STRINGSTRING
Q0DL70_ORYSJ Q0DL70_ORYSJ Q0DHS5_ORYSJ Q0DHS5_ORYSJ BD31C_ORYSJ BD31C_ORYSJ C7J4B5_ORYSJ C7J4B5_ORYSJ B7F7E9_ORYSJ B7F7E9_ORYSJ A3AYP1_ORYSJ A3AYP1_ORYSJ A0A0P0Y2V6 A0A0P0Y2V6 A0A0P0Y041 A0A0P0Y041 A0A0P0XZM9 A0A0P0XZM9 A0A0P0XXX9 A0A0P0XXX9 A0A0N7KG47 A0A0N7KG47 A0A0N7KHW2 A0A0N7KHW2 A0A0P0VD95 A0A0P0VD95 A0A0P0VEK6 A0A0P0VEK6 A0A0P0VEP5 A0A0P0VEP5 A0A0P0VFD5 A0A0P0VFD5 A0A0P0VIZ4 A0A0P0VIZ4 A0A0P0VKD9 A0A0P0VKD9 A0A0P0VQ25 A0A0P0VQ25 A0A0P0VST4 A0A0P0VST4 A0A0P0VZZ4 A0A0P0VZZ4 A0A0P0W340 A0A0P0W340 A0A0P0W398 A0A0P0W398 A0A0P0W439 A0A0P0W439 A0A0P0W608 A0A0P0W608 A0A0P0W9E9 A0A0P0W9E9 A0A0P0WCC4 A0A0P0WCC4 A0A0P0WCH8 A0A0P0WCH8 A0A0P0WCK8 A0A0P0WCK8 A0A0P0WCQ7 A0A0P0WCQ7 A0A0P0WEX6 A0A0P0WEX6 A0A0P0WFJ0 A0A0P0WFJ0 A0A0P0WFJ2 A0A0P0WFJ2 A0A0P0WMP2 A0A0P0WMP2 A0A0P0WTW6 A0A0P0WTW6 A0A0P0WU10 A0A0P0WU10 A0A0P0WWK8 A0A0P0WWK8 A0A0P0XE29 A0A0P0XE29 A0A0P0XEK8 A0A0P0XEK8 A0A0P0XR38 A0A0P0XR38 Q65WS9_ORYSJ Q65WS9_ORYSJ OsJ_18724 OsJ_18724 Q67V88_ORYSJ Q67V88_ORYSJ Q67WC9_ORYSJ Q67WC9_ORYSJ Q69K06_ORYSJ Q69K06_ORYSJ OJ1001_G09.14 OJ1001_G09.14 Q69V60_ORYSJ Q69V60_ORYSJ Q6AT05_ORYSJ Q6AT05_ORYSJ Q6AVF4_ORYSJ Q6AVF4_ORYSJ Q6ESY0_ORYSJ Q6ESY0_ORYSJ Q6ET26_ORYSJ Q6ET26_ORYSJ Q6ETX3_ORYSJ Q6ETX3_ORYSJ Q6EUD5_ORYSJ Q6EUD5_ORYSJ C3H15_ORYSJ C3H15_ORYSJ Q6K5F4_ORYSJ Q6K5F4_ORYSJ Q6K7Q7_ORYSJ Q6K7Q7_ORYSJ Q6K975_ORYSJ Q6K975_ORYSJ Q6KAB7_ORYSJ Q6KAB7_ORYSJ Q6L5D9_ORYSJ Q6L5D9_ORYSJ Q6YTU8_ORYSJ Q6YTU8_ORYSJ Q6YU78_ORYSJ Q6YU78_ORYSJ OsJ_23846 OsJ_23846 Q6Z6T3_ORYSJ Q6Z6T3_ORYSJ Q6Z725_ORYSJ Q6Z725_ORYSJ Q6Z8Q6_ORYSJ Q6Z8Q6_ORYSJ Q6ZCC0_ORYSJ Q6ZCC0_ORYSJ Q6ZDR7_ORYSJ Q6ZDR7_ORYSJ OJ1163_G08.29 OJ1163_G08.29 Q6ZKL9_ORYSJ Q6ZKL9_ORYSJ P0587F01.11 P0587F01.11 Q75IR8_ORYSJ Q75IR8_ORYSJ Q7EYN1_ORYSJ Q7EYN1_ORYSJ DIM1 DIM1 Q7XDP6_ORYSJ Q7XDP6_ORYSJ Q7XM14_ORYSJ Q7XM14_ORYSJ Q7XM15_ORYSJ Q7XM15_ORYSJ Q7XQI1_ORYSJ Q7XQI1_ORYSJ Q7XRX7_ORYSJ Q7XRX7_ORYSJ Q7XTJ6_ORYSJ Q7XTJ6_ORYSJ Q7XZG6_ORYSJ Q7XZG6_ORYSJ Q84MU4_ORYSJ Q84MU4_ORYSJ Q84T85_ORYSJ Q84T85_ORYSJ Q8LHL0_ORYSJ Q8LHL0_ORYSJ Q8LIB1_ORYSJ Q8LIB1_ORYSJ Q8LLN5_ORYSJ Q8LLN5_ORYSJ Q8RZK0_ORYSJ Q8RZK0_ORYSJ Q8S5Y7_ORYSJ Q8S5Y7_ORYSJ OsJ_004032 OsJ_004032 PRP19 PRP19 RPA3 RPA3 Q9SNN7_ORYSJ Q9SNN7_ORYSJ A0A0P0XVH2 A0A0P0XVH2 Q656K0_ORYSJ Q656K0_ORYSJ Q654Q5_ORYSJ Q654Q5_ORYSJ Q5ZCD9_ORYSJ Q5ZCD9_ORYSJ Q5ZC77_ORYSJ Q5ZC77_ORYSJ Q5ZBQ4_ORYSJ Q5ZBQ4_ORYSJ Q5Z414_ORYSJ Q5Z414_ORYSJ EIF4A3A EIF4A3A OsJ_019459 OsJ_019459 Q5N910_ORYSJ Q5N910_ORYSJ Q5JJU2_ORYSJ Q5JJU2_ORYSJ Q53KX3_ORYSJ Q53KX3_ORYSJ Q33BE1_ORYSJ Q33BE1_ORYSJ Q2R1J4_ORYSJ Q2R1J4_ORYSJ U2AF65A U2AF65A U2AF65B U2AF65B Q2QM64_ORYSJ Q2QM64_ORYSJ Q10Q44_ORYSJ Q10Q44_ORYSJ Q10PL7_ORYSJ Q10PL7_ORYSJ Q10PA9_ORYSJ Q10PA9_ORYSJ Q10NP6_ORYSJ Q10NP6_ORYSJ Q10N19_ORYSJ Q10N19_ORYSJ Q10M15_ORYSJ Q10M15_ORYSJ EIF4A3B EIF4A3B Q10DW3_ORYSJ Q10DW3_ORYSJ Q10B15_ORYSJ Q10B15_ORYSJ OsJ_01120 OsJ_01120 Q0JLQ1_ORYSJ Q0JLQ1_ORYSJ Q0JLM7_ORYSJ Q0JLM7_ORYSJ Q0JKA7_ORYSJ Q0JKA7_ORYSJ Q0JKA6_ORYSJ Q0JKA6_ORYSJ Q0JFD2_ORYSJ Q0JFD2_ORYSJ Q0J949_ORYSJ Q0J949_ORYSJ Q0E3Z8_ORYSJ Q0E3Z8_ORYSJ Q0DT74_ORYSJ Q0DT74_ORYSJ Q0DNQ5_ORYSJ Q0DNQ5_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q0DL70_ORYSJOs05g0120100 protein. (323 aa)
Q0DHS5_ORYSJOs05g0445800 protein. (715 aa)
BD31C_ORYSJProtein BUD31 homolog 3. (145 aa)
C7J4B5_ORYSJOs06g0523900 protein. (699 aa)
B7F7E9_ORYSJcDNA clone:J033033I04, full insert sequence. (434 aa)
A3AYP1_ORYSJOs04g0679400 protein. (258 aa)
A0A0P0Y2V6Os11g0495400 protein. (131 aa)
A0A0P0Y041Os11g0186600 protein. (216 aa)
A0A0P0XZM9Os11g0196100 protein. (200 aa)
A0A0P0XXX9Os11g0110800 protein. (153 aa)
A0A0N7KG47Os02g0758100 protein. (619 aa)
A0A0N7KHW2Os03g0701100 protein. (318 aa)
A0A0P0VD95Os01g0961300 protein. (151 aa)
A0A0P0VEK6Os02g0142300 protein. (128 aa)
A0A0P0VEP5Os02g0147300 protein. (185 aa)
A0A0P0VFD5Os02g0167500 protein. (957 aa)
A0A0P0VIZ4Os02g0478900 protein. (927 aa)
A0A0P0VKD9COX assembly mitochondrial protein. (89 aa)
A0A0P0VQ25Os02g0749500 protein. (126 aa)
A0A0P0VST4Os03g0138100 protein. (643 aa)
A0A0P0VZZ4Os03g0600400 protein. (54 aa)
A0A0P0W340Os03g0753400 protein. (522 aa)
A0A0P0W398Os03g0755300 protein. (193 aa)
A0A0P0W439Os03g0755450 protein. (115 aa)
A0A0P0W608Os04g0114801 protein. (163 aa)
A0A0P0W9E9Os04g0385700 protein. (359 aa)
A0A0P0WCC4Os04g0512800 protein. (234 aa)
A0A0P0WCH8Os04g0512700 protein. (295 aa)
A0A0P0WCK8Os04g0512750 protein. (265 aa)
A0A0P0WCQ7Os04g0512775 protein. (109 aa)
A0A0P0WEX6Os04g0619900 protein. (351 aa)
A0A0P0WFJ0Os04g0646000 protein. (344 aa)
A0A0P0WFJ2Os04g0646050 protein. (162 aa)
A0A0P0WMP2Os05g0431266 protein. (78 aa)
A0A0P0WTW6Os06g0214550 protein. (222 aa)
A0A0P0WU10Os06g0218900 protein. (276 aa)
A0A0P0WWK8Os06g0335101 protein. (114 aa)
A0A0P0XE29Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
A0A0P0XEK8Os08g0288500 protein. (428 aa)
A0A0P0XR38Os09g0549500 protein. (276 aa)
Q65WS9_ORYSJcDNA clone:J013124C24, full insert sequence. (715 aa)
OsJ_18724Protein BUD31 homolog 2. (145 aa)
Q67V88_ORYSJOs06g0235800 protein. (801 aa)
Q67WC9_ORYSJcDNA clone:006-305-A11, full insert sequence. (343 aa)
Q69K06_ORYSJOs09g0103600 protein. (392 aa)
OJ1001_G09.14Zinc finger CCCH domain-containing protein 59. (613 aa)
Q69V60_ORYSJcDNA clone:J033113H11, full insert sequence. (997 aa)
Q6AT05_ORYSJOs05g0229475 protein. (70 aa)
