STRINGSTRING
OsI_09984 OsI_09984 OsI_11560 OsI_11560 OsI_10554 OsI_10554 OsI_16498 OsI_16498 OsI_17026 OsI_17026 OsI_20887 OsI_20887 OsI_18166 OsI_18166 OsI_21216 OsI_21216 OsI_19738 OsI_19738 OsI_18564 OsI_18564 OsI_20205 OsI_20205 OsI_20370 OsI_20370 OsI_20723 OsI_20723 OsI_24262 OsI_24262 OsI_23219 OsI_23219 OsI_27205 OsI_27205 OsI_27267 OsI_27267 OsI_24654 OsI_24654 OsI_25208 OsI_25208 OsI_25344 OsI_25344 OsI_27632 OsI_27632 OsI_29256 OsI_29256 OsI_27885 OsI_27885 OsI_27932 OsI_27932 OsI_28022 OsI_28022 OsI_29518 OsI_29518 OsI_29519 OsI_29519 OsI_31880 OsI_31880 OsI_33786 OsI_33786 OsI_33881 OsI_33881 OsI_34031 OsI_34031 OsI_34140 OsI_34140 OsI_35669 OsI_35669 OsI_34758 OsI_34758 OsI_36544 OsI_36544 OsI_38467 OsI_38467 OsI_37592 OsI_37592 OsI_37949 OsI_37949 OsI_00350 OsI_00350 OsI_00362 OsI_00362 OsI_01687 OsI_01687 OsI_02297 OsI_02297 OsI_02601 OsI_02601 OsI_02952 OsI_02952 OsI_03798 OsI_03798 OsI_05697 OsI_05697 OsI_06110 OsI_06110 OsI_07371 OsI_07371 OsI_09147 OsI_09147 OsI_09344 OsI_09344 OsI_09678 OsI_09678 cdc48 cdc48 OsI_10518 OsI_10518 OsI_11070 OsI_11070 OsI_11178 OsI_11178 OsI_13151 OsI_13151 OsI_13856 OsI_13856 OsI_14707 OsI_14707 OsI_16639 OsI_16639 OsI_17067 OsI_17067 OsI_20371 OsI_20371 OsI_21263 OsI_21263 OsI_28067 OsI_28067 OsI_30118 OsI_30118 OsI_31316 OsI_31316 OsI_32069 OsI_32069 OsI_32447 OsI_32447 OsI_33558 OsI_33558 OsI_33783 OsI_33783 OsI_37160 OsI_37160 OsI_37665 OsI_37665 OsI_37801 OsI_37801 OsI_38032 OsI_38032 OsI_38033 OsI_38033 OsI_03330 OsI_03330 OsI_03534 OsI_03534 OsI_05060 OsI_05060 OsI_03625 OsI_03625 OsI_02570 OsI_02570 OsI_02599 OsI_02599 OsI_04360 OsI_04360 OsI_09388 OsI_09388 OsI_06666 OsI_06666 OsI_08618 OsI_08618 OsI_07319 OsI_07319 OsI_08877 OsI_08877 OsI_07377 OsI_07377 OsI_09136 OsI_09136 OsI_10837 OsI_10837 OsI_12160 OsI_12160 OsI_13805 OsI_13805 OsI_10008 OsI_10008
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_09984Uncharacterized protein. (992 aa)
OsI_11560Uncharacterized protein. (260 aa)
OsI_10554SprT-like domain-containing protein. (444 aa)
OsI_16498Uncharacterized protein; Belongs to the AAA ATPase family. (576 aa)
OsI_17026AAA domain-containing protein. (335 aa)
OsI_20887Uncharacterized protein. (1214 aa)
OsI_18166Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (988 aa)
OsI_21216CPSF_A domain-containing protein. (1089 aa)
OsI_19738AAA domain-containing protein; Belongs to the AAA ATPase family. (298 aa)
OsI_18564DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (533 aa)
OsI_20205Ubiquitin-like domain-containing protein. (83 aa)
OsI_20370Uncharacterized protein. (210 aa)
OsI_20723DNA_pol3_gamma3 domain-containing protein. (1079 aa)
OsI_24262DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1100 aa)
OsI_23219Rep_fac-A_C domain-containing protein. (667 aa)
OsI_27205Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (737 aa)
OsI_27267DNA polymerase. (1797 aa)
OsI_24654Rep_fac-A_C domain-containing protein. (298 aa)
OsI_25208DUF223 domain-containing protein. (376 aa)
OsI_25344Uncharacterized protein. (316 aa)
OsI_27632AAA domain-containing protein. (811 aa)
OsI_29256Uncharacterized protein. (837 aa)
OsI_27885NAC domain-containing protein. (738 aa)
OsI_27932Uncharacterized protein. (122 aa)
OsI_28022Uncharacterized protein. (705 aa)
OsI_29518Uncharacterized protein. (131 aa)
OsI_29519DNA_pol_E_B domain-containing protein. (293 aa)
