STRINGSTRING
ATG4A ATG4A A0A0N7KG92 A0A0N7KG92 A0A0N7KI63 A0A0N7KI63 A0A0P0UYY1 A0A0P0UYY1 A0A0P0UZE9 A0A0P0UZE9 A0A0P0V6N0 A0A0P0V6N0 ATG8C ATG8C Q6UUD9_ORYSJ Q6UUD9_ORYSJ Q6K9M2_ORYSJ Q6K9M2_ORYSJ Q6K884_ORYSJ Q6K884_ORYSJ Q6K700_ORYSJ Q6K700_ORYSJ ATG8E ATG8E Q6H657_ORYSJ Q6H657_ORYSJ Q6ETK7_ORYSJ Q6ETK7_ORYSJ ATG8A ATG8A ATG12 ATG12 Q67V39_ORYSJ Q67V39_ORYSJ Q60DN7_ORYSJ Q60DN7_ORYSJ Q5ZDX5_ORYSJ Q5ZDX5_ORYSJ Q5VQF8_ORYSJ Q5VQF8_ORYSJ Q5KQK1_ORYSJ Q5KQK1_ORYSJ Q5JKW7_ORYSJ Q5JKW7_ORYSJ ATG8D ATG8D Q10SI6_ORYSJ Q10SI6_ORYSJ Q10RP0_ORYSJ Q10RP0_ORYSJ Q10P42_ORYSJ Q10P42_ORYSJ Q10NU3_ORYSJ Q10NU3_ORYSJ Q10NJ0_ORYSJ Q10NJ0_ORYSJ Q10L89_ORYSJ Q10L89_ORYSJ Q10DX1_ORYSJ Q10DX1_ORYSJ Q10CZ9_ORYSJ Q10CZ9_ORYSJ Q10A37_ORYSJ Q10A37_ORYSJ Q0JKD4_ORYSJ Q0JKD4_ORYSJ Q0JCK5_ORYSJ Q0JCK5_ORYSJ Q0JBE1_ORYSJ Q0JBE1_ORYSJ Q0J2U9_ORYSJ Q0J2U9_ORYSJ Q0INI1_ORYSJ Q0INI1_ORYSJ Q0DNR9_ORYSJ Q0DNR9_ORYSJ Q0DKE9_ORYSJ Q0DKE9_ORYSJ Q0DIK0_ORYSJ Q0DIK0_ORYSJ Q0DI99_ORYSJ Q0DI99_ORYSJ B9FEW5_ORYSJ B9FEW5_ORYSJ B7F927_ORYSJ B7F927_ORYSJ B7EPF6_ORYSJ B7EPF6_ORYSJ B7E390_ORYSJ B7E390_ORYSJ A2ZYJ2_ORYSJ A2ZYJ2_ORYSJ A0A0P0Y9L9 A0A0P0Y9L9 A0A0P0XZM3 A0A0P0XZM3 A0A0P0XXB4 A0A0P0XXB4 A0A0P0XMB6 A0A0P0XMB6 A0A0P0XM03 A0A0P0XM03 A0A0P0XFK3 A0A0P0XFK3 A0A0P0X4Z7 A0A0P0X4Z7 A0A0P0WUW1 A0A0P0WUW1 A0A0P0WRX8 A0A0P0WRX8 A0A0P0WGL8 A0A0P0WGL8 A0A0P0WAB6 A0A0P0WAB6 A0A0P0VHB7 A0A0P0VHB7 A0A0P0VHA1 A0A0P0VHA1 A0A0P0VDY2 A0A0P0VDY2 Q8LRF5_ORYSJ Q8LRF5_ORYSJ Q8LR61_ORYSJ Q8LR61_ORYSJ Q84LH5_ORYSJ Q84LH5_ORYSJ Q7XX94_ORYSJ Q7XX94_ORYSJ Q7XS62_ORYSJ Q7XS62_ORYSJ ATG4B ATG4B ATG8B ATG8B Q7XK43_ORYSJ Q7XK43_ORYSJ Q75M25_ORYSJ Q75M25_ORYSJ Q6ZH84_ORYSJ Q6ZH84_ORYSJ ATG5 ATG5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATG4ACysteine protease ATG4A; Cysteine protease required for autophagy, which is able to cleave the C-terminal part of ATG8 that may be subsequently converted to a smaller form, with a revealed C-terminal glycine. The C-terminal glycine of ATG8 is conjugated to phosphatidylethanolamine by an amide bond. This conjugated form has the capacity for the binding to autophagosomes (By similarity). (474 aa)
A0A0N7KG92Os02g0796700 protein. (496 aa)
A0A0N7KI63Os03g0786900 protein. (1265 aa)
A0A0P0UYY1Os01g0182832 protein. (654 aa)
A0A0P0UZE9Os01g0182900 protein. (325 aa)
A0A0P0V6N0Os01g0683600 protein. (79 aa)
ATG8CAutophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (120 aa)
Q6UUD9_ORYSJOs08g0307400 protein; Belongs to the PI3/PI4-kinase family. (827 aa)
Q6K9M2_ORYSJcDNA clone:J013074J03, full insert sequence. (374 aa)
Q6K884_ORYSJOs02g0290300 protein. (786 aa)
Q6K700_ORYSJcDNA clone:J023080K14, full insert sequence. (291 aa)
ATG8EPutative autophagy-related protein 8E; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (87 aa)
Q6H657_ORYSJOs02g0644500 protein. (544 aa)
Q6ETK7_ORYSJOs02g0179800 protein. (1140 aa)
ATG8AAutophagy-related protein 8A; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (119 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. Conjugation with ATG5 through a ubiquitin-like conjugating system is essential for its function. ATG12/ATG5 conjugate has an essential role in plant nutrient recycling (By similarity); Belongs to the ATG12 family. (93 aa)
Q67V39_ORYSJOs06g0634600 protein. (451 aa)
Q60DN7_ORYSJcDNA clone:J013066O06, full insert sequence. (501 aa)
Q5ZDX5_ORYSJOs01g0614900 protein. (1042 aa)
Q5VQF8_ORYSJcDNA clone:J023134M09, full insert sequence. (417 aa)
Q5KQK1_ORYSJOs05g0180600 protein; Belongs to the PI3/PI4-kinase family. (814 aa)
