STRINGSTRING
A0A0P0VEK6 A0A0P0VEK6 A0A0P0VEP5 A0A0P0VEP5 A0A0P0VIZ4 A0A0P0VIZ4 A0A0P0WB93 A0A0P0WB93 A0A0P0WTW6 A0A0P0WTW6 A0A0P0XR38 A0A0P0XR38 A0A0P0Y2V6 A0A0P0Y2V6 Q0E3Z8_ORYSJ Q0E3Z8_ORYSJ OsJ_01120 OsJ_01120 Q10M15_ORYSJ Q10M15_ORYSJ Q10PA9_ORYSJ Q10PA9_ORYSJ Q69IN4_ORYSJ Q69IN4_ORYSJ Q6K7Q7_ORYSJ Q6K7Q7_ORYSJ Q6YTY0_ORYSJ Q6YTY0_ORYSJ Q6YU78_ORYSJ Q6YU78_ORYSJ Q6YY16_ORYSJ Q6YY16_ORYSJ Q6ZHR8_ORYSJ Q6ZHR8_ORYSJ Q75K32_ORYSJ Q75K32_ORYSJ Q7XDP6_ORYSJ Q7XDP6_ORYSJ Q7XM14_ORYSJ Q7XM14_ORYSJ Q7XM15_ORYSJ Q7XM15_ORYSJ Q7XZG6_ORYSJ Q7XZG6_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0VEK6Os02g0142300 protein. (128 aa)
A0A0P0VEP5Os02g0147300 protein. (185 aa)
A0A0P0VIZ4Os02g0478900 protein. (927 aa)
A0A0P0WB93Os04g0470150 protein. (76 aa)
A0A0P0WTW6Os06g0214550 protein. (222 aa)
A0A0P0XR38Os09g0549500 protein. (276 aa)
A0A0P0Y2V6Os11g0495400 protein. (131 aa)
Q0E3Z8_ORYSJOs02g0146400 protein. (358 aa)
OsJ_01120Zinc finger CCCH domain-containing protein 3. (167 aa)
Q10M15_ORYSJRNA recognition motif family protein, expressed. (467 aa)
Q10PA9_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
Q69IN4_ORYSJcDNA clone:J013129L11, full insert sequence. (375 aa)
Q6K7Q7_ORYSJOs02g0827300 protein. (582 aa)
Q6YTY0_ORYSJSmall nuclear ribonucleoprotein G. (80 aa)
Q6YU78_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
Q6YY16_ORYSJSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
Q6ZHR8_ORYSJcDNA clone:J033079N13, full insert sequence. (324 aa)
Q75K32_ORYSJSmall nuclear ribonucleoprotein G. (80 aa)
Q7XDP6_ORYSJSplicing factor 3B subunit 4, putative, expressed. (355 aa)
Q7XM14_ORYSJOs04g0663500 protein. (187 aa)
Q7XM15_ORYSJcDNA, clone: J075162F09, full insert sequence. (110 aa)
Q7XZG6_ORYSJPre-mRNA branch site p14, putative, expressed. (130 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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