STRINGSTRING
Q338P4_ORYSJ Q338P4_ORYSJ H2A7_ORYSJ H2A7_ORYSJ Q651B4_ORYSJ Q651B4_ORYSJ Q6ENK6_ORYSJ Q6ENK6_ORYSJ CenH3 CenH3 Q6YTQ8_ORYSJ Q6YTQ8_ORYSJ Q6ZI97_ORYSJ Q6ZI97_ORYSJ OJ1582_D10.25 OJ1582_D10.25 Q75L16_ORYSJ Q75L16_ORYSJ Q7XUC9_ORYSJ Q7XUC9_ORYSJ OJ1365_D05.1 OJ1365_D05.1 OJ1607A12.10 OJ1607A12.10 OsJ_31536 OsJ_31536 H2B.6 H2B.6 A0A0P0VP17 A0A0P0VP17 A0A0P0VT87 A0A0P0VT87 A0A0P0WNF9 A0A0P0WNF9 A0A0P0XE40 A0A0P0XE40 A0A0P0XPW5 A0A0P0XPW5 A0A0P0XRT5 A0A0P0XRT5 H2B1 H2B1 Q10QT4_ORYSJ Q10QT4_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q338P4_ORYSJcDNA clone:J013055E03, full insert sequence. (195 aa)
H2A7_ORYSJProbable histone H2A.7; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (135 aa)
Q651B4_ORYSJcDNA clone:J023088I05, full insert sequence. (427 aa)
Q6ENK6_ORYSJcDNA clone:001-116-G05, full insert sequence. (440 aa)
CenH3Centromeric histone 3. (164 aa)
Q6YTQ8_ORYSJOs08g0333100 protein. (481 aa)
Q6ZI97_ORYSJOs08g0530500 protein. (207 aa)
OJ1582_D10.25Probable histone H2A.1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (135 aa)
Q75L16_ORYSJcDNA clone:J013095H10, full insert sequence. (458 aa)
Q7XUC9_ORYSJHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
OJ1365_D05.1Probable histone H2A variant 3; Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone cod [...] (137 aa)
OJ1607A12.10Probable histone H2A variant 1; Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone cod [...] (138 aa)
OsJ_31536Probable histone H2A variant 2; Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone cod [...] (139 aa)
H2B.6Histone H2B.6; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (153 aa)
A0A0P0VP17Os02g0717600 protein. (544 aa)
A0A0P0VT87Os03g0144700 protein; Belongs to the histone H2A family. (377 aa)
A0A0P0WNF9Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
A0A0P0XE40Os08g0264400 protein. (76 aa)
A0A0P0XPW5Os09g0488700 protein. (348 aa)
A0A0P0XRT5Os09g0570850 protein; Belongs to the histone H2B family. (152 aa)
H2B1Histone H2B.1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (152 aa)
Q10QT4_ORYSJcDNA clone:J013106B15, full insert sequence. (212 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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