STRINGSTRING
Q5N7Q4_ORYSJ Q5N7Q4_ORYSJ Q0J0N6_ORYSJ Q0J0N6_ORYSJ OsJ_30298 OsJ_30298 Q0IZH1_ORYSJ Q0IZH1_ORYSJ UVR3 UVR3 OJ1293_E04.25 OJ1293_E04.25 Q0DEQ5_ORYSJ Q0DEQ5_ORYSJ NADE_ORYSJ NADE_ORYSJ PANC PANC B9F460_ORYSJ B9F460_ORYSJ OsJ_05277 OsJ_05277 B7F9R5_ORYSJ B7F9R5_ORYSJ B7EME6_ORYSJ B7EME6_ORYSJ A0A0P0Y881 A0A0P0Y881 A0A0P0Y4W2 A0A0P0Y4W2 A0A0P0XX00 A0A0P0XX00 A0A0P0XWD3 A0A0P0XWD3 A0A0P0XLS3 A0A0P0XLS3 A0A0P0XEB2 A0A0P0XEB2 A0A0P0XD69 A0A0P0XD69 A0A0P0XCU4 A0A0P0XCU4 RIBF RIBF Q10LM1_ORYSJ Q10LM1_ORYSJ Q10MK7_ORYSJ Q10MK7_ORYSJ ASNS1_ORYSJ ASNS1_ORYSJ Q10PA1_ORYSJ Q10PA1_ORYSJ Q10Q53_ORYSJ Q10Q53_ORYSJ Q10R16_ORYSJ Q10R16_ORYSJ CTU2 CTU2 Q2QNV2_ORYSJ Q2QNV2_ORYSJ Q2QNV3_ORYSJ Q2QNV3_ORYSJ Q2QP62_ORYSJ Q2QP62_ORYSJ Q2QQA6_ORYSJ Q2QQA6_ORYSJ Q2QVC1_ORYSJ Q2QVC1_ORYSJ Q2QYF8_ORYSJ Q2QYF8_ORYSJ Q336S5_ORYSJ Q336S5_ORYSJ Q336U1_ORYSJ Q336U1_ORYSJ Q336U5_ORYSJ Q336U5_ORYSJ Q338J4_ORYSJ Q338J4_ORYSJ Q338R8_ORYSJ Q338R8_ORYSJ Q33BK6_ORYSJ Q33BK6_ORYSJ OJ1001_B06.12 OJ1001_B06.12 Q6AVR9_ORYSJ Q6AVR9_ORYSJ PHR PHR Q6H4P7_ORYSJ Q6H4P7_ORYSJ Q6H513_ORYSJ Q6H513_ORYSJ Q6K4Q1_ORYSJ Q6K4Q1_ORYSJ Q6K8D2_ORYSJ Q6K8D2_ORYSJ Q6YUS0_ORYSJ Q6YUS0_ORYSJ Q6YW24_ORYSJ Q6YW24_ORYSJ Q6YXC2_ORYSJ Q6YXC2_ORYSJ Q6Z2G8_ORYSJ Q6Z2G8_ORYSJ APR1 APR1 Q6Z5V6_ORYSJ Q6Z5V6_ORYSJ NCS6 NCS6 Q6Z6L3_ORYSJ Q6Z6L3_ORYSJ Q6ZHE6_ORYSJ Q6ZHE6_ORYSJ OJ1014_E09.9 OJ1014_E09.9 Q75HQ2_ORYSJ Q75HQ2_ORYSJ ETFA ETFA Q75M01_ORYSJ Q75M01_ORYSJ Q7EYE4_ORYSJ Q7EYE4_ORYSJ ETFB ETFB Q7XE49_ORYSJ Q7XE49_ORYSJ Q7XHV1_ORYSJ Q7XHV1_ORYSJ Q84MN8_ORYSJ Q84MN8_ORYSJ Q84PX0_ORYSJ Q84PX0_ORYSJ Q851K9_ORYSJ Q851K9_ORYSJ OsCRY2 OsCRY2 Q8H454_ORYSJ Q8H454_ORYSJ Q8H4X9_ORYSJ Q8H4X9_ORYSJ Q8H907_ORYSJ Q8H907_ORYSJ Q8S292_ORYSJ Q8S292_ORYSJ Q8S5M6_ORYSJ Q8S5M6_ORYSJ Q943W5_ORYSJ Q943W5_ORYSJ Q94E74_ORYSJ Q94E74_ORYSJ CPCT CPCT P0561B08.33 P0561B08.33 A0A0N7KGK1 A0A0N7KGK1 A0A0N7KH89 A0A0N7KH89 A0A0N7KI21 A0A0N7KI21 A0A0N7KRW9 A0A0N7KRW9 A0A0N7KSC9 A0A0N7KSC9 A0A0P0UX97 A0A0P0UX97 A0A0P0UYI0 A0A0P0UYI0 A0A0P0V1F4 A0A0P0V1F4 A0A0P0V4V4 A0A0P0V4V4 A0A0P0VB72 A0A0P0VB72 A0A0P0VFN6 A0A0P0VFN6 A0A0P0VHF3 A0A0P0VHF3 A0A0P0VMX2 A0A0P0VMX2 A0A0P0VP63 A0A0P0VP63 A0A0P0VRD5 A0A0P0VRD5 A0A0P0VS27 A0A0P0VS27 A0A0P0VX51 A0A0P0VX51 A0A0P0WAS3 A0A0P0WAS3 A0A0P0WGE6 A0A0P0WGE6 A0A0P0X3L4 A0A0P0X3L4 A0A0P0X554 A0A0P0X554 Q0JFE2_ORYSJ Q0JFE2_ORYSJ Q5VRX8_ORYSJ Q5VRX8_ORYSJ Q5W6Y8_ORYSJ Q5W6Y8_ORYSJ Q5Z7K5_ORYSJ Q5Z7K5_ORYSJ Q5ZAV7_ORYSJ Q5ZAV7_ORYSJ Q5ZB74_ORYSJ Q5ZB74_ORYSJ Q60EJ0_ORYSJ Q60EJ0_ORYSJ Q60EV0_ORYSJ Q60EV0_ORYSJ CRYD CRYD Q652J5_ORYSJ Q652J5_ORYSJ Q657H4_ORYSJ Q657H4_ORYSJ Q65XS4_ORYSJ Q65XS4_ORYSJ Q67UV9_ORYSJ Q67UV9_ORYSJ Q67WM2_ORYSJ Q67WM2_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q5N7Q4_ORYSJcDNA clone:002-128-A02, full insert sequence. (274 aa)
Q0J0N6_ORYSJOs09g0503400 protein. (1095 aa)
OsJ_30298Cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial; Nuclear genome-encoded factor required for normal assembly of chloroplast polysomes; Belongs to the class-I aminoacyl-tRNA synthetase family. (569 aa)
