-containing protein. (376 aa)
OsI_26568Uncharacterized protein. (131 aa)
OsI_29519DNA_pol_E_B domain-containing protein. (293 aa)
OsI_29763MPN domain-containing protein. (329 aa)
OsI_30378RPOLD domain-containing protein. (330 aa)
OsI_33194RNA_pol_Rpb1_5 domain-containing protein. (344 aa)
OsI_33947WD_REPEATS_REGION domain-containing protein. (353 aa)
OsI_33953Uncharacterized protein. (502 aa)
OsI_34031NAC domain-containing protein. (271 aa)
OsI_34140Ubiquitin-like domain-containing protein. (81 aa)
OsI_34611Uncharacterized protein. (199 aa)
OsI_34688Uncharacterized protein. (690 aa)
OsI_34758Uncharacterized protein. (648 aa)
OsI_37007Uncharacterized protein. (128 aa)
OsI_35248TFIIS N-terminal domain-containing protein. (338 aa)
OsI_35669DNA_pol3_gamma3 domain-containing protein. (860 aa)
OsI_36068MAT1 domain-containing protein. (195 aa)
OsI_36544Replication factor C subunit 1. (1014 aa)
OsI_38467Uncharacterized protein. (202 aa)
OsI_39172JAB_MPN domain-containing protein. (499 aa)
OsI_37684Uncharacterized protein. (114 aa)
OsI_37686Uncharacterized protein. (223 aa)
OsI_37949Uncharacterized protein. (306 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1075 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (682 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1513 aa)
OsI_11178Uncharacterized protein. (116 aa)
OsI_12404Uncharacterized protein. (143 aa)
OsI_12520RRM domain-containing protein. (171 aa)
OsI_12811DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1222 aa)
OsI_13542Uncharacterized protein. (740 aa)
OsI_13587DUF1618 domain-containing protein. (261 aa)
OsI_13856AAA domain-containing protein. (354 aa)
OsI_14059Uncharacterized protein. (367 aa)
OsI_14707Uncharacterized protein. (455 aa)
OsI_16393Uncharacterized protein. (217 aa)
OsI_16639NAC domain-containing protein. (278 aa)
OsI_18432Helicase ATP-binding domain-containing protein. (734 aa)
OsI_18537SHS2_Rpb7-N domain-containing protein. (175 aa)
OsI_19162Uncharacterized protein. (856 aa)
OsI_19893Uncharacterized protein. (177 aa)
OsI_20371Uncharacterized protein. (261 aa)
OsI_20458Uncharacterized protein. (368 aa)
OsI_21263NAC domain-containing protein. (683 aa)
OsI_22303Suf domain-containing protein. (801 aa)
OsI_24269TFIIS N-terminal domain-containing protein. (274 aa)
OsI_24321Uncharacterized protein. (191 aa)
OsI_25066RNA_pol_L_2 domain-containing protein. (135 aa)
OsI_25427Uncharacterized protein. (373 aa)
OsI_25904Uncharacterized protein. (142 aa)
OsI_26830Phorbol-ester/DAG-type domain-containing protein. (107 aa)
OsI_26835Phorbol-ester/DAG-type domain-containing protein. (259 aa)
OsI_27164Uncharacterized protein. (229 aa)
OsI_27986DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1347 aa)
OsI_28067Ubiquitin-like domain-containing protein. (253 aa)
OsI_30118Uncharacterized protein. (138 aa)
OsI_31230Uncharacterized protein. (124 aa)
OsI_32069Uncharacterized protein. (131 aa)
OsI_32447CBFD_NFYB_HMF domain-containing protein. (167 aa)
OsI_33558NAC domain-containing protein. (543 aa)
OsI_34879Uncharacterized protein. (139 aa)
OsI_35073Uncharacterized protein. (227 aa)
OsI_37160Uncharacterized protein. (567 aa)
OsI_37416Uncharacterized protein. (227 aa)
OsI_37597TFIIS N-terminal domain-containing protein. (340 aa)
OsI_37665AAA domain-containing protein. (339 aa)
OsI_37801DNA_pol3_gamma3 domain-containing protein. (1174 aa)
OsI_38032AAA domain-containing protein. (950 aa)
OsI_38033Uncharacterized protein. (195 aa)
OsI_38722DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
OsI_39167JAB_MPN domain-containing protein. (566 aa)
OsI_11070Uncharacterized protein. (135 aa)
OsI_10518Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
OsI_09737PCI domain-containing protein. (441 aa)
OsI_24654Rep_fac-A_C domain-containing protein. (298 aa)
OsI_24588Uncharacterized protein. (85 aa)
OsI_26051PCI domain-containing protein. (256 aa)
OsI_25903Uncharacterized protein. (147 aa)
OsI_27077Uncharacterized protein. (1091 aa)
OsI_23577TFIIS central domain-containing protein. (699 aa)
OsI_23576Uncharacterized protein. (371 aa)
OsI_23578Uncharacterized protein. (268 aa)
