STRINGSTRING
OsI_38739 OsI_38739 OsI_03819 OsI_03819 OsI_04630 OsI_04630 OsI_05631 OsI_05631 OsI_12217 OsI_12217 OsI_14054 OsI_14054 OsI_14345 OsI_14345 OsI_16097 OsI_16097 OsI_16102 OsI_16102 OsI_18482 OsI_18482 OsI_19469 OsI_19469 OsI_22888 OsI_22888 OsI_25053 OsI_25053 OsI_25194 OsI_25194 OsI_25195 OsI_25195 OsI_28994 OsI_28994 OsI_29770 OsI_29770 OsI_30907 OsI_30907 OsI_31716 OsI_31716 OsI_32722 OsI_32722 OsI_35999 OsI_35999 OsI_37607 OsI_37607 OsI_38072 OsI_38072 OsI_03318 OsI_03318 OsI_13440 OsI_13440 OsI_09621 OsI_09621 OsI_14442 OsI_14442 OsI_17482 OsI_17482 OsI_20056 OsI_20056 OsI_19244 OsI_19244 OsI_27396 OsI_27396 OsI_26227 OsI_26227 OsI_26609 OsI_26609 OsI_28993 OsI_28993 OsI_38205 OsI_38205 OsI_28995 OsI_28995 OsI_28223 OsI_28223 OsI_31573 OsI_31573 OsI_36122 OsI_36122 OsI_36566 OsI_36566
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_38739Rhodanese domain-containing protein. (624 aa)
OsI_03819AAA domain-containing protein. (1002 aa)
OsI_04630SHMT domain-containing protein. (600 aa)
OsI_05631Uncharacterized protein. (371 aa)
OsI_12217Uncharacterized protein. (194 aa)
OsI_14054Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (594 aa)
OsI_14345Uncharacterized protein. (214 aa)
OsI_16097FSH1 domain-containing protein. (245 aa)
OsI_16102Uncharacterized protein. (110 aa)
OsI_18482Uncharacterized protein. (292 aa)
OsI_19469Rhodanese domain-containing protein. (462 aa)
OsI_22888Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (531 aa)
OsI_25053HNHc domain-containing protein. (282 aa)
OsI_25194Uncharacterized protein. (246 aa)
OsI_25195Uncharacterized protein. (226 aa)
OsI_28994SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (222 aa)
OsI_29770Formyl_trans_N domain-containing protein. (290 aa)
OsI_30907Uncharacterized protein. (395 aa)
OsI_31716Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] (446 aa)
OsI_32722Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. (346 aa)
OsI_35999Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (347 aa)
OsI_37607Uncharacterized protein. (350 aa)
OsI_38072SHMT domain-containing protein. (294 aa)
OsI_03318Uncharacterized protein. (362 aa)
OsI_13440Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (513 aa)
OsI_09621Formyl_trans_N domain-containing protein. (303 aa)
OsI_14442Rhodanese domain-containing protein. (426 aa)
OsI_17482Uncharacterized protein. (246 aa)
OsI_20056Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (571 aa)
OsI_19244Formyl_trans_N domain-containing protein. (238 aa)
OsI_27396FSH1 domain-containing protein. (247 aa)
OsI_26227Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (1334 aa)
OsI_26609Uncharacterized protein. (199 aa)
OsI_28993SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (259 aa)
OsI_38205Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. (494 aa)
OsI_28995PUA domain-containing protein. (293 aa)
OsI_28223MGS domain-containing protein. (587 aa)
OsI_31573Uncharacterized protein. (639 aa)
OsI_36122DHFR domain-containing protein. (404 aa)
OsI_36566Uncharacterized protein. (957 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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