STRINGSTRING
C7IXA8_ORYSJ C7IXA8_ORYSJ Q53PI0_ORYSJ Q53PI0_ORYSJ Q5TKK0_ORYSJ Q5TKK0_ORYSJ Q5TKK1_ORYSJ Q5TKK1_ORYSJ Q651Z0_ORYSJ Q651Z0_ORYSJ OJ1003_C09.22 OJ1003_C09.22 Q6ZBP8_ORYSJ Q6ZBP8_ORYSJ Q7XJW3_ORYSJ Q7XJW3_ORYSJ CPSF1_ORYSJ CPSF1_ORYSJ Q84JJ2_ORYSJ Q84JJ2_ORYSJ Q2QX64_ORYSJ Q2QX64_ORYSJ Q2QLR2_ORYSJ Q2QLR2_ORYSJ Q10FE7_ORYSJ Q10FE7_ORYSJ Q0JK62_ORYSJ Q0JK62_ORYSJ Q0DNZ7_ORYSJ Q0DNZ7_ORYSJ B1153E06.24 B1153E06.24 C7IZF7_ORYSJ C7IZF7_ORYSJ A0A0P0X3R7 A0A0P0X3R7 A0A0P0X0C9 A0A0P0X0C9 A0A0P0WUL0 A0A0P0WUL0 A0A0P0WCL3 A0A0P0WCL3 A0A0P0VWK8 A0A0P0VWK8 A0A0P0VG66 A0A0P0VG66 A0A0N7KH51 A0A0N7KH51 A0A0N7KEF1 A0A0N7KEF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C7IXA8_ORYSJOs01g0694400 protein. (104 aa)
Q53PI0_ORYSJRNA recognition motif family protein, expressed. (495 aa)
Q5TKK0_ORYSJOs05g0223500 protein. (102 aa)
Q5TKK1_ORYSJcDNA clone:J023021C02, full insert sequence. (102 aa)
Q651Z0_ORYSJcDNA clone:J013120H23, full insert sequence. (604 aa)
OJ1003_C09.22Cleavage and polyadenylation specificity factor subunit 2; CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. (738 aa)
Q6ZBP8_ORYSJcDNA clone:J013090I22, full insert sequence. (603 aa)
Q7XJW3_ORYSJOs04g0467300 protein. (484 aa)
CPSF1_ORYSJProbable cleavage and polyadenylation specificity factor subunit 1; CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction (By similarity). (1441 aa)
Q84JJ2_ORYSJCleavage and polyadenylation specificity factor, 73 kDa subunit, putative, expressed. (700 aa)
Q2QX64_ORYSJcDNA clone:J023025N02, full insert sequence. (200 aa)
Q2QLR2_ORYSJGlycine-rich RNA-binding protein GRP1A, putative, expressed. (162 aa)
Q10FE7_ORYSJRetrotransposon protein, putative, Ty1-copia subclass, expressed. (196 aa)
Q0JK62_ORYSJOs01g0694300 protein. (141 aa)
Q0DNZ7_ORYSJOs03g0725100 protein. (661 aa)
B1153E06.24Zinc finger CCCH domain-containing protein 45. (665 aa)
C7IZF7_ORYSJOs03g0725050 protein. (285 aa)
A0A0P0X3R7Os07g0221100 protein. (130 aa)
A0A0P0X0C9Os06g0698400 protein. (123 aa)
A0A0P0WUL0Os06g0248200 protein. (164 aa)
A0A0P0WCL3Os04g0516300 protein. (137 aa)
A0A0P0VWK8Os03g0308850 protein. (200 aa)
A0A0P0VG66Os02g0208200 protein. (71 aa)
A0A0N7KH51Os03g0308900 protein. (491 aa)
A0A0N7KEF1Os01g0951000 protein. (186 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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