81 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_26932	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (277 aa)
	OsI_01687	Ubiquitin-like domain-containing protein. (155 aa)
	OsI_03264	Uncharacterized protein; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (316 aa)
	OsI_05456	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (101 aa)
	PP2A3	Serine/threonine-protein phosphatase PP2A-3 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (307 aa)
	OsI_06426	Skp1 domain-containing protein. (201 aa)
	OsI_09656	Skp1 domain-containing protein; Belongs to the SKP1 family. (522 aa)
	OsI_12620	Cyclin N-terminal domain-containing protein. (274 aa)
	PP2A2	Serine/threonine-protein phosphatase PP2A-2 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (307 aa)
	OsI_21341	Uncharacterized protein. (403 aa)
	OsI_21358	Uncharacterized protein. (145 aa)
	OsI_21366	Uncharacterized protein; Belongs to the SKP1 family. (166 aa)
	OsI_22308	Uncharacterized protein; Belongs to the cyclin family. (363 aa)
	PP2A1	Serine/threonine-protein phosphatase PP2A-1 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (306 aa)
	OsI_24878	Uncharacterized protein; Belongs to the SKP1 family. (157 aa)
	OsI_24879	Uncharacterized protein; Belongs to the SKP1 family. (172 aa)
	OsI_24880	Uncharacterized protein; Belongs to the SKP1 family. (164 aa)
	OsI_25723	Skp1 domain-containing protein; Belongs to the SKP1 family. (162 aa)
	OsI_25724	Skp1 domain-containing protein; Belongs to the SKP1 family. (192 aa)
	OsI_26903	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (356 aa)
	OsI_26927	Uncharacterized protein; Belongs to the SKP1 family. (197 aa)
	OsI_26931	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (225 aa)
	OsI_26933	Uncharacterized protein; Belongs to the SKP1 family. (174 aa)
	OsI_26934	Uncharacterized protein; Belongs to the SKP1 family. (207 aa)
	OsI_28067	Ubiquitin-like domain-containing protein. (253 aa)
	OsI_29042	Uncharacterized protein; Belongs to the SKP1 family. (169 aa)
	OsI_29044	Uncharacterized protein; Belongs to the SKP1 family. (169 aa)
	RBR1	Retinoblastoma-related protein 1; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. (1010 aa)
	OsI_30380	CYCLIN domain-containing protein; Belongs to the cyclin family. (364 aa)
	OsI_30647	Uncharacterized protein; Belongs to the SKP1 family. (177 aa)
	OsI_30650	Uncharacterized protein; Belongs to the SKP1 family. (168 aa)
	OsI_30651	Uncharacterized protein; Belongs to the SKP1 family. (167 aa)
	OsI_30653	Uncharacterized protein; Belongs to the SKP1 family. (165 aa)
	OsI_30654	Uncharacterized protein; Belongs to the SKP1 family. (172 aa)
	OsI_31200	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (282 aa)
	OsI_31202	Uncharacterized protein. (100 aa)
	OsI_31691	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (356 aa)
	OsI_32209	Uncharacterized protein. (165 aa)
	OsI_32780	Uncharacterized protein. (117 aa)
	OsI_33751	Uncharacterized protein; Belongs to the SKP1 family. (220 aa)
	OsI_36002	Uncharacterized protein. (190 aa)
	OsI_36003	Uncharacterized protein. (190 aa)
	OsI_36004	Uncharacterized protein; Belongs to the SKP1 family. (173 aa)
	OsI_37545	E2F_TDP domain-containing protein. (446 aa)
	OsI_38928	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (364 aa)
	OsI_38959	Skp1 domain-containing protein. (157 aa)
	OsI_02169	Uncharacterized protein. (1199 aa)
	OsI_06379	Serine/threonine-protein phosphatase. (107 aa)
	OsI_06381	Serine/threonine-protein phosphatase. (276 aa)
	OsI_07553	E2F_TDP domain-containing protein. (490 aa)
	OsI_06192	Uncharacterized protein. (548 aa)
	OsI_12618	Cyclin_C domain-containing protein. (129 aa)
	OsI_10052	Uncharacterized protein; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (379 aa)
	OsI_10169	Serine/threonine-protein phosphatase. (340 aa)
