Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B7ELW5_ORYSJ | B9G2C8_ORYSJ | B7ELW5 | B9G2C8 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | Os09g0252000 protein. | 0.997 |
| B7ELW5_ORYSJ | PNP1 | B7ELW5 | Q69LE7 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | 0.444 |
| B7ELW5_ORYSJ | PNP2 | B7ELW5 | Q6KAI0 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | Polyribonucleotide nucleotidyltransferase 2, mitochondrial; Involved in the 3'-end maturation of mitochondrial mRNAs, rRNAs and tRNAs. Functions as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | 0.444 |
| B7ELW5_ORYSJ | Q2QT85_ORYSJ | B7ELW5 | Q2QT85 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | 3' exoribonuclease family, domain 1 containing protein, expressed. | 0.999 |
| B7ELW5_ORYSJ | Q69T30_ORYSJ | B7ELW5 | Q69T30 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | Os02g0550700 protein. | 0.999 |
| B7ELW5_ORYSJ | Q69UI6_ORYSJ | B7ELW5 | Q69UI6 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | cDNA clone:001-119-G01, full insert sequence. | 0.995 |
| B7ELW5_ORYSJ | Q75LC8_ORYSJ | B7ELW5 | Q75LC8 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | 3' exoribonuclease family, domain 1 containing protein, expressed. | 0.995 |
| B7ELW5_ORYSJ | RRP46 | B7ELW5 | Q84T68 | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | Exosome complex exonuclease RRP46 homolog; Probable component of the exosome 3'->5' exoribonuclease complex, a complex that degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3'-untranslated regions. May form a homodimer separately from exosome complexes and function in DNA cleavage process. Binds double-stranded DNA (dsDNA) and single-stranded RNA (ssRNA), and possesses hydrolytic DNase and phosphorolytic RNase activities in vitro. | 0.999 |
| B9G2C8_ORYSJ | B7ELW5_ORYSJ | B9G2C8 | B7ELW5 | Os09g0252000 protein. | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | 0.997 |
| B9G2C8_ORYSJ | PNP1 | B9G2C8 | Q69LE7 | Os09g0252000 protein. | Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | 0.725 |
| B9G2C8_ORYSJ | PNP2 | B9G2C8 | Q6KAI0 | Os09g0252000 protein. | Polyribonucleotide nucleotidyltransferase 2, mitochondrial; Involved in the 3'-end maturation of mitochondrial mRNAs, rRNAs and tRNAs. Functions as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | 0.725 |
| B9G2C8_ORYSJ | Q2QT85_ORYSJ | B9G2C8 | Q2QT85 | Os09g0252000 protein. | 3' exoribonuclease family, domain 1 containing protein, expressed. | 0.998 |
| B9G2C8_ORYSJ | Q69T30_ORYSJ | B9G2C8 | Q69T30 | Os09g0252000 protein. | Os02g0550700 protein. | 0.995 |
| B9G2C8_ORYSJ | Q69UI6_ORYSJ | B9G2C8 | Q69UI6 | Os09g0252000 protein. | cDNA clone:001-119-G01, full insert sequence. | 0.964 |
| B9G2C8_ORYSJ | Q75LC8_ORYSJ | B9G2C8 | Q75LC8 | Os09g0252000 protein. | 3' exoribonuclease family, domain 1 containing protein, expressed. | 0.964 |
| B9G2C8_ORYSJ | RRP46 | B9G2C8 | Q84T68 | Os09g0252000 protein. | Exosome complex exonuclease RRP46 homolog; Probable component of the exosome 3'->5' exoribonuclease complex, a complex that degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3'-untranslated regions. May form a homodimer separately from exosome complexes and function in DNA cleavage process. Binds double-stranded DNA (dsDNA) and single-stranded RNA (ssRNA), and possesses hydrolytic DNase and phosphorolytic RNase activities in vitro. | 0.995 |
| PNP1 | B7ELW5_ORYSJ | Q69LE7 | B7ELW5 | Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | 3' exoribonuclease family domain 1-containing protein, putative, expressed. | 0.444 |
| PNP1 | B9G2C8_ORYSJ | Q69LE7 | B9G2C8 | Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | Os09g0252000 protein. | 0.725 |
| PNP1 | PNP2 | Q69LE7 | Q6KAI0 | Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | Polyribonucleotide nucleotidyltransferase 2, mitochondrial; Involved in the 3'-end maturation of mitochondrial mRNAs, rRNAs and tRNAs. Functions as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | 0.946 |
| PNP1 | Q69UI6_ORYSJ | Q69LE7 | Q69UI6 | Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity). | cDNA clone:001-119-G01, full insert sequence. | 0.705 |
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