Q6AVF4_ORYSJArginine/serine-rich splicing factor, putative, expressed. (205 aa)
Q6ESY0_ORYSJOs02g0543300 protein. (1005 aa)
Q6ET26_ORYSJOs02g0280100 protein. (435 aa)
Q6ETX3_ORYSJU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (228 aa)
Q6EUD5_ORYSJOs02g0245000 protein. (792 aa)
C3H15_ORYSJZinc finger CCCH domain-containing protein 15. (326 aa)
Q6K5F4_ORYSJcDNA clone:002-107-H03, full insert sequence. (311 aa)
Q6K7Q7_ORYSJOs02g0827300 protein. (582 aa)
Q6K975_ORYSJOs02g0831300 protein. (516 aa)
Q6KAB7_ORYSJOs02g0294000 protein. (362 aa)
Q6L5D9_ORYSJOs05g0581900 protein. (281 aa)
Q6YTU8_ORYSJcDNA clone:J033051L15, full insert sequence. (438 aa)
Q6YU78_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
OsJ_23846Zinc finger CCCH domain-containing protein 49. (486 aa)
Q6Z6T3_ORYSJOs02g0324300 protein. (310 aa)
Q6Z725_ORYSJcDNA clone:J023126J16, full insert sequence. (279 aa)
Q6Z8Q6_ORYSJSplicing factor subunit; Belongs to the SF3B5 family. (87 aa)
Q6ZCC0_ORYSJOs08g0113200 protein. (838 aa)
Q6ZDR7_ORYSJcDNA clone:001-125-B07, full insert sequence. (289 aa)
OJ1163_G08.29Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. (536 aa)
Q6ZKL9_ORYSJcDNA clone:001-124-H11, full insert sequence. (513 aa)
P0587F01.11cDNA clone:J023095B21, full insert sequence. (723 aa)
Q75IR8_ORYSJcDNA clone:001-116-H05, full insert sequence. (338 aa)
Q7EYN1_ORYSJOs08g0379000 protein. (1161 aa)
DIM1Thioredoxin-like protein 4A, putative, expressed. (142 aa)
Q7XDP6_ORYSJSplicing factor 3B subunit 4, putative, expressed. (355 aa)
Q7XM14_ORYSJOs04g0663500 protein. (187 aa)
Q7XM15_ORYSJcDNA, clone: J075162F09, full insert sequence. (110 aa)
Q7XQI1_ORYSJOs04g0496400 protein. (476 aa)
Q7XRX7_ORYSJcDNA clone:J013170G11, full insert sequence. (502 aa)
Q7XTJ6_ORYSJOs04g0118900 protein. (245 aa)
Q7XZG6_ORYSJPre-mRNA branch site p14, putative, expressed. (130 aa)
Q84MU4_ORYSJPre-mRNA splicing factor PRP17, putative, expressed. (573 aa)
Q84T85_ORYSJOs03g0853700 protein. (955 aa)
Q8LHL0_ORYSJcDNA clone:J023050C05, full insert sequence. (275 aa)
Q8LIB1_ORYSJcDNA clone:J013074K22, full insert sequence. (931 aa)
Q8LLN5_ORYSJcDNA clone:001-013-F09, full insert sequence. (516 aa)
Q8RZK0_ORYSJcDNA clone:001-113-F12, full insert sequence. (279 aa)
Q8S5Y7_ORYSJcDNA clone:J023047D02, full insert sequence. (711 aa)
OsJ_004032Protein BUD31 homolog 1. (145 aa)
PRP19Pre-mRNA-processing factor 19; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair. (527 aa)
RPA3Replication protein A 14 kDa subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (106 aa)
Q9SNN7_ORYSJPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)
