STRINGSTRING
A0A0P0YBP9 A0A0P0YBP9 P0560B06.11 P0560B06.11 Q8SB66_ORYSJ Q8SB66_ORYSJ Q8S672_ORYSJ Q8S672_ORYSJ Q8S667_ORYSJ Q8S667_ORYSJ CYCD2-2 CYCD2-2 CDKB1-1 CDKB1-1 CYCD1-2 CYCD1-2 CDKG-2 CDKG-2 Q7XKD9_ORYSJ Q7XKD9_ORYSJ OsJ_30723 OsJ_30723 CYCA1-1 CYCA1-1 CYCA3-1 CYCA3-1 Q6ZL18_ORYSJ Q6ZL18_ORYSJ Q6ZCC7_ORYSJ Q6ZCC7_ORYSJ Q6ZC85_ORYSJ Q6ZC85_ORYSJ CDKC-1-2 CDKC-1-2 CYCT1_2 CYCT1_2 Q6Z2N2_ORYSJ Q6Z2N2_ORYSJ CYCD4-1 CYCD4-1 Q6YU34_ORYSJ Q6YU34_ORYSJ CycF1-4 CycF1-4 CYCF1-3 CYCF1-3 CYCF2-2 CYCF2-2 CDKG-1 CDKG-1 CycF2-1 CycF2-1 CYCF1-1 CYCF1-1 CDKC-1 CDKC-1 Q6H657_ORYSJ Q6H657_ORYSJ Q6ETK7_ORYSJ Q6ETK7_ORYSJ CYCD6-1 CYCD6-1 CYCD3-1 CYCD3-1 CIPK24 CIPK24 Q69P44_ORYSJ Q69P44_ORYSJ LAX12_ORYSJ LAX12_ORYSJ CYCD1-1 CYCD1-1 Q65X21_ORYSJ Q65X21_ORYSJ CDKF-1 CDKF-1 Q5SNL8_ORYSJ Q5SNL8_ORYSJ OsJ_04119 OsJ_04119 CDKC-2 CDKC-2 Q53N86_ORYSJ Q53N86_ORYSJ CYCD7-1 CYCD7-1 LAX14_ORYSJ LAX14_ORYSJ CYCD4-2 CYCD4-2 Q45GC6_ORYSJ Q45GC6_ORYSJ CYCT1-3 CYCT1-3 Q2R4I6_ORYSJ Q2R4I6_ORYSJ Q2R481_ORYSJ Q2R481_ORYSJ CDKF-2 CDKF-2 DRTS_ORYSJ DRTS_ORYSJ A0A0N7KFN0 A0A0N7KFN0 A0A0N7KJC3 A0A0N7KJC3 A0A0N7KJZ7 A0A0N7KJZ7 A0A0N7KRG4 A0A0N7KRG4 A0A0N7KSM5 A0A0N7KSM5 A0A0N7KTY6 A0A0N7KTY6 A0A0P0UZC0 A0A0P0UZC0 A0A0P0VC65 A0A0P0VC65 A0A0P0VI47 A0A0P0VI47 A0A0P0VJ77 A0A0P0VJ77 A0A0P0VJX9 A0A0P0VJX9 A0A0P0VXG3 A0A0P0VXG3 A0A0P0WMY6 A0A0P0WMY6 A0A0P0WMZ2 A0A0P0WMZ2 A0A0P0WN18 A0A0P0WN18 A0A0P0X092 A0A0P0X092 A0A0P0XA24 A0A0P0XA24 A0A0P0XMS5 A0A0P0XMS5 A0A0P0XQM6 A0A0P0XQM6 A0A0P0XZM3 A0A0P0XZM3 A0A0P0Y081 A0A0P0Y081 A0A0P0Y0B2 A0A0P0Y0B2 A0A0P0Y0D5 A0A0P0Y0D5 A0A0P0Y9L2 A0A0P0Y9L2 A0A0P0Y9L4 A0A0P0Y9L4 A0A0P0Y9L9 A0A0P0Y9L9 CYCT1-1-2 CYCT1-1-2 CYCA3-2 CYCA3-2 CYCD5-2 CYCD5-2 CYCD5-3 CYCD5-3 CYCF3-1 CYCF3-1 CYCF3-2 CYCF3-2 SDS SDS Q10P71_ORYSJ Q10P71_ORYSJ CYCD2-3 CYCD2-3 CYCH1-1 CYCH1-1 CYCA1-2 CYCA1-2 Q0JK78_ORYSJ Q0JK78_ORYSJ Q0JBE1_ORYSJ Q0JBE1_ORYSJ CYCD2-1 CYCD2-1 CYCA1-3 CYCA1-3 Q0INI1_ORYSJ Q0INI1_ORYSJ CYCT1-1 CYCT1-1 CYCD5-1 CYCD5-1 CYCA1-4 CYCA1-4 Q0D412_ORYSJ Q0D412_ORYSJ CDKD-1 CDKD-1 CDKA-2 CDKA-2 CDKA-1 CDKA-1 C7JAB9_ORYSJ C7JAB9_ORYSJ B9FYW2_ORYSJ B9FYW2_ORYSJ B9FMY7_ORYSJ B9FMY7_ORYSJ A0A0P0Y9R0 A0A0P0Y9R0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0YBP9Os12g0577700 protein. (740 aa)
P0560B06.11Putative CRK1 protein. (558 aa)
Q8SB66_ORYSJProtein kinase domain containing protein. (308 aa)
Q8S672_ORYSJProtein kinase domain containing protein, expressed; Belongs to the protein kinase superfamily. (326 aa)
Q8S667_ORYSJProtein kinase domain containing protein, expressed; Belongs to the protein kinase superfamily. (325 aa)
CYCD2-2Cyclin-D2-2; Belongs to the cyclin family. Cyclin D subfamily. (356 aa)
CDKB1-1Cyclin-dependent kinase B1-1. (303 aa)
CYCD1-2Cyclin-D1-2; Belongs to the cyclin family. Cyclin D subfamily. (354 aa)
CDKG-2Cyclin-dependent kinase G-2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (710 aa)
Q7XKD9_ORYSJRNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (451 aa)
OsJ_30723Auxin transporter-like protein 3; Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity); Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily. (547 aa)
CYCA1-1Cyclin-A1-1; Involved in the control of the cell cycle at the G2/M (mitosis) transition; Belongs to the cyclin family. Cyclin AB subfamily. (508 aa)
CYCA3-1Cyclin-A3-1; Belongs to the cyclin family. Cyclin AB subfamily. (373 aa)
Q6ZL18_ORYSJcDNA clone:J033072E11, full insert sequence. (131 aa)
