STRINGSTRING
A0A0P0XEE7 A0A0P0XEE7 A0A0P0WA41 A0A0P0WA41 A0A0P0X4G7 A0A0P0X4G7 Q2R9B1_ORYSJ Q2R9B1_ORYSJ Q651J2_ORYSJ Q651J2_ORYSJ Q6H876_ORYSJ Q6H876_ORYSJ HDAC2 HDAC2 A0A0P0XJP0 A0A0P0XJP0 A0A0P0W9D8 A0A0P0W9D8 A0A0P0VMP6 A0A0P0VMP6 A0A0P0Y523 A0A0P0Y523 A0A0P0XZX1 A0A0P0XZX1 C7IXD7_ORYSJ C7IXD7_ORYSJ Q0D6I0_ORYSJ Q0D6I0_ORYSJ Q0DFI3_ORYSJ Q0DFI3_ORYSJ AGI_ORYSJ AGI_ORYSJ Q94D35_ORYSJ Q94D35_ORYSJ Q8S5G9_ORYSJ Q8S5G9_ORYSJ HDAC1 HDAC1 HDAC3 HDAC3 Q6ZH90_ORYSJ Q6ZH90_ORYSJ A0A0P0W7D2 A0A0P0W7D2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0XEE7Os08g0316050 protein. (107 aa)
A0A0P0WA41Os04g0409600 protein. (188 aa)
A0A0P0X4G7Os07g0264450 protein. (127 aa)
Q2R9B1_ORYSJHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (456 aa)
Q651J2_ORYSJcDNA clone:001-122-C10, full insert sequence. (115 aa)
Q6H876_ORYSJOs02g0635950 protein. (421 aa)
HDAC2Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (509 aa)
A0A0P0XJP0Os09g0105400 protein. (106 aa)
A0A0P0W9D8Os04g0339800 protein. (135 aa)
A0A0P0VMP6Os02g0663550 protein. (91 aa)
A0A0P0Y523Os11g0651632 protein. (127 aa)
A0A0P0XZX1Os11g0201400 protein. (319 aa)
C7IXD7_ORYSJOs01g0109750 protein. (137 aa)
Q0D6I0_ORYSJOs07g0477500 protein. (794 aa)
Q0DFI3_ORYSJOs05g0588700 protein. (858 aa)
AGI_ORYSJLectin 10 kDa peptide; N-acetyl-D-glucosamine binding lectin. (227 aa)
Q94D35_ORYSJHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (481 aa)
Q8S5G9_ORYSJOs10g0374200 protein. (460 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] (518 aa)
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes; Belongs to the histone deacetylase family. HD Type 1 subfamily. (510 aa)
Q6ZH90_ORYSJHistone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (152 aa)
A0A0P0W7D2Os04g0188800 protein. (107 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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