STRINGSTRING
DMC1A DMC1A Q9FTK2_ORYSJ Q9FTK2_ORYSJ Q9AWX8_ORYSJ Q9AWX8_ORYSJ OsRad51A1 OsRad51A1 OsRad51A2 OsRad51A2 MUS81 MUS81 SPO11-1 SPO11-1 Q7XUF3_ORYSJ Q7XUF3_ORYSJ Q7XS44_ORYSJ Q7XS44_ORYSJ RMI1 RMI1 MRE11 MRE11 Q7XPZ2_ORYSJ Q7XPZ2_ORYSJ NBS1 NBS1 NRP1_ORYSJ NRP1_ORYSJ DMC1B DMC1B Q7EZT4_ORYSJ Q7EZT4_ORYSJ FAS2 FAS2 RPA1A RPA1A XRCC3 XRCC3 RIX4 RIX4 MCM5 MCM5 RPA2A RPA2A Q6I632_ORYSJ Q6I632_ORYSJ RPA2B RPA2B Q6H792_ORYSJ Q6H792_ORYSJ OJ1384_A02.2 OJ1384_A02.2 Q6EPR6_ORYSJ Q6EPR6_ORYSJ Q6AUG5_ORYSJ Q6AUG5_ORYSJ MCM9 MCM9 B1342F01.10 B1342F01.10 RPA1C RPA1C Q60F40_ORYSJ Q60F40_ORYSJ RPA2C RPA2C Q5WN04_ORYSJ Q5WN04_ORYSJ NAP1;1 NAP1;1 Q5N861_ORYSJ Q5N861_ORYSJ Q5KQG5_ORYSJ Q5KQG5_ORYSJ MCM4 MCM4 NAP1;2 NAP1;2 Q337B1_ORYSJ Q337B1_ORYSJ Q2RB27_ORYSJ Q2RB27_ORYSJ Q2RB11_ORYSJ Q2RB11_ORYSJ MCM2 MCM2 Q2QZT4_ORYSJ Q2QZT4_ORYSJ Q2QYC3_ORYSJ Q2QYC3_ORYSJ Q2QX93_ORYSJ Q2QX93_ORYSJ MCM7 MCM7 Q10T60_ORYSJ Q10T60_ORYSJ Q10T59_ORYSJ Q10T59_ORYSJ RPA1B RPA1B Q0JQF9_ORYSJ Q0JQF9_ORYSJ Q0JQF8_ORYSJ Q0JQF8_ORYSJ Q0JNQ2_ORYSJ Q0JNQ2_ORYSJ Q0IVM6_ORYSJ Q0IVM6_ORYSJ Q0IQ60_ORYSJ Q0IQ60_ORYSJ Q0DIM8_ORYSJ Q0DIM8_ORYSJ MCM3 MCM3 Q0DGU0_ORYSJ Q0DGU0_ORYSJ Q0D3Q0_ORYSJ Q0D3Q0_ORYSJ B9GBN5_ORYSJ B9GBN5_ORYSJ B9FU48_ORYSJ B9FU48_ORYSJ OsJ_21957 OsJ_21957 B9FFT7_ORYSJ B9FFT7_ORYSJ B7F8Z9_ORYSJ B7F8Z9_ORYSJ B7EZI6_ORYSJ B7EZI6_ORYSJ RAD54 RAD54 NAP1;3 NAP1;3 A0A0P0Y3Q2 A0A0P0Y3Q2 A0A0P0Y3J4 A0A0P0Y3J4 A0A0P0Y3J1 A0A0P0Y3J1 A0A0P0Y3H7 A0A0P0Y3H7 A0A0P0XZP0 A0A0P0XZP0 A0A0P0XYY7 A0A0P0XYY7 A0A0P0XXA1 A0A0P0XXA1 A0A0P0XV57 A0A0P0XV57 A0A0P0XQ11 A0A0P0XQ11 A0A0P0XJA8 A0A0P0XJA8 A0A0P0X3J1 A0A0P0X3J1 A0A0P0X1V3 A0A0P0X1V3 A0A0P0WMG8 A0A0P0WMG8 A0A0P0WHT3 A0A0P0WHT3 A0A0P0WGZ9 A0A0P0WGZ9 A0A0P0WAF3 A0A0P0WAF3 A0A0P0VQJ4 A0A0P0VQJ4 A0A0P0VQF0 A0A0P0VQF0 A0A0P0VQB6 A0A0P0VQB6 A0A0P0V4Q8 A0A0P0V4Q8 A0A0N7KTF0 A0A0N7KTF0 A0A0N7KN59 A0A0N7KN59 A0A0N7KKD8 A0A0N7KKD8 A0A0N7KD76 A0A0N7KD76 RAD51D RAD51D
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
DMC1AMeiotic recombination protein DMC1 homolog A; Recombinase that may participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks (Probable). Exhibits DNA-dependent ATPase activity when bound to single-stranded DNA (ssDNA). Mediates renaturation of homologous complementary strands as well as assimilation of single strands into homologous supercoiled duplexes leading to D-loop formation. Binds circular single-stranded DNA (ssDNA) and circular double-stranded DNA (dsDNA) in vitro. Catalyzes DNA ho [...] (344 aa)
Q9FTK2_ORYSJDNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (211 aa)
Q9AWX8_ORYSJcDNA clone:006-202-D10, full insert sequence. (349 aa)
OsRad51A1DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. (339 aa)
OsRad51A2DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. (341 aa)
MUS81Crossover junction endonuclease MUS81; Interacts with EME1 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks, nicked Holliday junctions and also intact Holliday junctions with a reduced efficiency. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. Plays a role in DNA repair and in genotoxic stress-induced homologous recombination (HR) in somatic cells. Mediates a subset of meioti [...] (660 aa)
SPO11-1Meiotic recombination protein SPO11-1; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. Is essential for both homologous chromosomes pairing and crossover formation during meiosis; Belongs to the TOP6A family. (381 aa)
Q7XUF3_ORYSJcDNA clone:J033043K15, full insert sequence. (749 aa)
Q7XS44_ORYSJCheckpoint protein; Belongs to the HUS1 family. (326 aa)
