(101 nodes) Cytosolic large ribosomal subunit network (Oryza sativa Japonica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0P0VCB2	Os01g0924800 protein. (158 aa)
	Q2QXN5_ORYSJ	60S ribosomal protein L26-1, putative, expressed. (150 aa)
	Q10LR6_ORYSJ	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (208 aa)
	Q10LN7_ORYSJ	60S ribosomal protein L18, putative, expressed. (187 aa)
	Q0JJZ7_ORYSJ	Os01g0706500 protein. (145 aa)
	Q0JBZ7_ORYSJ	Os04g0501000 protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
	Q0JAI2_ORYSJ	Os04g0598200 protein; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	Q0JAC6_ORYSJ	cDNA clone:J033044G24, full insert sequence. (244 aa)
	Q0J889_ORYSJ	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	Q0J4L7_ORYSJ	Os08g0505300 protein. (66 aa)
	Q0J0Q8_ORYSJ	cDNA clone:J013126M04, full insert sequence. (133 aa)
	Q0E4R7_ORYSJ	cDNA clone:001-104-A12, full insert sequence. (192 aa)
	Q0E2I8_ORYSJ	cDNA clone:J013093C14, full insert sequence; Belongs to the universal ribosomal protein uL5 family. (182 aa)
	Q0DWC5_ORYSJ	Os02g0821200 protein. (92 aa)
	Q0D5Z2_ORYSJ	Os07g0523300 protein; Belongs to the eukaryotic ribosomal protein eL42 family. (95 aa)
	P0596H10.6	60S acidic ribosomal protein P3; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family. (119 aa)
	RPL39B	60S ribosomal protein L39-2; Belongs to the eukaryotic ribosomal protein eL39 family. (51 aa)
	RPL9	60S ribosomal protein L9; Belongs to the universal ribosomal protein uL6 family. (190 aa)
	RPL7A-1	60S ribosomal protein L7a-1; Belongs to the eukaryotic ribosomal protein eL8 family. (258 aa)
	RPL7A-2	60S ribosomal protein L7a-2; Belongs to the eukaryotic ribosomal protein eL8 family. (258 aa)
	OJ1214_E03.13	60S ribosomal protein L37a-2; Belongs to the eukaryotic ribosomal protein eL43 family. (92 aa)
	B1144G04.40-1	60S ribosomal protein L37a-1; Belongs to the eukaryotic ribosomal protein eL43 family. (92 aa)
	B9G4E8_ORYSJ	Os09g0501700 protein. (170 aa)
	B7E905_ORYSJ	cDNA clone:001-121-A02, full insert sequence. (133 aa)
	A3BR69_ORYSJ	Os08g0250300 protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	A0A0P0XW06	Os10g0465800 protein. (85 aa)
	A0A0P0XLP8	Os09g0413500 protein. (62 aa)
	A0A0P0XJU9	Os08g0542100 protein. (275 aa)
	A0A0P0XID1	Os08g0524600 protein. (42 aa)
	A0A0P0XC83	Os08g0162900 protein. (86 aa)
	A0A0P0X9Y2	Os07g0670800 protein. (53 aa)
	A0A0P0X000	Os06g0674800 protein. (448 aa)
	A0A0P0WQT3	Os05g0555800 protein. (112 aa)
	A0A0P0WMY2	Os05g0445500 protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (139 aa)
	A0A0P0WK98	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	A0A0P0VSV2	Os03g0141000 protein. (80 aa)
	A0A0P0VRI0	Os02g0814700 protein; Belongs to the universal ribosomal protein uL14 family. (152 aa)
	A0A0P0VR59	Os02g0815000 protein. (141 aa)
	A0A0P0VQP9	Os02g0796900 protein. (50 aa)
	A0A0P0VDM6	WAT1-related protein. (377 aa)
	Q53Q51_ORYSJ	Os11g0151300 protein. (153 aa)
	A0A0P0VAC8	Os01g0840700 protein. (41 aa)
	A0A0N7KGJ7	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family. (148 aa)
	RPL30	60S ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family. (111 aa)
	Q9LWS2_ORYSJ	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (208 aa)
	Q9LWN1_ORYSJ	cDNA clone:J013120K02, full insert sequence; Belongs to the universal ribosomal protein uL5 family. (182 aa)
	Q9FP55_ORYSJ	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (60 aa)
