Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A0P0VD80 | A0A0P0WJH1 | A0A0P0VD80 | A0A0P0WJH1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os05g0224700 protein. | 0.869 |
| A0A0P0VD80 | B7F9H3_ORYSJ | A0A0P0VD80 | B7F9H3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA, clone: J080032M07, full insert sequence. | 0.949 |
| A0A0P0VD80 | OsJ_17019 | A0A0P0VD80 | Q6AVZ9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog; Putative RNA polymerase II subunit B1 C-terminal domain (CTD) phosphatase involved in RNA polymerase II transcription regulation. Belongs to the RPAP2 family. | 0.832 |
| A0A0P0VD80 | Q0IMM9_ORYSJ | A0A0P0VD80 | Q0IMM9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os12g0560400 protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.895 |
| A0A0P0VD80 | Q0J7Q4_ORYSJ | A0A0P0VD80 | Q0J7Q4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os08g0171600 protein. | 0.951 |
| A0A0P0VD80 | Q53LH8_ORYSJ | A0A0P0VD80 | Q53LH8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative, expressed. | 0.963 |
| A0A0P0VD80 | Q5VQW7_ORYSJ | A0A0P0VD80 | Q5VQW7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:006-211-F07, full insert sequence. | 0.973 |
| A0A0P0VD80 | Q6ATY6_ORYSJ | A0A0P0VD80 | Q6ATY6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:J023138C10, full insert sequence. | 0.869 |
| A0A0P0VD80 | Q6F2V1_ORYSJ | A0A0P0VD80 | Q6F2V1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative, expressed. | 0.959 |
| A0A0P0VD80 | Q6YX88_ORYSJ | A0A0P0VD80 | Q6YX88 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:006-305-H09, full insert sequence. | 0.966 |
| A0A0P0VD80 | Q6ZA50_ORYSJ | A0A0P0VD80 | Q6ZA50 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:J013053F13, full insert sequence. | 0.954 |
| A0A0P0VD80 | Q6ZGM1_ORYSJ | A0A0P0VD80 | Q6ZGM1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:J023131N03, full insert sequence. | 0.957 |
| A0A0P0VD80 | Q8GSD5_ORYSJ | A0A0P0VD80 | Q8GSD5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.895 |
| A0A0P0VD80 | Q8LHK9_ORYSJ | A0A0P0VD80 | Q8LHK9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | 0.896 |
| A0A0P0WJH1 | A0A0P0VD80 | A0A0P0WJH1 | A0A0P0VD80 | Os05g0224700 protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.869 |
| A0A0P0WJH1 | B7F9H3_ORYSJ | A0A0P0WJH1 | B7F9H3 | Os05g0224700 protein. | cDNA, clone: J080032M07, full insert sequence. | 0.950 |
| A0A0P0WJH1 | OsJ_17019 | A0A0P0WJH1 | Q6AVZ9 | Os05g0224700 protein. | Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog; Putative RNA polymerase II subunit B1 C-terminal domain (CTD) phosphatase involved in RNA polymerase II transcription regulation. Belongs to the RPAP2 family. | 0.955 |
| A0A0P0WJH1 | Q0IMM9_ORYSJ | A0A0P0WJH1 | Q0IMM9 | Os05g0224700 protein. | Os12g0560400 protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.929 |
| A0A0P0WJH1 | Q0J7Q4_ORYSJ | A0A0P0WJH1 | Q0J7Q4 | Os05g0224700 protein. | Os08g0171600 protein. | 0.905 |
| A0A0P0WJH1 | Q53LH8_ORYSJ | A0A0P0WJH1 | Q53LH8 | Os05g0224700 protein. | DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative, expressed. | 0.933 |
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