RMI1RecQ-mediated genome instability protein 1; Essential component of the RMI complex, a complex that plays an important role in the resolution step of homologous recombination, in a process called Holliday Junction dissolution, to limit DNA crossover formation in cells; Belongs to the RMI1 family. (817 aa)
MRE11Double-strand break repair protein MRE11; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. Belongs to the MRE11/RAD32 family. (705 aa)
Q7XPZ2_ORYSJcDNA clone:J033122C24, full insert sequence. (629 aa)
NBS1Nijmegen breakage syndrome 1 protein; Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis. (560 aa)
NRP1_ORYSJNAP1-related protein 1; Acts as histone H2A/H2B chaperone in nucleosome assembly. (259 aa)
DMC1BMeiotic recombination protein DMC1 homolog B; Recombinase that may participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks (By similarity). Exhibits DNA-dependent ATPase activity when bound to single-stranded DNA (ssDNA). Mediates renaturation of homologous complementary strands as well as assimilation of single strands into homologous supercoiled duplexes leading to D-loop formation (By similarity). Binds circular single-stranded DNA (ssDNA) and circular double-stranded DNA (dsDNA) in vi [...] (344 aa)
Q7EZT4_ORYSJcDNA clone:J013012F23, full insert sequence. (146 aa)
FAS2Chromatin assembly factor 1 subunit FAS2 homolog; Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including apical meristem maintenance by regulating the durations of the S- and G2- phases of the cell cycle through its chromatin assembly activity (By similarity). (505 aa)
RPA1AReplication protein A 70 kDa DNA-binding subunit A; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Plays an essential role in meiotic and somatic DNA repair, but is dispensable for DNA replication and homologous recombination. Is essential for normal progression through meiosis in pollen mother cells. Is involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (656 aa)
XRCC3Os02g0562100 protein. (290 aa)
RIX4cDNA clone:J033032L24, full insert sequence. (728 aa)
MCM5DNA replication licensing factor MCM5; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (729 aa)
RPA2AReplication protein A 32 kDa subunit A; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity). (279 aa)
Q6I632_ORYSJcDNA clone:J033138P03, full insert sequence. (188 aa)
RPA2BReplication protein A 32 kDa subunit B; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity). (298 aa)
Q6H792_ORYSJOs02g0527100 protein. (810 aa)
OJ1384_A02.2DNA replication licensing factor MCM6; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (830 aa)
Q6EPR6_ORYSJSerine/threonine-protein phosphatase. (307 aa)
Q6AUG5_ORYSJcDNA clone:J033106F17, full insert sequence. (127 aa)
MCM9Probable DNA helicase MCM9; Probable DNA helicase that may play a role in DNA repair during meiosis. (674 aa)
B1342F01.10NAP1-related protein 2; Acts as histone H2A/H2B chaperone in nucleosome assembly. (252 aa)
RPA1CReplication protein A 70 kDa DNA-binding subunit C; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (By similarity). (951 aa)
Q60F40_ORYSJcDNA clone:002-105-H03, full insert sequence. (363 aa)
RPA2CReplication protein A 32 kDa subunit C; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity). (430 aa)
Q5WN04_ORYSJOs05g0150600 protein. (844 aa)
NAP1;1Nucleosome assembly protein 1;1; May modulate chromatin structure by regulation of nucleosome assembly/disassembly. (378 aa)
Q5N861_ORYSJOs01g0897800 protein. (1055 aa)
Q5KQG5_ORYSJcDNA clone:J023078H05, full insert sequence. (1065 aa)
