STRINGSTRING
Q2QWN0_ORYSJ Q2QWN0_ORYSJ OsJ_32023 OsJ_32023 WDR12 WDR12 Q8H478_ORYSJ Q8H478_ORYSJ Q8H458_ORYSJ Q8H458_ORYSJ EIF6-2 EIF6-2 PES PES Q84RU7_ORYSJ Q84RU7_ORYSJ Q7XPU3_ORYSJ Q7XPU3_ORYSJ Q7XIT8_ORYSJ Q7XIT8_ORYSJ Q5Z8K9_ORYSJ Q5Z8K9_ORYSJ EIF6 EIF6 Q53LZ3_ORYSJ Q53LZ3_ORYSJ Q2RBN3_ORYSJ Q2RBN3_ORYSJ Q2QXB4_ORYSJ Q2QXB4_ORYSJ Q10LL9_ORYSJ Q10LL9_ORYSJ Q10CG9_ORYSJ Q10CG9_ORYSJ Q10BD5_ORYSJ Q10BD5_ORYSJ Q10AN5_ORYSJ Q10AN5_ORYSJ Q0J9E4_ORYSJ Q0J9E4_ORYSJ Q0DN06_ORYSJ Q0DN06_ORYSJ Q0DFV9_ORYSJ Q0DFV9_ORYSJ Q0DES6_ORYSJ Q0DES6_ORYSJ BOP1 BOP1 Q0D674_ORYSJ Q0D674_ORYSJ B9ETA5_ORYSJ B9ETA5_ORYSJ A0A0P0Y6T4 A0A0P0Y6T4 A0A0P0Y5W0 A0A0P0Y5W0 A0A0P0XZ57 A0A0P0XZ57 A0A0P0XVF3 A0A0P0XVF3 A0A0P0XVA4 A0A0P0XVA4 A0A0P0XMV1 A0A0P0XMV1 A0A0P0X4Q8 A0A0P0X4Q8 A0A0P0X0A8 A0A0P0X0A8 TP1 TP1 A0A0P0WS34 A0A0P0WS34 A0A0P0W3Q1 A0A0P0W3Q1 A0A0P0VS29 A0A0P0VS29
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q2QWN0_ORYSJcDNA clone:J013050F15, full insert sequence. (595 aa)
OsJ_32023Nucleolar complex protein 2 homolog. (757 aa)
WDR12Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (436 aa)
Q8H478_ORYSJ60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
Q8H458_ORYSJOs07g0673100 protein. (259 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
PESPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (604 aa)
Q84RU7_ORYSJcDNA clone:J023075L15, full insert sequence. (291 aa)
Q7XPU3_ORYSJRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (330 aa)
Q7XIT8_ORYSJProtein MAK16 homolog; Belongs to the MAK16 family. (290 aa)
Q5Z8K9_ORYSJcDNA clone:J033121H12, full insert sequence. (399 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
Q53LZ3_ORYSJTransposon protein, putative, unclassified, expressed. (310 aa)
Q2RBN3_ORYSJRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (233 aa)
Q2QXB4_ORYSJcDNA clone:J023054G20, full insert sequence. (669 aa)
Q10LL9_ORYSJcDNA clone:001-025-A01, full insert sequence. (360 aa)
Q10CG9_ORYSJOs03g0783450 protein. (142 aa)
Q10BD5_ORYSJFtsJ-like methyltransferase family protein, putative, expressed. (233 aa)
Q10AN5_ORYSJOs03g0846400 protein. (610 aa)
Q0J9E4_ORYSJOs04g0658600 protein. (550 aa)
Q0DN06_ORYSJOs03g0783100 protein. (235 aa)
Q0DFV9_ORYSJPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (819 aa)
Q0DES6_ORYSJcDNA clone:J023145C13, full insert sequence. (392 aa)
BOP1Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (678 aa)
Q0D674_ORYSJcDNA clone:J033071L22, full insert sequence. (295 aa)
B9ETA5_ORYSJOs01g0776500 protein. (369 aa)
A0A0P0Y6T4Os12g0141600 protein. (629 aa)
A0A0P0Y5W0Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (240 aa)
A0A0P0XZ57Os11g0147200 protein. (565 aa)
A0A0P0XVF3Os10g0456950 protein. (323 aa)
A0A0P0XVA4Os10g0456900 protein. (544 aa)
A0A0P0XMV1Os09g0445100 protein. (134 aa)
A0A0P0X4Q8Os07g0271600 protein. (195 aa)
A0A0P0X0A8Os06g0693600 protein. (139 aa)
TP1Trypsin-like peptidase 1. (243 aa)
A0A0P0WS34Os06g0142050 protein. (168 aa)
A0A0P0W3Q1Os03g0776300 protein. (705 aa)
A0A0P0VS29Os03g0109900 protein. (542 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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