(27 nodes) Glucosinolate biosynthesis network (Oryza sativa Indica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_01880	Uncharacterized protein. (445 aa)
	OsI_34568	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (409 aa)
	OsI_32060	Uncharacterized protein. (199 aa)
	OsI_32059	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (471 aa)
	OsI_32058	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (500 aa)
	OsI_32057	UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family. (237 aa)
	OsI_32056	Uncharacterized protein. (257 aa)
	OsI_14865	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (466 aa)
	OsI_14864	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (462 aa)
	OsI_14863	Uncharacterized protein. (346 aa)
	OsI_12308	Uncharacterized protein; Belongs to the cytochrome P450 family. (216 aa)
	OsI_10629	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (415 aa)
	OsI_09649	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (405 aa)
	OsI_11647	Uncharacterized protein. (563 aa)
	OsI_14866	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (470 aa)
	OsI_14852	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (469 aa)
	OsI_20943	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (409 aa)
	OsI_32061	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (416 aa)
	OsI_31213	Uncharacterized protein. (264 aa)
	OsI_36324	Uncharacterized protein. (92 aa)
	OsI_15061	Uncharacterized protein. (126 aa)
	OsI_15062	Uncharacterized protein; Belongs to the cytochrome P450 family. (376 aa)
	OsI_16961	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (410 aa)
	OsI_12311	Uncharacterized protein. (511 aa)
	OsI_05669	Aconitase domain-containing protein. (514 aa)
	OsI_09370	Uncharacterized protein; Belongs to the cytochrome P450 family. (519 aa)
	OsI_07712	Uncharacterized protein. (174 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_05669	OsI_09649	B8AGY8	A2XBJ1	Aconitase domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.436
OsI_05669	OsI_10629	B8AGY8	A2XE78	Aconitase domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.436
OsI_05669	OsI_11647	B8AGY8	B8APV3	Aconitase domain-containing protein.	Uncharacterized protein.	0.436
OsI_05669	OsI_16961	B8AGY8	B8ASX0	Aconitase domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.436
OsI_05669	OsI_20943	B8AGY8	B8AWI0	Aconitase domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.436
OsI_05669	OsI_34568	B8AGY8	A2ZA03	Aconitase domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.436
OsI_09649	OsI_05669	A2XBJ1	B8AGY8	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Aconitase domain-containing protein.	0.436
OsI_09649	OsI_10629	A2XBJ1	A2XE78	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.875
OsI_09649	OsI_16961	A2XBJ1	B8ASX0	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.829
OsI_09649	OsI_20943	A2XBJ1	B8AWI0	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.827
OsI_09649	OsI_34568	A2XBJ1	A2ZA03	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.827
OsI_10629	OsI_05669	A2XE78	B8AGY8	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Aconitase domain-containing protein.	0.436
OsI_10629	OsI_09649	A2XE78	A2XBJ1	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.875
OsI_10629	OsI_16961	A2XE78	B8ASX0	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.944
OsI_10629	OsI_20943	A2XE78	B8AWI0	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.911
OsI_10629	OsI_34568	A2XE78	A2ZA03	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.911
OsI_11647	OsI_05669	B8APV3	B8AGY8	Uncharacterized protein.	Aconitase domain-containing protein.	0.436
OsI_12308	OsI_15062	A2XIP7	B8AR68	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.623
OsI_12311	OsI_15062	B8AKU8	B8AR68	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.628
OsI_15062	OsI_12308	B8AR68	A2XIP7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.623

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