OsI_31880Uncharacterized protein. (330 aa)
OsI_33786Uncharacterized protein. (755 aa)
OsI_33881Uncharacterized protein. (266 aa)
OsI_34031NAC domain-containing protein. (271 aa)
OsI_34140Ubiquitin-like domain-containing protein. (81 aa)
OsI_35669DNA_pol3_gamma3 domain-containing protein. (860 aa)
OsI_34758Uncharacterized protein. (648 aa)
OsI_36544Replication factor C subunit 1. (1014 aa)
OsI_38467Uncharacterized protein. (202 aa)
OsI_37592WD_REPEATS_REGION domain-containing protein. (752 aa)
OsI_37949Uncharacterized protein. (306 aa)
OsI_00350Uncharacterized protein. (223 aa)
OsI_00362Uncharacterized protein. (281 aa)
OsI_01687Ubiquitin-like domain-containing protein. (155 aa)
OsI_02297Uncharacterized protein. (504 aa)
OsI_02601Uncharacterized protein. (314 aa)
OsI_02952Uncharacterized protein. (410 aa)
OsI_03798UmuC domain-containing protein. (498 aa)
OsI_05697NAC domain-containing protein. (301 aa)
OsI_06110Uncharacterized protein. (315 aa)
OsI_07371DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (152 aa)
OsI_09147Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (658 aa)
OsI_09344Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
OsI_09678NAC domain-containing protein. (295 aa)
cdc48AAA-ATPase. (809 aa)
OsI_10518Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
OsI_11070Uncharacterized protein. (135 aa)
OsI_11178Uncharacterized protein. (116 aa)
OsI_13151WD_REPEATS_REGION domain-containing protein. (521 aa)
OsI_13856AAA domain-containing protein. (354 aa)
OsI_14707Uncharacterized protein. (455 aa)
OsI_16639NAC domain-containing protein. (278 aa)
OsI_17067Uncharacterized protein. (320 aa)
OsI_20371Uncharacterized protein. (261 aa)
OsI_21263NAC domain-containing protein. (683 aa)
OsI_28067Ubiquitin-like domain-containing protein. (253 aa)
OsI_30118Uncharacterized protein. (138 aa)
OsI_31316SprT-like domain-containing protein. (670 aa)
OsI_32069Uncharacterized protein. (131 aa)
OsI_32447CBFD_NFYB_HMF domain-containing protein. (167 aa)
OsI_33558NAC domain-containing protein. (543 aa)
OsI_33783CDC48_N domain-containing protein. (75 aa)
OsI_37160Uncharacterized protein. (567 aa)
OsI_37665AAA domain-containing protein. (339 aa)
OsI_37801DNA_pol3_gamma3 domain-containing protein. (1174 aa)
OsI_38032AAA domain-containing protein. (950 aa)
OsI_38033Uncharacterized protein. (195 aa)
OsI_03330Uncharacterized protein. (1236 aa)
OsI_03534Uncharacterized protein. (303 aa)
OsI_05060Uncharacterized protein. (157 aa)
OsI_03625DNA_pol3_gamma3 domain-containing protein. (815 aa)
OsI_02570Uncharacterized protein. (102 aa)
OsI_02599Uncharacterized protein. (274 aa)
OsI_04360Uncharacterized protein. (397 aa)
OsI_09388NAC domain-containing protein. (331 aa)
OsI_06666ANK_REP_REGION domain-containing protein. (455 aa)
OsI_08618Uncharacterized protein. (729 aa)
OsI_07319Rep_fac-A_C domain-containing protein. (431 aa)
OsI_08877AAA domain-containing protein; Belongs to the AAA ATPase family. (612 aa)
OsI_07377DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2081 aa)
OsI_09136AAA domain-containing protein. (361 aa)
OsI_10837AAA domain-containing protein. (1250 aa)
OsI_12160Uncharacterized protein. (677 aa)
OsI_13805CULLIN_2 domain-containing protein; Belongs to the cullin family. (744 aa)
OsI_10008Uncharacterized protein. (454 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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