	Q9AV77_ORYSJ	60S ribosomal protein L23, putative, expressed; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	Q94CM9_ORYSJ	Os01g0348700 protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
	rpl5	Ribosomal protein L5. (188 aa)
	Q8H8S1_ORYSJ	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	Q8H5N0_ORYSJ	cDNA clone:001-121-E03, full insert sequence; Belongs to the eukaryotic ribosomal protein eL42 family. (105 aa)
	Q8H3F5_ORYSJ	Os07g0251301 protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	Q8GVY2_ORYSJ	60S ribosomal protein L38, putative, expressed; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	Q8GSE9_ORYSJ	Os07g0613200 protein; Belongs to the universal ribosomal protein uL15 family. (146 aa)
	P0446G09.102	cDNA clone:J033051L19, full insert sequence. (163 aa)
	Q84NX8_ORYSJ	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (206 aa)
	Q84MQ4_ORYSJ	60S ribosomal protein L27a-3, putative, expressed; Belongs to the universal ribosomal protein uL15 family. (146 aa)
	Q7Y1I5_ORYSJ	Os03g0796501 protein. (404 aa)
	Q7XR19_ORYSJ	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (222 aa)
	Q7XMJ1_ORYSJ	cDNA clone:J013000G06, full insert sequence. (123 aa)
	Q7XJB4_ORYSJ	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (208 aa)
	Q7XC31_ORYSJ	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	Q7X752_ORYSJ	cDNA clone:001-044-H03, full insert sequence. (134 aa)
	bip108	60S ribosomal protein L22-2, putative, expressed. (131 aa)
	Q75J18_ORYSJ	60S ribosomal protein L13a-2, putative, expressed; Belongs to the universal ribosomal protein uL13 family. (206 aa)
	Q6ZLB8_ORYSJ	cDNA clone:001-031-B02, full insert sequence. (405 aa)
	Q6ZIA1_ORYSJ	cDNA clone:001-044-B07, full insert sequence; Belongs to the universal ribosomal protein uL22 family. (171 aa)
	Q6ZFJ6_ORYSJ	WAT1-related protein. (353 aa)
	P0618H09.15	cDNA clone:J013060D13, full insert sequence. (195 aa)
	Q6ZD96_ORYSJ	cDNA clone:J033128K17, full insert sequence. (118 aa)
	Q6Z8Y5_ORYSJ	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	Q6Z8K2_ORYSJ	Os02g0750800 protein. (227 aa)
	Q6Z8E0_ORYSJ	cDNA clone:J033076B01, full insert sequence; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	Q6Z537_ORYSJ	Os08g0436800 protein. (118 aa)
	Q6YYR2_ORYSJ	cDNA clone:J033112B19, full insert sequence. (245 aa)
	Q6YY64_ORYSJ	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (219 aa)
	P0618H09.1	cDNA clone:001-012-A06, full insert sequence. (130 aa)
	Q6L510_ORYSJ	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (113 aa)
	RPL39A	60S ribosomal protein L39-1; Belongs to the eukaryotic ribosomal protein eL39 family. (51 aa)
	Q6K8U8_ORYSJ	cDNA clone:001-122-D08, full insert sequence. (112 aa)
	Q6K667_ORYSJ	cDNA clone:001-025-A09, full insert sequence. (123 aa)
	Q6K4T1_ORYSJ	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (137 aa)
	Q6K1W6_ORYSJ	cDNA clone:001-047-A12, full insert sequence; Belongs to the universal ribosomal protein uL22 family. (171 aa)
	OsRPL14	Ribosomal protein L14. (134 aa)
	Q6I608_ORYSJ	cDNA clone:001-019-B02, full insert sequence. (111 aa)
	Q6H764_ORYSJ	cDNA clone:J023042A15, full insert sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	Q6F331_ORYSJ	cDNA clone:J023042D20, full insert sequence. (112 aa)
	Q6EUQ7_ORYSJ	cDNA clone:J023061G23, full insert sequence; Belongs to the universal ribosomal protein uL15 family. (144 aa)
	Q6AUF5_ORYSJ	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)
	Q5ZDH6_ORYSJ	Os01g0140500 protein. (129 aa)