Q5JKW7_ORYSJMitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. (163 aa)
ATG8DAutophagy-related protein 8D; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (118 aa)
Q10SI6_ORYSJProtein kinase domain containing protein, expressed. (652 aa)
Q10RP0_ORYSJCell division cycle protein 48, putative, expressed. (809 aa)
Q10P42_ORYSJAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (902 aa)
Q10NU3_ORYSJAutophagy protein Apg6 containing protein, expressed. (543 aa)
Q10NJ0_ORYSJProtein kinase domain containing protein, expressed. (714 aa)
Q10L89_ORYSJMitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. (173 aa)
Q10DX1_ORYSJOs03g0715500 protein. (984 aa)
Q10CZ9_ORYSJTransducin family protein, putative, expressed. (511 aa)
Q10A37_ORYSJAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (927 aa)
Q0JKD4_ORYSJOs01g0681400 protein. (500 aa)
Q0JCK5_ORYSJOs04g0464500 protein. (311 aa)
Q0JBE1_ORYSJcDNA clone:J023108N03, full insert sequence. (520 aa)
Q0J2U9_ORYSJcDNA clone:J023149F04, full insert sequence. (799 aa)
Q0INI1_ORYSJOs12g0446700 protein. (189 aa)
Q0DNR9_ORYSJOs03g0737800 protein. (759 aa)
Q0DKE9_ORYSJOs05g0169200 protein. (382 aa)
Q0DIK0_ORYSJMitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. (164 aa)
Q0DI99_ORYSJcDNA clone:J023003F07, full insert sequence. (1006 aa)
B9FEW5_ORYSJOs04g0389901 protein. (231 aa)
B7F927_ORYSJcDNA, clone: J065213B04, full insert sequence. (198 aa)
B7EPF6_ORYSJcDNA clone:J013072A20, full insert sequence. (110 aa)
B7E390_ORYSJcDNA clone:001-008-E02, full insert sequence; Belongs to the AAA ATPase family. (195 aa)
A2ZYJ2_ORYSJcDNA clone:J033069O17, full insert sequence. (870 aa)
A0A0P0Y9L9Os12g0428200 protein. (260 aa)
A0A0P0XZM3Os11g0162000 protein. (656 aa)
A0A0P0XXB4Autophagy-related protein 3. (292 aa)
A0A0P0XMB6Os09g0407950 protein. (993 aa)
A0A0P0XM03Os09g0408000 protein. (486 aa)
A0A0P0XFK3Os08g0413000 protein. (904 aa)
A0A0P0X4Z7Os07g0418200 protein. (293 aa)
A0A0P0WUW1Os06g0267600 protein. (383 aa)
A0A0P0WRX8Os06g0105600 protein. (605 aa)
A0A0P0WGL8Os04g0686600 protein. (155 aa)
A0A0P0WAB6Os04g0433200 protein. (150 aa)
A0A0P0VHB7Os02g0259900 protein. (443 aa)
A0A0P0VHA1Os02g0259850 protein. (251 aa)
A0A0P0VDY2Os02g0105100 protein. (840 aa)
Q8LRF5_ORYSJAutophagy-related protein 3. (316 aa)
Q8LR61_ORYSJcDNA clone:001-029-C10, full insert sequence. (457 aa)
Q84LH5_ORYSJAlkaline phytoceramidase family protein, expressed. (257 aa)
Q7XX94_ORYSJVacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic. (949 aa)
Q7XS62_ORYSJcDNA clone:006-307-G01, full insert sequence. (258 aa)
ATG4BCysteine protease ATG4B; Cysteine protease required for autophagy, which is able to cleave the C-terminal part of ATG8 that may be subsequently converted to a smaller form, with a revealed C-terminal glycine. The C-terminal glycine of ATG8 is conjugated to phosphatidylethanolamine by an amide bond. This conjugated form has the capacity for the binding to autophagosomes (By similarity); Belongs to the peptidase C54 family. (478 aa)
ATG8BAutophagy-related protein 8B; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (119 aa)
Q7XK43_ORYSJOs04g0476800 protein. (881 aa)
Q75M25_ORYSJOs05g0104100 protein. (936 aa)
Q6ZH84_ORYSJcDNA clone:J013072E12, full insert sequence. (845 aa)
ATG5Autophagy protein 5; Required for autophagy. Conjugation to ATG12 is essential for plant nutrient recycling (By similarity); Belongs to the ATG5 family. (380 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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