	OsI_10433	CYCLIN domain-containing protein; Belongs to the cyclin family. (345 aa)
	OsI_11885	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (473 aa)
	OsI_13435	CYCLIN domain-containing protein; Belongs to the cyclin family. (330 aa)
	OsI_15841	E2F_TDP domain-containing protein. (362 aa)
	OsI_14607	E2F_TDP domain-containing protein. (351 aa)
	OsI_18470	Uncharacterized protein. (488 aa)
	OsI_20205	Ubiquitin-like domain-containing protein. (83 aa)
	OsI_22639	WW domain-containing protein. (824 aa)
	OsI_21357	Uncharacterized protein. (137 aa)
	OsI_21360	Uncharacterized protein. (271 aa)
	OsI_21362	Uncharacterized protein. (170 aa)
	OsI_21849	MAT1 domain-containing protein. (195 aa)
	OsI_22173	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (342 aa)
	OsI_26929	Uncharacterized protein; Belongs to the SKP1 family. (538 aa)
	OsI_26936	Uncharacterized protein; Belongs to the SKP1 family. (177 aa)
	OsI_26449	CYCLIN domain-containing protein; Belongs to the cyclin family. (266 aa)
	OsI_29275	Cyclin N-terminal domain-containing protein. (153 aa)
	OsI_29617	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (318 aa)
	OsI_30535	Uncharacterized protein. (587 aa)
	OsI_30646	Skp1 domain-containing protein. (118 aa)
	OsI_30656	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	OsI_32208	Uncharacterized protein; Belongs to the SKP1 family. (175 aa)
	OsI_34023	Uncharacterized protein. (461 aa)
	OsI_34140	Ubiquitin-like domain-containing protein. (81 aa)
	OsI_36068	MAT1 domain-containing protein. (195 aa)
	OsI_36358	Uncharacterized protein. (978 aa)
	OsI_38968	Skp1 domain-containing protein. (175 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_01687	OsI_02169	A2WPB5	B8A8Z0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.621
OsI_01687	OsI_05456	A2WPB5	A2WZR5	Ubiquitin-like domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.633
OsI_01687	OsI_06379	A2WPB5	B8AE76	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.579
OsI_01687	OsI_06381	A2WPB5	B8AE78	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.579
OsI_01687	OsI_06426	A2WPB5	A2X2K9	Ubiquitin-like domain-containing protein.	Skp1 domain-containing protein.	0.633
OsI_01687	OsI_09656	A2WPB5	A2XBJ7	Ubiquitin-like domain-containing protein.	Skp1 domain-containing protein; Belongs to the SKP1 family.	0.633
OsI_01687	OsI_10169	A2WPB5	B8APA0	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.579
OsI_01687	OsI_10433	A2WPB5	B8AQF0	Ubiquitin-like domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.531
OsI_01687	OsI_11885	A2WPB5	B8AQM9	Ubiquitin-like domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.531
OsI_01687	OsI_12618	A2WPB5	B8AMJ5	Ubiquitin-like domain-containing protein.	Cyclin_C domain-containing protein.	0.531
OsI_01687	OsI_12620	A2WPB5	A2XJK5	Ubiquitin-like domain-containing protein.	Cyclin N-terminal domain-containing protein.	0.531
OsI_01687	OsI_13435	A2WPB5	B8AR48	Ubiquitin-like domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.665
OsI_01687	OsI_21341	A2WPB5	A2Y8G2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.633
OsI_01687	OsI_21357	A2WPB5	B8B1K6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.633
OsI_01687	OsI_21358	A2WPB5	A2Y8I0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.633
OsI_01687	OsI_21360	A2WPB5	B8B1K7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.633
OsI_01687	OsI_21362	A2WPB5	B8B1K9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.633
OsI_01687	OsI_21366	A2WPB5	A2Y8I6	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.633
OsI_01687	OsI_21849	A2WPB5	B8B3E6	Ubiquitin-like domain-containing protein.	MAT1 domain-containing protein.	0.638
OsI_01687	OsI_22173	A2WPB5	B8B403	Ubiquitin-like domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.531

page 1 of 95

Server load: low (26%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About