Q0IZH1_ORYSJOs09g0569800 protein. (858 aa)
UVR3(6-4)DNA photolyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the photoreactivation of pyrimidine [6-4] pyrimidone photoproduct (6-4 products) (By similarity). (551 aa)
OJ1293_E04.25Nicotinamide/nicotinic acid mononucleotide adenylyltransferase; Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate. Belongs to the eukaryotic NMN adenylyltransferase family. (249 aa)
Q0DEQ5_ORYSJcDNA clone:J013037K06, full insert sequence. (806 aa)
NADE_ORYSJGlutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. (735 aa)
PANCPantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine to form pantothenate. Essential for panthotenate biosynthesis (Probable). (313 aa)
B9F460_ORYSJOs02g0810450 protein. (733 aa)
OsJ_05277Phosphopantetheine adenylyltransferase 2; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Does not accept 4'-phosphopantothenoylcysteine as a substrate (By similarity); Belongs to the eukaryotic CoaD family. (217 aa)
B7F9R5_ORYSJcDNA, clone: J090072P03, full insert sequence. (749 aa)
B7EME6_ORYSJcDNA clone:J033048I03, full insert sequence. (189 aa)
A0A0P0Y881Os12g0181200 protein. (391 aa)
A0A0P0Y4W2Os11g0621825 protein. (96 aa)
A0A0P0XX00Os10g0548850 protein. (405 aa)
A0A0P0XWD3Os10g0506200 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1049 aa)
A0A0P0XLS3Os09g0347900 protein. (124 aa)
A0A0P0XEB2Os08g0320000 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (175 aa)
A0A0P0XD69Os08g0224800 protein. (430 aa)
A0A0P0XCU4Os08g0191800 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (357 aa)
RIBFFAD synthetase, chloroplastic; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. (391 aa)
Q10LM1_ORYSJPhotolyase/blue-light receptor PHR2, putative, expressed. (459 aa)
Q10MK7_ORYSJUniversal stress protein family protein, expressed. (180 aa)
ASNS1_ORYSJAsparagine synthetase [glutamine-hydrolyzing] 1; Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem. (604 aa)
Q10PA1_ORYSJProtein kinase family protein, putative, expressed. (652 aa)
Q10Q53_ORYSJMethionyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family. (602 aa)
Q10R16_ORYSJtRNA methyl transferase family protein, expressed. (488 aa)
CTU2Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (464 aa)
Q2QNV2_ORYSJcDNA clone:J013066N15, full insert sequence. (169 aa)
Q2QNV3_ORYSJcDNA clone:J023047P03, full insert sequence. (160 aa)
Q2QP62_ORYSJTryptophanyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family. (408 aa)
Q2QQA6_ORYSJUniversal stress protein family protein, expressed. (225 aa)
Q2QVC1_ORYSJArgininosuccinate synthase, chloroplast, putative, expressed. (481 aa)
Q2QYF8_ORYSJCytidylyltransferase family protein, expressed. (424 aa)
Q336S5_ORYSJU-box domain containing protein, expressed. (782 aa)
