STRINGSTRING
Q10BX7_ORYSJ Q10BX7_ORYSJ A0A0N7KSQ1 A0A0N7KSQ1 A0A0P0WGS4 A0A0P0WGS4 A0A0P0XR38 A0A0P0XR38 Q0JKK3_ORYSJ Q0JKK3_ORYSJ Q10N87_ORYSJ Q10N87_ORYSJ Q2QYY3_ORYSJ Q2QYY3_ORYSJ U2AF65B U2AF65B U2AF65A U2AF65A Q2R134_ORYSJ Q2R134_ORYSJ Q33B10_ORYSJ Q33B10_ORYSJ Q5Z990_ORYSJ Q5Z990_ORYSJ C3H16_ORYSJ C3H16_ORYSJ Q6YW54_ORYSJ Q6YW54_ORYSJ Q6YYV1_ORYSJ Q6YYV1_ORYSJ Q6Z050_ORYSJ Q6Z050_ORYSJ Q6ZDR7_ORYSJ Q6ZDR7_ORYSJ Q7F8Y1_ORYSJ Q7F8Y1_ORYSJ Q8H393_ORYSJ Q8H393_ORYSJ Q8L460_ORYSJ Q8L460_ORYSJ Q8LHL0_ORYSJ Q8LHL0_ORYSJ U2AF35A U2AF35A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q10BX7_ORYSJRNA recognition motif family protein, expressed. (959 aa)
A0A0N7KSQ1Os11g0250000 protein. (441 aa)
A0A0P0WGS4Os04g0682400 protein. (1008 aa)
A0A0P0XR38Os09g0549500 protein. (276 aa)
Q0JKK3_ORYSJOs01g0667800 protein. (207 aa)
Q10N87_ORYSJPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (647 aa)
Q2QYY3_ORYSJRNA recognition motif family protein, expressed. (1097 aa)
U2AF65BSplicing factor U2af large subunit B; Necessary for the splicing of pre-mRNA. (548 aa)
U2AF65ASplicing factor U2af large subunit A; Necessary for the splicing of pre-mRNA. (574 aa)
Q2R134_ORYSJRNA recognition motif family protein, expressed. (441 aa)
Q33B10_ORYSJRNA recognition motif family protein, expressed. (438 aa)
Q5Z990_ORYSJcDNA clone:J033121H17, full insert sequence. (273 aa)
C3H16_ORYSJZinc finger CCCH domain-containing protein 16. (678 aa)
Q6YW54_ORYSJcDNA clone:J023069P08, full insert sequence. (279 aa)
Q6YYV1_ORYSJPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (662 aa)
Q6Z050_ORYSJPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
Q6ZDR7_ORYSJcDNA clone:001-125-B07, full insert sequence. (289 aa)
Q7F8Y1_ORYSJPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (659 aa)
Q8H393_ORYSJcDNA clone:001-114-E11, full insert sequence. (427 aa)
Q8L460_ORYSJcDNA, clone: J100058K04, full insert sequence. (368 aa)
Q8LHL0_ORYSJcDNA clone:J023050C05, full insert sequence. (275 aa)
U2AF35ASplicing factor U2af small subunit A; Necessary for the splicing of pre-mRNA. (290 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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