	Q5Z9Z8_ORYSJ	Os06g0319700 protein. (124 aa)
	Q5WMY3_ORYSJ	cDNA clone:001-042-C09, full insert sequence. (188 aa)
	Q5VRN3_ORYSJ	WAT1-related protein. (358 aa)
	Q5VRN2_ORYSJ	WAT1-related protein. (360 aa)
	Q5VQR3_ORYSJ	cDNA clone:001-109-A05, full insert sequence. (112 aa)
	Q5TKP2_ORYSJ	cDNA clone:J013069H24, full insert sequence. (133 aa)
	Q5SNH7_ORYSJ	cDNA clone:001-003-F04, full insert sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	RPL39C	60S ribosomal protein L39-3; Belongs to the eukaryotic ribosomal protein eL39 family. (51 aa)
	Q5QMX1_ORYSJ	Os01g0514000 protein. (164 aa)
	Q5NB69_ORYSJ	cDNA clone:002-128-C07, full insert sequence. (119 aa)

Your Current Organism:

Oryza sativa Japonica

NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0N7KGJ7	A0A0P0VAC8	A0A0N7KGJ7	A0A0P0VAC8	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os01g0840700 protein.	0.965
A0A0N7KGJ7	A0A0P0VCB2	A0A0N7KGJ7	A0A0P0VCB2	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os01g0924800 protein.	0.976
A0A0N7KGJ7	A0A0P0VDM6	A0A0N7KGJ7	A0A0P0VDM6	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	WAT1-related protein.	0.950
A0A0N7KGJ7	A0A0P0VQP9	A0A0N7KGJ7	A0A0P0VQP9	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os02g0796900 protein.	0.965
A0A0N7KGJ7	A0A0P0VR59	A0A0N7KGJ7	A0A0P0VR59	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os02g0815000 protein.	0.977
A0A0N7KGJ7	A0A0P0VSV2	A0A0N7KGJ7	A0A0P0VSV2	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os03g0141000 protein.	0.984
A0A0N7KGJ7	A0A0P0WK98	A0A0N7KGJ7	A0A0P0WK98	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.978
A0A0N7KGJ7	A0A0P0WMY2	A0A0N7KGJ7	A0A0P0WMY2	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os05g0445500 protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.922
A0A0N7KGJ7	A0A0P0WQT3	A0A0N7KGJ7	A0A0P0WQT3	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os05g0555800 protein.	0.975
A0A0N7KGJ7	A0A0P0X000	A0A0N7KGJ7	A0A0P0X000	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os06g0674800 protein.	0.975
A0A0N7KGJ7	A0A0P0X9Y2	A0A0N7KGJ7	A0A0P0X9Y2	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os07g0670800 protein.	0.980
A0A0N7KGJ7	A0A0P0XC83	A0A0N7KGJ7	A0A0P0XC83	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os08g0162900 protein.	0.978
A0A0N7KGJ7	A0A0P0XID1	A0A0N7KGJ7	A0A0P0XID1	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os08g0524600 protein.	0.974
A0A0N7KGJ7	A0A0P0XJU9	A0A0N7KGJ7	A0A0P0XJU9	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os08g0542100 protein.	0.982
A0A0N7KGJ7	A0A0P0XLP8	A0A0N7KGJ7	A0A0P0XLP8	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os09g0413500 protein.	0.980
A0A0N7KGJ7	A0A0P0XW06	A0A0N7KGJ7	A0A0P0XW06	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os10g0465800 protein.	0.984
A0A0N7KGJ7	A3BR69_ORYSJ	A0A0N7KGJ7	A3BR69	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os08g0250300 protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.922
A0A0N7KGJ7	B1144G04.40-1	A0A0N7KGJ7	P0DKK1	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L37a-1; Belongs to the eukaryotic ribosomal protein eL43 family.	0.957
A0A0N7KGJ7	B7E905_ORYSJ	A0A0N7KGJ7	B7E905	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	cDNA clone:001-121-A02, full insert sequence.	0.974
A0A0N7KGJ7	B9G4E8_ORYSJ	A0A0N7KGJ7	B9G4E8	Os03g0139100 protein; Belongs to the universal ribosomal protein uL14 family.	Os09g0501700 protein.	0.974

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