Q336U1_ORYSJcDNA clone:J033098H05, full insert sequence. (431 aa)
Q336U5_ORYSJU-box domain containing protein, expressed. (899 aa)
Q338J4_ORYSJMethionyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family. (605 aa)
Q338R8_ORYSJCytidylyltransferase family protein, expressed. (425 aa)
Q33BK6_ORYSJU-box domain containing protein, expressed. (811 aa)
OJ1001_B06.12Asparagine synthetase [glutamine-hydrolyzing] 2; Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem. (591 aa)
Q6AVR9_ORYSJProtein kinase domain containing protein, expressed. (938 aa)
PHRDeoxyribodipyrimidine photo-lyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutylpyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Required for plant survival in the presence of UV-B light. Not involved in the repair of (6-4) photoproducts. Belongs to the DNA photolyase class-2 family. (506 aa)
Q6H4P7_ORYSJcDNA clone:J013169D12, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family. (1094 aa)
Q6H513_ORYSJcDNA clone:J023056M07, full insert sequence. (315 aa)
Q6K4Q1_ORYSJOs02g0787200 protein. (772 aa)
Q6K8D2_ORYSJcDNA clone:001-109-D03, full insert sequence. (162 aa)
Q6YUS0_ORYSJcDNA clone:J013118M14, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family. (567 aa)
Q6YW24_ORYSJcDNA clone:J023008N13, full insert sequence. (601 aa)
Q6YXC2_ORYSJOs02g0573200 protein. (718 aa)
Q6Z2G8_ORYSJcDNA clone:J023078F08, full insert sequence. (184 aa)
APR1Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis. (475 aa)
Q6Z5V6_ORYSJExocyst subunit Exo70 family protein; Component of the exocyst complex. (700 aa)
NCS6Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (363 aa)
Q6Z6L3_ORYSJOs02g0218400 protein. (730 aa)
Q6ZHE6_ORYSJcDNA clone:002-143-H02, full insert sequence. (165 aa)
OJ1014_E09.9Phosphopantetheine adenylyltransferase 1; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Does not accept 4'-phosphopantothenoylcysteine as a substrate (By similarity); Belongs to the eukaryotic CoaD family. (187 aa)
Q75HQ2_ORYSJOs05g0428400 protein. (225 aa)
ETFAElectron transfer flavoprotein subunit alpha, mitochondrial; The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF- ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity). (358 aa)
Q75M01_ORYSJcDNA clone:J013041K03, full insert sequence. (167 aa)
Q7EYE4_ORYSJcDNA clone:006-204-E10, full insert sequence. (281 aa)
ETFBElectron transfer flavoprotein subunit beta, mitochondrial; The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF- ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity). (253 aa)
Q7XE49_ORYSJUniversal stress protein family protein, expressed. (181 aa)
Q7XHV1_ORYSJOs07g0551400 protein. (268 aa)
Q84MN8_ORYSJBifunctional 3'-phosphoadenosine 5'-phosphosulfate synthethase, putative, expressed. (477 aa)
Q84PX0_ORYSJOs08g0150800 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (394 aa)
Q851K9_ORYSJValyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family. (1054 aa)
