STRINGSTRING
A0A0P0VPC8 A0A0P0VPC8 Q8H4L0_ORYSJ Q8H4L0_ORYSJ Q6YU78_ORYSJ Q6YU78_ORYSJ Q7XU07_ORYSJ Q7XU07_ORYSJ A0A0P0VP35 A0A0P0VP35 Q75K32_ORYSJ Q75K32_ORYSJ Q6Z2M5_ORYSJ Q6Z2M5_ORYSJ Q6YTY0_ORYSJ Q6YTY0_ORYSJ Q10PA9_ORYSJ Q10PA9_ORYSJ Q0J803_ORYSJ Q0J803_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0VPC8Os02g0730100 protein. (147 aa)
Q8H4L0_ORYSJOs07g0141600 protein. (484 aa)
Q6YU78_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
Q7XU07_ORYSJcDNA clone:J013052N06, full insert sequence. (484 aa)
A0A0P0VP35Os02g0730200 protein. (146 aa)
Q75K32_ORYSJSmall nuclear ribonucleoprotein G. (80 aa)
Q6Z2M5_ORYSJSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
Q6YTY0_ORYSJSmall nuclear ribonucleoprotein G. (80 aa)
Q10PA9_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
Q0J803_ORYSJSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (64 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.