Q6ZCC7_ORYSJOs08g0112500 protein. (748 aa)
Q6ZC85_ORYSJcDNA clone:J013129O14, full insert sequence. (604 aa)
CDKC-1-2Cyclin-dependent kinase C-3. (324 aa)
CYCT1_2Cyclin-T1-2. (630 aa)
Q6Z2N2_ORYSJcDNA clone:J033106M17, full insert sequence. (289 aa)
CYCD4-1Cyclin-D4-1; Belongs to the cyclin family. Cyclin D subfamily. (356 aa)
Q6YU34_ORYSJcDNA clone:J023088A16, full insert sequence. (729 aa)
CycF1-4Putative cyclin-F1-4; Belongs to the cyclin family. Cyclin F subfamily. (432 aa)
CYCF1-3Putative cyclin-F1-3; Belongs to the cyclin family. Cyclin F subfamily. (389 aa)
CYCF2-2Cyclin-F2-2; Belongs to the cyclin family. Cyclin F subfamily. (446 aa)
CDKG-1Cyclin-dependent kinase G-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (693 aa)
CycF2-1Putative cyclin-F2-1; Belongs to the cyclin family. Cyclin F subfamily. (390 aa)
CYCF1-1Putative cyclin-F1-1; Belongs to the cyclin family. Cyclin F subfamily. (369 aa)
CDKC-1Cyclin-dependent kinase C-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (519 aa)
Q6H657_ORYSJOs02g0644500 protein. (544 aa)
Q6ETK7_ORYSJOs02g0179800 protein. (1140 aa)
CYCD6-1Cyclin-D6-1; Belongs to the cyclin family. Cyclin D subfamily. (320 aa)
CYCD3-1Cyclin-D3-1. (342 aa)
CIPK24CBL-interacting protein kinase 24; Involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Operates in synergy with CBL4 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium- dependent manner. (453 aa)
Q69P44_ORYSJOs09g0423300 protein. (962 aa)
LAX12_ORYSJAuxin transporter-like protein 2; Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity); Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily. (482 aa)
CYCD1-1Cyclin-D1-1; Belongs to the cyclin family. Cyclin D subfamily. (363 aa)
Q65X21_ORYSJOs05g0108500 protein. (65 aa)
CDKF-1Cyclin-dependent kinase F-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (479 aa)
Q5SNL8_ORYSJcDNA clone:J033143J20, full insert sequence. (195 aa)
OsJ_04119Auxin transporter-like protein 1; Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity). (492 aa)
CDKC-2Cyclin-dependent kinase C-2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (513 aa)
Q53N86_ORYSJProtein kinase domain containing protein, expressed. (579 aa)
CYCD7-1Putative cyclin-D7-1; Belongs to the cyclin family. Cyclin D subfamily. (320 aa)
LAX14_ORYSJPutative auxin transporter-like protein 4; Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity); Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily. (480 aa)
CYCD4-2Cyclin-D4-2; Belongs to the cyclin family. Cyclin D subfamily. (383 aa)
Q45GC6_ORYSJcDNA, clone: J080066H20, full insert sequence. (154 aa)
CYCT1-3Cyclin-T1-3; Belongs to the cyclin family. Cyclin T subfamily. (490 aa)
Q2R4I6_ORYSJCDK-activating kinase assembly factor MAT1 family protein, expressed. (195 aa)
Q2R481_ORYSJBifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. (521 aa)
CDKF-2Putative cyclin-dependent kinase F-2. (327 aa)
DRTS_ORYSJPutative bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Can play two different roles depending on the source of dihydrofolate: de novo synthesis of tetrahydrofolate or recycling of the dihydrofolate released as one of the end products of the TS catalyzed reaction. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP (By similarity). (494 aa)
A0A0N7KFN0Os02g0607100 protein; Belongs to the cyclin family. (350 aa)
A0A0N7KJC3General transcription factor IIH subunit. (495 aa)
A0A0N7KJZ7Os04g0693100 protein. (208 aa)