OsI_21849MAT1 domain-containing protein. (195 aa)
OsI_23219Rep_fac-A_C domain-containing protein. (667 aa)
OsI_21603BRCT domain-containing protein. (367 aa)
OsI_20723DNA_pol3_gamma3 domain-containing protein. (1079 aa)
OsI_18944SHS2_Rpb7-N domain-containing protein. (175 aa)
OsI_20370Uncharacterized protein. (210 aa)
OsI_18797Uncharacterized protein. (81 aa)
OsI_20205Ubiquitin-like domain-containing protein. (83 aa)
OsI_20069Uncharacterized protein. (132 aa)
OsI_18564DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (533 aa)
OsI_18488Uncharacterized protein. (87 aa)
OsI_21216CPSF_A domain-containing protein. (1089 aa)
OsI_18166Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (988 aa)
OsI_19316Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (267 aa)
OsI_17724MPN domain-containing protein. (385 aa)
OsI_17657SPOC domain-containing protein. (784 aa)
OsI_17620DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1177 aa)
OsI_15914PCI domain-containing protein. (196 aa)
OsI_17026AAA domain-containing protein. (335 aa)
OsI_15438Uncharacterized protein. (365 aa)
OsI_15437SANTA domain-containing protein. (633 aa)
OsI_18057Uncharacterized protein. (987 aa)
OsI_18056Helicase C-terminal domain-containing protein. (332 aa)
OsI_16588VWFA domain-containing protein. (509 aa)
OsI_17944RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (459 aa)
OsI_17910Uncharacterized protein. (1162 aa)
OsI_17876Poly [ADP-ribose] polymerase. (1012 aa)
OsI_16506Uncharacterized protein. (120 aa)
OsI_13435CYCLIN domain-containing protein; Belongs to the cyclin family. (330 aa)
OsI_11850Uncharacterized protein. (1572 aa)
OsI_10446Uncharacterized protein. (1487 aa)
OsI_10387PCI domain-containing protein. (399 aa)
OsI_14470RNA_pol_Rpb1_5 domain-containing protein. (976 aa)
OsI_14317Uncharacterized protein. (351 aa)
OsI_14316Uncharacterized protein. (232 aa)
OsI_14307Uncharacterized protein. (215 aa)
OsI_09828Uncharacterized protein. (429 aa)
OsI_09678NAC domain-containing protein. (295 aa)
OsI_09344Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
OsI_09147Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (658 aa)
OsI_07964Uncharacterized protein. (311 aa)
OsI_07371DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (152 aa)
OsI_06826Uncharacterized protein. (722 aa)
OsI_05697NAC domain-containing protein. (301 aa)
OsI_05586RPOL4c domain-containing protein. (142 aa)
OsI_03313Uncharacterized protein. (736 aa)
OsI_02952Uncharacterized protein. (410 aa)
OsI_02601Uncharacterized protein. (314 aa)
OsI_01687Ubiquitin-like domain-containing protein. (155 aa)
OsI_00350Uncharacterized protein. (223 aa)
OsI_03312DUF1618 domain-containing protein. (448 aa)
OsI_03346Uncharacterized protein. (766 aa)
OsI_05060Uncharacterized protein. (157 aa)
OsI_03625DNA_pol3_gamma3 domain-containing protein. (815 aa)
OsI_02267Uncharacterized protein. (52 aa)
OsI_02266SANTA domain-containing protein. (426 aa)
OsI_02570Uncharacterized protein. (102 aa)
OsI_02599Uncharacterized protein. (274 aa)
OsI_04128Uncharacterized protein. (210 aa)
OsI_04360Uncharacterized protein. (397 aa)
OsI_02992Uncharacterized protein. (997 aa)
OsI_04499Uncharacterized protein. (377 aa)
OsI_01398PCI domain-containing protein. (439 aa)
OsI_00025Uncharacterized protein. (1355 aa)
OsI_06323TFIIS central domain-containing protein. (907 aa)
OsI_09388NAC domain-containing protein. (331 aa)
OsI_06897Uncharacterized protein. (375 aa)
OsI_05675Uncharacterized protein. (261 aa)
OsI_08618Uncharacterized protein. (729 aa)
OsI_07319Rep_fac-A_C domain-containing protein. (431 aa)
OsI_07377DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2081 aa)
OsI_09115Uncharacterized protein. (1127 aa)
OsI_09136AAA domain-containing protein. (361 aa)
OsI_10624PARP catalytic domain-containing protein. (463 aa)
OsI_13541DUF1618 domain-containing protein. (511 aa)
OsI_10837AAA domain-containing protein. (1250 aa)
OsI_12160Uncharacterized protein. (677 aa)
OsI_13805CULLIN_2 domain-containing protein; Belongs to the cullin family. (744 aa)
OsI_09622DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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