STRINGSTRING
OsI_06773 OsI_06773 OsI_04838 OsI_04838 OsI_34203 OsI_34203 OsI_33812 OsI_33812 PAD1 PAD1 OsI_029135 OsI_029135 OsI_28284 OsI_28284 OsI_28067 OsI_28067 OsI_24663 OsI_24663 OsI_21564 OsI_21564 OsI_21178 OsI_21178 OsI_18743 OsI_18743 OsI_17942 OsI_17942 OsI_17319 OsI_17319 OsI_10924 OsI_10924 OsI_09094 OsI_09094 OsI_03761 OsI_03761 OsI_01687 OsI_01687 OsI_34680 OsI_34680 OsI_34140 OsI_34140 OsI_28384 OsI_28384 OsI_26407 OsI_26407 OsI_26078 OsI_26078 OsI_27211 OsI_27211 OsI_27210 OsI_27210 OsI_25623 OsI_25623 OsI_21721 OsI_21721 OsI_21607 OsI_21607 OsI_22743 OsI_22743 OsI_22659 OsI_22659 OsI_20205 OsI_20205 OsI_20936 OsI_20936 OsI_14770 OsI_14770 OsI_10461 OsI_10461 OsI_13642 OsI_13642 OsI_13634 OsI_13634 OsI_05919 OsI_05919 OsI_05746 OsI_05746
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_06773Tr-type G domain-containing protein. (661 aa)
OsI_04838RING-type domain-containing protein. (252 aa)
OsI_34203RING-type domain-containing protein. (242 aa)
OsI_33812Uncharacterized protein. (166 aa)
PAD1Proteasome subunit alpha type-7-B; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (249 aa)
OsI_029135Proteasome subunit alpha type-7-A; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (249 aa)
OsI_2828426S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (987 aa)
OsI_28067Ubiquitin-like domain-containing protein. (253 aa)
OsI_24663Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (384 aa)
OsI_21564Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (246 aa)
OsI_21178Uncharacterized protein. (500 aa)
OsI_18743Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (272 aa)
OsI_17942RING-type domain-containing protein. (255 aa)
OsI_1731926S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1019 aa)
OsI_10924RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (540 aa)
OsI_09094Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (246 aa)
OsI_03761Tr-type G domain-containing protein. (664 aa)
OsI_01687Ubiquitin-like domain-containing protein. (155 aa)
OsI_34680Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (280 aa)
OsI_34140Ubiquitin-like domain-containing protein. (81 aa)
OsI_28384RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (537 aa)
OsI_26407PI31_Prot_N domain-containing protein. (292 aa)
OsI_26078Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (286 aa)
OsI_27211RING-type domain-containing protein. (262 aa)
OsI_27210Uncharacterized protein. (62 aa)
OsI_25623Uncharacterized protein. (184 aa)
OsI_21721Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (277 aa)
OsI_21607Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily. (648 aa)
OsI_22743Uncharacterized protein. (368 aa)
OsI_22659Uncharacterized protein. (1813 aa)
OsI_20205Ubiquitin-like domain-containing protein. (83 aa)
OsI_20936Uncharacterized protein. (526 aa)
OsI_14770RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (563 aa)
OsI_10461Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (311 aa)
OsI_13642Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (408 aa)
OsI_13634Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (388 aa)
OsI_05919Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily. (636 aa)
OsI_05746Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (270 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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