STRINGSTRING
A0A0P0Y2V6 A0A0P0Y2V6 B7ERU0_ORYSJ B7ERU0_ORYSJ Q0D7W8_ORYSJ Q0D7W8_ORYSJ Q0D7W9_ORYSJ Q0D7W9_ORYSJ Q0E3Z8_ORYSJ Q0E3Z8_ORYSJ OsJ_17170 OsJ_17170 OsJ_01157 OsJ_01157 Q8H4L0_ORYSJ Q8H4L0_ORYSJ Q8H3H8_ORYSJ Q8H3H8_ORYSJ Q84YS0_ORYSJ Q84YS0_ORYSJ Q7XU07_ORYSJ Q7XU07_ORYSJ Q7XQI1_ORYSJ Q7XQI1_ORYSJ Q7XM15_ORYSJ Q7XM15_ORYSJ DIM1 DIM1 Q75LD6_ORYSJ Q75LD6_ORYSJ Q75K32_ORYSJ Q75K32_ORYSJ Q6Z8Q6_ORYSJ Q6Z8Q6_ORYSJ Q6Z2M5_ORYSJ Q6Z2M5_ORYSJ Q6YU78_ORYSJ Q6YU78_ORYSJ Q6YTY0_ORYSJ Q6YTY0_ORYSJ Q6K8R4_ORYSJ Q6K8R4_ORYSJ Q6K2E9_ORYSJ Q6K2E9_ORYSJ Q6ETN4_ORYSJ Q6ETN4_ORYSJ Q69MX3_ORYSJ Q69MX3_ORYSJ Q69IN4_ORYSJ Q69IN4_ORYSJ LSM5 LSM5 Q5WMV0_ORYSJ Q5WMV0_ORYSJ LSM8 LSM8 Q5NAF5_ORYSJ Q5NAF5_ORYSJ LSM3 LSM3 Q53MQ0_ORYSJ Q53MQ0_ORYSJ Q33BE1_ORYSJ Q33BE1_ORYSJ Q2R066_ORYSJ Q2R066_ORYSJ Q2QY16_ORYSJ Q2QY16_ORYSJ Q10R21_ORYSJ Q10R21_ORYSJ Q10PA9_ORYSJ Q10PA9_ORYSJ OsJ_10509 OsJ_10509 Q10LA2_ORYSJ Q10LA2_ORYSJ Q0JDN9_ORYSJ Q0JDN9_ORYSJ Q0J803_ORYSJ Q0J803_ORYSJ Q0J7Y5_ORYSJ Q0J7Y5_ORYSJ A0A0P0V3J7 A0A0P0V3J7 A0A0P0VEK6 A0A0P0VEK6 A0A0P0VEN2 A0A0P0VEN2 A0A0P0VEP5 A0A0P0VEP5 A0A0P0VIZ4 A0A0P0VIZ4 A0A0P0VP35 A0A0P0VP35 A0A0P0VPC8 A0A0P0VPC8 A0A0P0WIH1 A0A0P0WIH1 A0A0P0WSW9 A0A0P0WSW9 A0A0P0WTW6 A0A0P0WTW6 A0A0P0XCL4 A0A0P0XCL4 A0A0P0XE29 A0A0P0XE29
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0Y2V6Os11g0495400 protein. (131 aa)
B7ERU0_ORYSJcDNA clone:J033042L23, full insert sequence. (427 aa)
Q0D7W8_ORYSJOs07g0203800 protein. (281 aa)
Q0D7W9_ORYSJOs07g0203700 protein. (666 aa)
Q0E3Z8_ORYSJOs02g0146400 protein. (358 aa)
OsJ_17170U1 small nuclear ribonucleoprotein A; Involved in nuclear pre-mRNA splicing. (253 aa)
OsJ_01157Probable U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (147 aa)
Q8H4L0_ORYSJOs07g0141600 protein. (484 aa)
Q8H3H8_ORYSJcDNA clone:J013160E09, full insert sequence. (301 aa)
Q84YS0_ORYSJcDNA clone:001-116-B04, full insert sequence. (348 aa)
Q7XU07_ORYSJcDNA clone:J013052N06, full insert sequence. (484 aa)
Q7XQI1_ORYSJOs04g0496400 protein. (476 aa)
Q7XM15_ORYSJcDNA, clone: J075162F09, full insert sequence. (110 aa)
DIM1Thioredoxin-like protein 4A, putative, expressed. (142 aa)
Q75LD6_ORYSJRNA-binding protein Luc7-like 2, putative, expressed. (329 aa)
Q75K32_ORYSJSmall nuclear ribonucleoprotein G. (80 aa)
Q6Z8Q6_ORYSJSplicing factor subunit; Belongs to the SF3B5 family. (87 aa)
Q6Z2M5_ORYSJSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
Q6YU78_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
Q6YTY0_ORYSJSmall nuclear ribonucleoprotein G. (80 aa)
Q6K8R4_ORYSJcDNA clone:J013052G16, full insert sequence. (418 aa)
Q6K2E9_ORYSJcDNA clone:001-016-D10, full insert sequence. (101 aa)
Q6ETN4_ORYSJOs02g0177500 protein. (86 aa)
Q69MX3_ORYSJcDNA clone:J023074K10, full insert sequence. (554 aa)
Q69IN4_ORYSJcDNA clone:J013129L11, full insert sequence. (375 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
Q5WMV0_ORYSJSmall nuclear ribonucleoprotein Sm D2. (105 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (99 aa)
Q5NAF5_ORYSJOs01g0226500 protein. (435 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (104 aa)
Q53MQ0_ORYSJThioredoxin-like protein 4B, putative, expressed. (152 aa)
Q33BE1_ORYSJTransposon protein, putative, CACTA, En/Spm sub-class, expressed. (463 aa)
Q2R066_ORYSJSmall nuclear ribonucleoprotein F, putative, expressed. (86 aa)
Q2QY16_ORYSJRNA recognition motif family protein, expressed. (502 aa)
Q10R21_ORYSJRNA recognition motif family protein, expressed. (416 aa)
Q10PA9_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
OsJ_10509U2 small nuclear ribonucleoprotein B'; Involved in nuclear pre-mRNA splicing. (232 aa)
Q10LA2_ORYSJU4/U6 small nuclear ribonucleoprotein PRP4, putative, expressed. (524 aa)
Q0JDN9_ORYSJcDNA clone:001-112-E09, full insert sequence. (97 aa)
Q0J803_ORYSJSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (64 aa)
Q0J7Y5_ORYSJSm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
A0A0P0V3J7Os01g0532200 protein. (467 aa)
A0A0P0VEK6Os02g0142300 protein. (128 aa)
A0A0P0VEN2Os02g0137400 protein. (858 aa)
A0A0P0VEP5Os02g0147300 protein. (185 aa)
A0A0P0VIZ4Os02g0478900 protein. (927 aa)
A0A0P0VP35Os02g0730200 protein. (146 aa)
A0A0P0VPC8Os02g0730100 protein. (147 aa)
A0A0P0WIH1Os05g0163250 protein. (559 aa)
A0A0P0WSW9Os06g0167000 protein. (1130 aa)
A0A0P0WTW6Os06g0214550 protein. (222 aa)
A0A0P0XCL4Os08g0177700 protein. (108 aa)
A0A0P0XE29Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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