MCM4DNA replication licensing factor MCM4; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (862 aa)
NAP1;2Nucleosome assembly protein 1;2; May modulate chromatin structure by regulation of nucleosome assembly/disassembly. (364 aa)
Q337B1_ORYSJDNA excision repair protein ERCC-1, putative, expressed. (387 aa)
Q2RB27_ORYSJcDNA clone:J033089K18, full insert sequence. (604 aa)
Q2RB11_ORYSJNse1 non-SMC component of SMC5-6 complex family protein, expressed. (338 aa)
MCM2DNA replication licensing factor MCM2; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. Can complement the fission yeast mcm2 mutant. (961 aa)
Q2QZT4_ORYSJATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (588 aa)
Q2QYC3_ORYSJCDC45-like protein, expressed. (604 aa)
Q2QX93_ORYSJWD repeat domain 48, putative, expressed. (752 aa)
MCM7DNA replication licensing factor MCM7; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (725 aa)
Q10T60_ORYSJOs03g0100300 protein. (331 aa)
Q10T59_ORYSJcDNA clone:J013151H20, full insert sequence. (995 aa)
RPA1BReplication protein A 70 kDa DNA-binding subunit B; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (By similarity). (630 aa)
Q0JQF9_ORYSJOs01g0164800 protein. (253 aa)
Q0JQF8_ORYSJOs01g0164900 protein. (482 aa)
Q0JNQ2_ORYSJcDNA, clone: J100075O07, full insert sequence. (76 aa)
Q0IVM6_ORYSJOs10g0563500 protein. (799 aa)
Q0IQ60_ORYSJOs12g0143300 protein. (112 aa)
Q0DIM8_ORYSJcDNA clone:J013159E18, full insert sequence. (326 aa)
MCM3DNA replication licensing factor MCM3; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. (770 aa)
Q0DGU0_ORYSJOs05g0512000 protein. (987 aa)
Q0D3Q0_ORYSJOs07g0673600 protein. (195 aa)
B9GBN5_ORYSJOs12g0127100 protein. (336 aa)
B9FU48_ORYSJOs06g0613400 protein. (573 aa)
OsJ_21957Nucleosome assembly protein 1-like 4; May modulate chromatin structure by regulation of nucleosome assembly/disassembly. (312 aa)
B9FFT7_ORYSJOs04g0486800 protein. (926 aa)
B7F8Z9_ORYSJcDNA, clone: J065201C14, full insert sequence. (326 aa)
B7EZI6_ORYSJcDNA clone:002-113-D11, full insert sequence. (119 aa)
RAD54DNA repair and recombination protein RAD54; Involved in DNA repair and mitotic recombination. (980 aa)
NAP1;3Nucleosome assembly protein 1;3; May modulate chromatin structure by regulation of nucleosome assembly/disassembly. (301 aa)
A0A0P0Y3Q2Os11g0572900 protein. (161 aa)
A0A0P0Y3J4Os11g0577300 protein. (156 aa)
A0A0P0Y3J1Os11g0577350 protein. (84 aa)
A0A0P0Y3H7Os11g0577200 protein. (491 aa)
A0A0P0XZP0Os11g0180600 protein. (490 aa)
A0A0P0XYY7Os11g0146550 protein. (204 aa)
A0A0P0XXA1Os10g0563550 protein. (119 aa)
A0A0P0XV57Os10g0466100 protein. (234 aa)
A0A0P0XQ11Os09g0512800 protein. (186 aa)
A0A0P0XJA8Os09g0121050 protein. (554 aa)
A0A0P0X3J1Os07g0209401 protein. (224 aa)
A0A0P0X1V3Sister chromatid cohesion protein. (919 aa)
A0A0P0WMG8Os05g0422900 protein. (46 aa)
A0A0P0WHT3DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (220 aa)
A0A0P0WGZ9Os05g0110950 protein. (212 aa)
A0A0P0WAF3Os04g0433800 protein. (1210 aa)
A0A0P0VQJ4Os02g0780800 protein. (322 aa)
A0A0P0VQF0Os02g0784100 protein. (244 aa)
A0A0P0VQB6Os02g0782800 protein. (480 aa)
A0A0P0V4Q8Os01g0593000 protein. (287 aa)
A0A0N7KTF0Os11g0708600 protein. (98 aa)
A0A0N7KN59Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (482 aa)
A0A0N7KKD8Os05g0235600 protein; Belongs to the nucleosome assembly protein (NAP) family. (125 aa)
A0A0N7KD76Os01g0578700 protein. (257 aa)
RAD51DOs09g0104200 protein. (283 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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