OsCRY2cDNA clone:J013042O16, full insert sequence. (651 aa)
Q8H454_ORYSJcDNA clone:001-125-F10, full insert sequence. (171 aa)
Q8H4X9_ORYSJcDNA clone:J013002G12, full insert sequence. (544 aa)
Q8H907_ORYSJUniversal stress protein family protein, expressed. (206 aa)
Q8S292_ORYSJcDNA clone:002-139-G10, full insert sequence. (162 aa)
Q8S5M6_ORYSJGlutamyl-tRNA synthetase family protein, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family. (713 aa)
Q943W5_ORYSJTyrosine--tRNA ligase. (497 aa)
Q94E74_ORYSJcDNA clone:J023069J05, full insert sequence. (167 aa)
CPCTCytidylyltransferase family protein, expressed. (289 aa)
P0561B08.33Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (801 aa)
A0A0N7KGK1Os03g0143300 protein. (137 aa)
A0A0N7KH89Os03g0344166 protein. (106 aa)
A0A0N7KI21Os03g0750000 protein. (85 aa)
A0A0N7KRW9Os10g0463100 protein. (489 aa)
A0A0N7KSC9Os11g0123400 protein. (424 aa)
A0A0P0UX97Os01g0120300 protein. (794 aa)
A0A0P0UYI0Os01g0158500 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (598 aa)
A0A0P0V1F4Os01g0259600 protein. (142 aa)
A0A0P0V4V4Os01g0598900 protein. (325 aa)
A0A0P0VB72Os01g0875300 protein. (314 aa)
A0A0P0VFN6Os02g0183900 protein. (248 aa)
A0A0P0VHF3Os02g0266500 protein. (176 aa)
A0A0P0VMX2Os02g0665800 protein. (554 aa)
A0A0P0VP63Os02g0722001 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (362 aa)
A0A0P0VRD5Os02g0822900 protein. (866 aa)
A0A0P0VS27Os03g0101200 protein. (765 aa)
A0A0P0VX51Os03g0335600 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (538 aa)
A0A0P0WAS3Os04g0452100 protein. (179 aa)
A0A0P0WGE6Os04g0680550 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (332 aa)
A0A0P0X3L4Os07g0210300 protein. (137 aa)
A0A0P0X554Os07g0278400 protein. (107 aa)
Q0JFE2_ORYSJOs04g0111200 protein. (225 aa)
Q5VRX8_ORYSJcDNA clone:J013001P05, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family. (796 aa)
Q5W6Y8_ORYSJOs05g0355400 protein. (110 aa)
Q5Z7K5_ORYSJOs06g0574200 protein. (806 aa)
Q5ZAV7_ORYSJcDNA clone:J023018C18, full insert sequence. (262 aa)
Q5ZB74_ORYSJOs01g0581400 protein. (765 aa)
Q60EJ0_ORYSJcDNA clone:001-007-C02, full insert sequence. (268 aa)
Q60EV0_ORYSJOs05g0241100 protein. (322 aa)
CRYDCryptochrome DASH, chloroplastic/mitochondrial; May have a photoreceptor function. Binds ss- and ds-DNA in a sequence non-specific manner, lacks photolyase activity (By similarity); Belongs to the DNA photolyase class-1 family. (582 aa)
Q652J5_ORYSJOs09g0532700 protein. (695 aa)
Q657H4_ORYSJcDNA clone:006-306-C04, full insert sequence. (182 aa)
Q65XS4_ORYSJcDNA clone:001-118-D04, full insert sequence. (203 aa)
Q67UV9_ORYSJcDNA clone:J023014P05, full insert sequence. (775 aa)
Q67WM2_ORYSJOs06g0645400 protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (849 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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