STRINGSTRING
A0A0N7KF87 A0A0N7KF87 A0A0N7KLX4 A0A0N7KLX4 A0A0P0W0K7 A0A0P0W0K7 A0A0P0X2I9 A0A0P0X2I9 Q0DJC2_ORYSJ Q0DJC2_ORYSJ Q0DY89_ORYSJ Q0DY89_ORYSJ Q0DY90_ORYSJ Q0DY90_ORYSJ EMF2A EMF2A MSI1 MSI1 EZ1 EZ1 SE14 SE14 JMJ706 JMJ706 JMJ703 JMJ703 CLF CLF Q657G5_ORYSJ Q657G5_ORYSJ EMF2B EMF2B FIE1 FIE1 FIE2 FIE2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0N7KF87Os02g0457100 protein. (149 aa)
A0A0N7KLX4Os06g0275250 protein. (123 aa)
A0A0P0W0K7Os03g0640201 protein. (149 aa)
A0A0P0X2I9Os07g0139700 protein. (221 aa)
Q0DJC2_ORYSJOs05g0302300 protein. (971 aa)
Q0DY89_ORYSJOs02g0708600 protein. (563 aa)
Q0DY90_ORYSJcDNA clone:002-114-G07, full insert sequence. (436 aa)
EMF2APolycomb group protein EMF2A; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. (624 aa)
MSI1Histone-binding protein MSI1 homolog; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism such as the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair (By similarity). (428 aa)
EZ1Histone-lysine N-methyltransferase EZ1; Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development (Probable). Involved in the regulation of flowering. Promotes flowering under short day ( [...] (895 aa)
SE14Lysine-specific demethylase SE14; Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3. Involved in the control of flowering time. Has a suppressive effect on floral transition under long day conditions through the demethylation of H3K4me3 in the promoter region of the flower-promoting signal HD3B/RFT1. (1487 aa)
JMJ706Lysine-specific demethylase JMJ706; Histone demethylase that demethylates 'Lys-9' (H3K9me) of histone H3 with a specific activity for H3K9me3 and H3K9me2. No activity on H3K4me3, H3K9me1, H3K27me2 and H3K36me3/2. Involved in the control of floral organ development by demethylating H3K9me3 and H3K9me2 in the promoter regions of DH1 and MADS47. The 'Lys-9' demethylation of these two genes is required for induction of their expression. (858 aa)
JMJ703Lysine-specific demethylase JMJ703; Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3 with a specific activity for H3K4me3, H3K4me2 and H3K4me1. No activity on H3K9me3/2/1, H3K27me3/2/1 and H3K36me3/2/1. Involved in the control of stem elongation by regulating methylation states of H3K4me3 on cytokinin oxidase (CKX) gene family, which may cause increased expression of CKX genes and reduced cytokinin levels. Prevents ectopic retrotransposition by regulating the levels of H3K4me3 in two non-LTR retrotransposons KARMA and LINE-1 (L1) and reinforcing their repressed states. (1238 aa)
CLFHistone-lysine N-methyltransferase CLF; Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development (Probable). Involved in the regulation of flowering. Represses flowering under long day ( [...] (896 aa)
Q657G5_ORYSJOs01g0324400 protein. (85 aa)
EMF2BPolycomb group protein EMF2B; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility (Probable). Polycomb group (PcG) protein involved in the repression of flowering under long day (LD) conditions. Regulates floret development ; Belongs to th [...] (604 aa)
FIE1Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Together with EZ1 and CLF forms a complex that is involved in gene transcriptional repression by trimethylation on histone H3 'Lys-27' (H3K27me3) of target g [...] (466 aa)
FIE2Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Involved in the regulation of seed endosperm development, grain filling and seed dormancy. FIE2-containing PcG complex in seed endosperm regulates the expres [...] (376 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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