STRINGSTRING
A0A0P0VF30 A0A0P0VF30 A0A0P0W7G3 A0A0P0W7G3 A0A0P0W7H2 A0A0P0W7H2 A0A0P0X005 A0A0P0X005 A0A0P0X0E0 A0A0P0X0E0 A0A0P0X6U8 A0A0P0X6U8 A0A0P0XQE9 A0A0P0XQE9 A0A0P0XW22 A0A0P0XW22 C7J0Z3_ORYSJ C7J0Z3_ORYSJ RUB1 RUB1 RUB2 RUB2 RUB3 RUB3 Ub-CEP52-1 Ub-CEP52-1 Ub-CEP52-2 Ub-CEP52-2 RPS27AB RPS27AB Q0J434_ORYSJ Q0J434_ORYSJ Q10E03_ORYSJ Q10E03_ORYSJ Q67V00_ORYSJ Q67V00_ORYSJ ATG8E ATG8E Q6K9N9_ORYSJ Q6K9N9_ORYSJ ATG8C ATG8C Q6Z667_ORYSJ Q6Z667_ORYSJ Q6ZH84_ORYSJ Q6ZH84_ORYSJ Q7XK43_ORYSJ Q7XK43_ORYSJ UBC5B UBC5B RPS27AA RPS27AA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0VF30Os02g0161900 protein. (484 aa)
A0A0P0W7G3Os04g0217900 protein. (176 aa)
A0A0P0W7H2Os04g0218900 protein. (338 aa)
A0A0P0X005Os06g0681400 protein. (556 aa)
A0A0P0X0E0Os06g0673500 protein. (209 aa)
A0A0P0X6U8Os07g0489500 protein. (254 aa)
A0A0P0XQE9Os09g0512450 protein. (183 aa)
A0A0P0XW22Os10g0491500 protein. (156 aa)
C7J0Z3_ORYSJOs04g0174200 protein. (73 aa)
RUB1Ubiquitin-NEDD8-like protein RUB1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved i [...] (153 aa)
RUB2Ubiquitin-NEDD8-like protein RUB2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved i [...] (153 aa)
RUB3Ubiquitin-like protein-NEDD8-like protein RUB3; [Ubiquitin-like protein]: Involved in the ATP-dependent selective degradation of cellular proteins, the maintenance of chromatin structure, the regulation of gene expression, the stress response, and ribosome biogenesis; Belongs to the ubiquitin family. (154 aa)
Ub-CEP52-1Ubiquitin-60S ribosomal protein L40-1; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is inv [...] (129 aa)
Ub-CEP52-2Ubiquitin-60S ribosomal protein L40-2; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is inv [...] (129 aa)
RPS27ABUbiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
Q0J434_ORYSJOs08g0537800 protein. (216 aa)
Q10E03_ORYSJUbiquitin-conjugating enzyme family protein, expressed. (161 aa)
Q67V00_ORYSJOs09g0452700 protein. (140 aa)
ATG8EPutative autophagy-related protein 8E; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (87 aa)
Q6K9N9_ORYSJcDNA clone:J023012G01, full insert sequence. (408 aa)
ATG8CAutophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (120 aa)
Q6Z667_ORYSJOs02g0721200 protein. (249 aa)
Q6ZH84_ORYSJcDNA clone:J013072E12, full insert sequence. (845 aa)
Q7XK43_ORYSJOs04g0476800 protein. (881 aa)
UBC5BUbiquitin-conjugating enzyme E2 5B; E2 conjugating enzyme that associates with the E3 ubiquitin- protein ligase EL5 to mediates ubiquitination of target proteins. (148 aa)
RPS27AAUbiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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