A0A0P0XVH2Os10g0483700 protein. (152 aa)
Q656K0_ORYSJcDNA clone:J013149F09, full insert sequence. (504 aa)
Q654Q5_ORYSJOs06g0248400 protein. (767 aa)
Q5ZCD9_ORYSJcDNA clone:006-311-F07, full insert sequence. (324 aa)
Q5ZC77_ORYSJProtein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I). (504 aa)
Q5ZBQ4_ORYSJOs01g0588600 protein. (291 aa)
Q5Z414_ORYSJcDNA clone:J023104M24, full insert sequence. (182 aa)
EIF4A3AEukaryotic initiation factor 4A-III homolog A; ATP-dependent RNA helicase. Core component of the splicing- dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throu [...] (404 aa)
OsJ_019459Zinc finger CCCH domain-containing protein 40. (482 aa)
Q5N910_ORYSJcDNA clone:J013126K03, full insert sequence. (547 aa)
Q5JJU2_ORYSJcDNA clone:J033112L14, full insert sequence. (608 aa)
Q53KX3_ORYSJElongation factor Tu family protein, putative, expressed. (1029 aa)
Q33BE1_ORYSJTransposon protein, putative, CACTA, En/Spm sub-class, expressed. (463 aa)
Q2R1J4_ORYSJPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (235 aa)
U2AF65ASplicing factor U2af large subunit A; Necessary for the splicing of pre-mRNA. (574 aa)
U2AF65BSplicing factor U2af large subunit B; Necessary for the splicing of pre-mRNA. (548 aa)
Q2QM64_ORYSJG-patch domain containing protein, expressed. (844 aa)
Q10Q44_ORYSJPre-mRNA processing protein prp39, putative, expressed. (789 aa)
Q10PL7_ORYSJPoly polymerase catalytic domain containing protein, expressed. (463 aa)
Q10PA9_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
Q10NP6_ORYSJSplicing factor 3A subunit 2, putative, expressed. (321 aa)
Q10N19_ORYSJRNA recognition motif family protein, expressed. (330 aa)
Q10M15_ORYSJRNA recognition motif family protein, expressed. (467 aa)
EIF4A3BEukaryotic initiation factor 4A-III homolog B; ATP-dependent RNA helicase. Core component of the splicing- dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throu [...] (404 aa)
Q10DW3_ORYSJSplicing factor 3A subunit 3, putative, expressed. (507 aa)
Q10B15_ORYSJcDNA clone:002-149-C11, full insert sequence. (574 aa)
OsJ_01120Zinc finger CCCH domain-containing protein 3. (167 aa)
Q0JLQ1_ORYSJOs01g0582400 protein. (499 aa)
Q0JLM7_ORYSJcDNA clone:J013059D18, full insert sequence. (330 aa)
Q0JKA7_ORYSJOs01g0686500 protein. (398 aa)
Q0JKA6_ORYSJOs01g0686600 protein. (396 aa)
Q0JFD2_ORYSJOs04g0115400 protein. (144 aa)
Q0J949_ORYSJPoly [ADP-ribose] polymerase. (959 aa)
Q0E3Z8_ORYSJOs02g0146400 protein. (358 aa)
Q0DT74_ORYSJOs03g0265600 protein. (125 aa)
Q0DNQ5_ORYSJOs03g0740700 protein. (759 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (34%) [HD]