STRINGSTRING
A0A0P0V5Y0 A0A0P0V5Y0 A0A0P0W2Z7 A0A0P0W2Z7 A0A0P0X9L6 A0A0P0X9L6 A0A0P0XHE6 A0A0P0XHE6 A0A0P0XN27 A0A0P0XN27 OsDDM1a OsDDM1a Q2QVM6_ORYSJ Q2QVM6_ORYSJ Q53K25_ORYSJ Q53K25_ORYSJ Q5WN02_ORYSJ Q5WN02_ORYSJ Q5ZE12_ORYSJ Q5ZE12_ORYSJ Q6Z978_ORYSJ Q6Z978_ORYSJ OJ1365_D05.1 OJ1365_D05.1 Q84NP5_ORYSJ Q84NP5_ORYSJ OJ1607A12.10 OJ1607A12.10 OsJ_31536 OsJ_31536
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0V5Y0Os01g0645775 protein. (108 aa)
A0A0P0W2Z7Os03g0722400 protein. (139 aa)
A0A0P0X9L6Os07g0646000 protein. (187 aa)
A0A0P0XHE6Os08g0502000 protein. (746 aa)
A0A0P0XN27Os09g0455400 protein. (75 aa)
OsDDM1aChromatin remodeling factor DDM1a. (845 aa)
Q2QVM6_ORYSJHydroxyproline-rich glycoprotein family protein, putative, expressed. (345 aa)
Q53K25_ORYSJcDNA clone:006-202-F11, full insert sequence. (382 aa)
Q5WN02_ORYSJcDNA clone:J033131D02, full insert sequence. (292 aa)
Q5ZE12_ORYSJcDNA clone:J033089K24, full insert sequence. (501 aa)
Q6Z978_ORYSJOs08g0337300 protein. (657 aa)
OJ1365_D05.1Probable histone H2A variant 3; Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone cod [...] (137 aa)
Q84NP5_ORYSJOs07g0693650 protein. (744 aa)
OJ1607A12.10Probable histone H2A variant 1; Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone cod [...] (138 aa)
OsJ_31536Probable histone H2A variant 2; Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone cod [...] (139 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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