12 items (Oryza sativa Japonica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	Q0DB62_ORYSJ	Os06g0598900 protein. (342 aa)
	A0A0P0Y3X2	Os11g0580000 protein. (467 aa)
	A0A0P0V5S3	Os01g0640200 protein; Belongs to the Casparian strip membrane proteins (CASP) family. (626 aa)
	A0A0N7KTY9	Os12g0431700 protein. (207 aa)
	Q0DR99_ORYSJ	Os03g0403600 protein. (416 aa)
	Q10PA9_ORYSJ	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	Q2QLX7_ORYSJ	Os12g0624800 protein. (587 aa)
	Q53MI2_ORYSJ	Survival motor neuron containing protein, expressed. (366 aa)
	Q6YTY0_ORYSJ	Small nuclear ribonucleoprotein G. (80 aa)
	Q6YU78_ORYSJ	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	Q6Z6C8_ORYSJ	Os02g0205400 protein. (342 aa)
	Q75K32_ORYSJ	Small nuclear ribonucleoprotein G. (80 aa)

Your Current Organism:

Oryza sativa Japonica

NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q0DB62_ORYSJ	Q6Z6C8_ORYSJ	Q0DB62	Q6Z6C8	Os06g0598900 protein.	Os02g0205400 protein.	0.940
Q10PA9_ORYSJ	Q53MI2_ORYSJ	Q10PA9	Q53MI2	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Survival motor neuron containing protein, expressed.	0.804
Q10PA9_ORYSJ	Q6YTY0_ORYSJ	Q10PA9	Q6YTY0	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.999
Q10PA9_ORYSJ	Q6YU78_ORYSJ	Q10PA9	Q6YU78	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
Q10PA9_ORYSJ	Q75K32_ORYSJ	Q10PA9	Q75K32	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.999
Q53MI2_ORYSJ	Q10PA9_ORYSJ	Q53MI2	Q10PA9	Survival motor neuron containing protein, expressed.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.804
Q53MI2_ORYSJ	Q6YTY0_ORYSJ	Q53MI2	Q6YTY0	Survival motor neuron containing protein, expressed.	Small nuclear ribonucleoprotein G.	0.819
Q53MI2_ORYSJ	Q6YU78_ORYSJ	Q53MI2	Q6YU78	Survival motor neuron containing protein, expressed.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.804
Q53MI2_ORYSJ	Q75K32_ORYSJ	Q53MI2	Q75K32	Survival motor neuron containing protein, expressed.	Small nuclear ribonucleoprotein G.	0.819
Q6YTY0_ORYSJ	Q10PA9_ORYSJ	Q6YTY0	Q10PA9	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
Q6YTY0_ORYSJ	Q53MI2_ORYSJ	Q6YTY0	Q53MI2	Small nuclear ribonucleoprotein G.	Survival motor neuron containing protein, expressed.	0.819
Q6YTY0_ORYSJ	Q6YU78_ORYSJ	Q6YTY0	Q6YU78	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
Q6YTY0_ORYSJ	Q75K32_ORYSJ	Q6YTY0	Q75K32	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein G.	0.971
Q6YU78_ORYSJ	Q10PA9_ORYSJ	Q6YU78	Q10PA9	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
Q6YU78_ORYSJ	Q53MI2_ORYSJ	Q6YU78	Q53MI2	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Survival motor neuron containing protein, expressed.	0.804
Q6YU78_ORYSJ	Q6YTY0_ORYSJ	Q6YU78	Q6YTY0	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.999
Q6YU78_ORYSJ	Q75K32_ORYSJ	Q6YU78	Q75K32	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.999
Q6Z6C8_ORYSJ	Q0DB62_ORYSJ	Q6Z6C8	Q0DB62	Os02g0205400 protein.	Os06g0598900 protein.	0.940
Q75K32_ORYSJ	Q10PA9_ORYSJ	Q75K32	Q10PA9	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
Q75K32_ORYSJ	Q53MI2_ORYSJ	Q75K32	Q53MI2	Small nuclear ribonucleoprotein G.	Survival motor neuron containing protein, expressed.	0.819

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