STRINGSTRING
A0A0P0WFP5 A0A0P0WFP5 A0A0P0X9F5 A0A0P0X9F5 Q0J0M9_ORYSJ Q0J0M9_ORYSJ Q0JGJ6_ORYSJ Q0JGJ6_ORYSJ Q2QTK4_ORYSJ Q2QTK4_ORYSJ GCN5 GCN5 Q5W6G3_ORYSJ Q5W6G3_ORYSJ OJ1320_D10.4 OJ1320_D10.4 Q67UR9_ORYSJ Q67UR9_ORYSJ ADA2 ADA2 Q84SZ4_ORYSJ Q84SZ4_ORYSJ Q8H5X9_ORYSJ Q8H5X9_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0WFP5Os04g0647300 protein. (591 aa)
A0A0P0X9F5Os07g0645200 protein. (294 aa)
Q0J0M9_ORYSJcDNA clone:J013114B09, full insert sequence. (427 aa)
Q0JGJ6_ORYSJTranscription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (113 aa)
Q2QTK4_ORYSJcDNA clone:J033063H10, full insert sequence. (285 aa)
GCN5Histone acetyltransferase GCN5; Acetylates histone H3. Acetylation of histones gives a specific tag for epigenetic transcription activation. Operates in concert with certain DNA-binding transcriptional activators. Acts via the formation of large multiprotein complexes that modify the chromatin (By similarity). (511 aa)
Q5W6G3_ORYSJSAGA-associated factor 11. (187 aa)
OJ1320_D10.4TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). (634 aa)
Q67UR9_ORYSJOs06g0649500 protein. (654 aa)
ADA2Transcriptional adapter ADA2; Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known. ADA2 and GCN5 function to acetylate nucleosomes, opening up the promoter region (By similarity). (567 aa)
Q84SZ4_ORYSJcDNA clone:J013132N21, full insert sequence. (681 aa)
Q8H5X9_ORYSJOs07g0612500 protein. (425 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.