A0A0N7KRG4Os10g0156200 protein. (200 aa)
A0A0N7KSM5Os11g0218678 protein. (75 aa)
A0A0N7KTY6Os12g0427450 protein; Belongs to the protein kinase superfamily. (383 aa)
A0A0P0UZC0Os01g0201000 protein. (128 aa)
A0A0P0VC65Os01g0925700 protein. (371 aa)
A0A0P0VI47Os02g0304500 protein. (521 aa)
A0A0P0VJ77Os02g0492300 protein. (298 aa)
A0A0P0VJX9Os02g0527600 protein. (781 aa)
A0A0P0VXG3Os03g0349200 protein. (130 aa)
A0A0P0WMY6Os05g0447620 protein. (213 aa)
A0A0P0WMZ2Os05g0447580 protein. (369 aa)
A0A0P0WN18Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (584 aa)
A0A0P0X092Os06g0693900 protein. (288 aa)
A0A0P0XA24Os07g0668000 protein. (31 aa)
A0A0P0XMS5Os09g0445900 protein. (181 aa)
A0A0P0XQM6Os09g0566550 protein. (751 aa)
A0A0P0XZM3Os11g0162000 protein. (656 aa)
A0A0P0Y081Os11g0218560 protein. (79 aa)
A0A0P0Y0B2Os11g0218619 protein. (125 aa)
A0A0P0Y0D5Os11g0218737 protein. (144 aa)
A0A0P0Y9L2Os12g0427000 protein. (426 aa)
A0A0P0Y9L4Os12g0298950 protein; Belongs to the cyclin family. (447 aa)
A0A0P0Y9L9Os12g0428200 protein. (260 aa)
CYCT1-1-2Cyclin-T1-4; Belongs to the cyclin family. Cyclin T subfamily. (543 aa)
CYCA3-2Cyclin-A3-2; Belongs to the cyclin family. Cyclin AB subfamily. (385 aa)
CYCD5-2Cyclin-D5-2; Belongs to the cyclin family. Cyclin D subfamily. (365 aa)
CYCD5-3Cyclin-D5-3; Belongs to the cyclin family. Cyclin D subfamily. (345 aa)
CYCF3-1Putative cyclin-F3-1; Belongs to the cyclin family. Cyclin F subfamily. (389 aa)
CYCF3-2Putative cyclin-F3-2; Belongs to the cyclin family. Cyclin F subfamily. (406 aa)
SDSCyclin-SDS-like; Meiosis-specific cyclin. Required for normal homolog synapsis and recombination in early to mid-prophase 1. (469 aa)
Q10P71_ORYSJcDNA clone:J033131K12, full insert sequence. (524 aa)
CYCD2-3Putative cyclin-D2-3; Belongs to the cyclin family. Cyclin D subfamily. (405 aa)
CYCH1-1Cyclin-H1-1; Involved in cell cycle regulation. May be a regulatory subunit of CDKD-1/CAK-R2. (330 aa)
CYCA1-2Cyclin-A1-2; Belongs to the cyclin family. Cyclin AB subfamily. (477 aa)
Q0JK78_ORYSJOs01g0691600 protein. (580 aa)
Q0JBE1_ORYSJcDNA clone:J023108N03, full insert sequence. (520 aa)
CYCD2-1Cyclin-D2-1; Belongs to the cyclin family. Cyclin D subfamily. (308 aa)
CYCA1-3Cyclin-A1-3. (491 aa)
Q0INI1_ORYSJOs12g0446700 protein. (189 aa)
CYCT1-1Cyclin-T1-1; Belongs to the cyclin family. Cyclin T subfamily. (446 aa)
CYCD5-1Cyclin-D5-1; Belongs to the cyclin family. Cyclin D subfamily. (367 aa)
CYCA1-4Cyclin-A1-4; Belongs to the cyclin family. Cyclin AB subfamily. (356 aa)
Q0D412_ORYSJOs07g0655500 protein. (1447 aa)
CDKD-1Cyclin-dependent kinase D-1; CDK-activating kinase that may control G1/S phase progression. May control the rate of cell differentiation to accomplish proper development of organs, or in response to a changing environment. Forms a complex with cyclin CYCH1-1 that phosphorylates CDKA-1 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II. (424 aa)
CDKA-2Cyclin-dependent kinase A-2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (292 aa)
CDKA-1Cyclin-dependent kinase A-1. (294 aa)
C7JAB9_ORYSJOs12g0203000 protein. (273 aa)
B9FYW2_ORYSJOs02g0600266 protein; Belongs to the cyclin family. (333 aa)
B9FMY7_ORYSJOs05g0198700 protein. (81 aa)
A0A0P0Y9R0Os12g0427100 protein; Belongs to the protein kinase superfamily. (360 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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