Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A0P0W4R4 | Q0JBJ4_ORYSJ | A0A0P0W4R4 | Q0JBJ4 | Os03g0818800 protein. | Os04g0529100 protein. | 0.468 |
| A0A0P0YBP3 | Q0J5D4_ORYSJ | A0A0P0YBP3 | Q0J5D4 | Os12g0582900 protein. | cDNA clone:002-115-F07, full insert sequence. | 0.610 |
| AP2-1 | Q0JBJ4_ORYSJ | Q2TQ34 | Q0JBJ4 | APETALA2-like protein 1; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Regulator of starch biosynthesis especially during seed development (e.g. endosperm starch granules); represses the expression of type I starch synthesis genes. Prevents lemma and palea elongation as well as grain growth. Belongs to the AP2/ERF transcription factor family. AP2 subfamily. | Os04g0529100 protein. | 0.437 |
| AP2-3 | FZP | Q8H443 | Q8H3Q1 | APETALA2-like protein 3; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Together with IDS1, controls synergistically inflorescence architecture and floral meristem establishment via the regulation of spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules and of spikelet meristem genes. Prevents lemma and palea elongation as well as grain growth. Regulates the transition from spikelet meristem to floral meristem, spikelet meristem determinancy and the floral organ development. | Ethylene-responsive transcription factor FZP; Required to prevent the formation of axillary meristems within the spikelet meristem and permit the subsequent establishment of floral meristem identity. Mediates the transition from spikelet to floret meristem. Determines the transition from panicle branching to spikelet formation. May specify floral organ identity by regulating the class B genes (Agamous-like genes) MADS6 and MADS17, as well as class E genes MADS1, MADS7 and MADS8 in floral meristem. Possesses transactivation activity. Belongs to the AP2/ERF transcription factor family. E [...] | 0.532 |
| AP2-3 | Q0JBJ4_ORYSJ | Q8H443 | Q0JBJ4 | APETALA2-like protein 3; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Together with IDS1, controls synergistically inflorescence architecture and floral meristem establishment via the regulation of spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules and of spikelet meristem genes. Prevents lemma and palea elongation as well as grain growth. Regulates the transition from spikelet meristem to floral meristem, spikelet meristem determinancy and the floral organ development. | Os04g0529100 protein. | 0.411 |
| AP2-4 | Q0JBJ4_ORYSJ | A0A0N7KMH0 | Q0JBJ4 | APETALA2-like protein 4; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Prevents lemma and palea elongation as well as grain growth. | Os04g0529100 protein. | 0.407 |
| AP2D4 | Q7XLG6_ORYSJ | Q2TQ39 | Q7XLG6 | Transcription factor AP2D4. | cDNA clone:J033044C14, full insert sequence. | 0.439 |
| B7ED44_ORYSJ | SMOS1 | B7ED44 | X5HYT8 | cDNA clone:J013098A10, full insert sequence. | AP2-like ethylene-responsive transcription factor SMOS1; Transcription activator involved in the control of organ size. Acts as an auxin-dependent regulator for cell expansion during organ size control. Binds to the promoter of PHI-1, a gene that regulates cell expansion, and positively regulates its expression. Cooperatively functions in a transactivating complex with DLT to enhance the transcription of the SMOS1 target PHI-1, and to regulate plant organ size. Interaction between SMOS1 and DLT is a crosstalk point for auxin and brassinosteroid (BR) signaling. Acts as positive regulato [...] | 0.456 |
| B7F8P7_ORYSJ | Q0JB99_ORYSJ | B7F8P7 | Q0JB99 | cDNA, clone: J065136G16, full insert sequence. | cDNA, clone: J100039E18, full insert sequence. | 0.670 |
| B7F8P7_ORYSJ | Q6H7H6_ORYSJ | B7F8P7 | Q6H7H6 | cDNA, clone: J065136G16, full insert sequence. | cDNA clone:001-205-B11, full insert sequence. | 0.627 |
| DREB1H | Q5NAQ6_ORYSJ | Q0J090 | Q5NAQ6 | Dehydration-responsive element-binding protein 1H; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). Belongs to the AP2/ERF transcription factor family. ERF subfamily. | cDNA clone:002-107-B02, full insert sequence. | 0.456 |
| FZP | AP2-3 | Q8H3Q1 | Q8H443 | Ethylene-responsive transcription factor FZP; Required to prevent the formation of axillary meristems within the spikelet meristem and permit the subsequent establishment of floral meristem identity. Mediates the transition from spikelet to floret meristem. Determines the transition from panicle branching to spikelet formation. May specify floral organ identity by regulating the class B genes (Agamous-like genes) MADS6 and MADS17, as well as class E genes MADS1, MADS7 and MADS8 in floral meristem. Possesses transactivation activity. Belongs to the AP2/ERF transcription factor family. E [...] | APETALA2-like protein 3; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Together with IDS1, controls synergistically inflorescence architecture and floral meristem establishment via the regulation of spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules and of spikelet meristem genes. Prevents lemma and palea elongation as well as grain growth. Regulates the transition from spikelet meristem to floral meristem, spikelet meristem determinancy and the floral organ development. | 0.532 |
| Q0DSE7_ORYSJ | Q0J525_ORYSJ | Q0DSE7 | Q0J525 | Os03g0313100 protein. | Os08g0474000 protein. | 0.491 |
| Q0J525_ORYSJ | Q0DSE7_ORYSJ | Q0J525 | Q0DSE7 | Os08g0474000 protein. | Os03g0313100 protein. | 0.491 |
| Q0J5D4_ORYSJ | A0A0P0YBP3 | Q0J5D4 | A0A0P0YBP3 | cDNA clone:002-115-F07, full insert sequence. | Os12g0582900 protein. | 0.610 |
| Q0JB99_ORYSJ | B7F8P7_ORYSJ | Q0JB99 | B7F8P7 | cDNA, clone: J100039E18, full insert sequence. | cDNA, clone: J065136G16, full insert sequence. | 0.670 |
| Q0JB99_ORYSJ | Q10A97_ORYSJ | Q0JB99 | Q10A97 | cDNA, clone: J100039E18, full insert sequence. | cDNA clone:006-211-G07, full insert sequence. | 0.645 |
| Q0JBJ4_ORYSJ | A0A0P0W4R4 | Q0JBJ4 | A0A0P0W4R4 | Os04g0529100 protein. | Os03g0818800 protein. | 0.468 |
| Q0JBJ4_ORYSJ | AP2-1 | Q0JBJ4 | Q2TQ34 | Os04g0529100 protein. | APETALA2-like protein 1; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Regulator of starch biosynthesis especially during seed development (e.g. endosperm starch granules); represses the expression of type I starch synthesis genes. Prevents lemma and palea elongation as well as grain growth. Belongs to the AP2/ERF transcription factor family. AP2 subfamily. | 0.437 |
| Q0JBJ4_ORYSJ | AP2-3 | Q0JBJ4 | Q8H443 | Os04g0529100 protein. | APETALA2-like protein 3; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Together with IDS1, controls synergistically inflorescence architecture and floral meristem establishment via the regulation of spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules and of spikelet meristem genes. Prevents lemma and palea elongation as well as grain growth. Regulates the transition from spikelet meristem to floral meristem, spikelet meristem determinancy and the floral organ development. | 0.411 |
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