STRINGSTRING
Q0J8Z1_ORYSJ Q0J8Z1_ORYSJ OsPBA1 OsPBA1 OsPBB1 OsPBB1 Q9FWV0_ORYSJ Q9FWV0_ORYSJ LST8 LST8 RPS27AA RPS27AA HD6 HD6 Q8W5G9_ORYSJ Q8W5G9_ORYSJ Q8RUE8_ORYSJ Q8RUE8_ORYSJ Q8LNG7_ORYSJ Q8LNG7_ORYSJ Q8LN60_ORYSJ Q8LN60_ORYSJ Q8H386_ORYSJ Q8H386_ORYSJ Q84RS4_ORYSJ Q84RS4_ORYSJ OsSig2B OsSig2B SIG6 SIG6 Q7Y011_ORYSJ Q7Y011_ORYSJ Q7XM18_ORYSJ Q7XM18_ORYSJ Q7XJ10_ORYSJ Q7XJ10_ORYSJ Q7XAM7_ORYSJ Q7XAM7_ORYSJ Q7FAG9_ORYSJ Q7FAG9_ORYSJ Q7EYM0_ORYSJ Q7EYM0_ORYSJ Q75LC7_ORYSJ Q75LC7_ORYSJ FIE2 FIE2 FIE1 FIE1 Q6ZG00_ORYSJ Q6ZG00_ORYSJ Q6Z921_ORYSJ Q6Z921_ORYSJ Q6YXJ6_ORYSJ Q6YXJ6_ORYSJ Q6YX33_ORYSJ Q6YX33_ORYSJ OJ1112_E06.28 OJ1112_E06.28 Q6KA61_ORYSJ Q6KA61_ORYSJ Q6KA01_ORYSJ Q6KA01_ORYSJ IRL6 IRL6 Q6K4K9_ORYSJ Q6K4K9_ORYSJ B'KAPPA B'KAPPA Q6I605_ORYSJ Q6I605_ORYSJ PIPK1 PIPK1 Q6AT11_ORYSJ Q6AT11_ORYSJ EMF2B EMF2B Q5ZD18_ORYSJ Q5ZD18_ORYSJ Q5ZBT1_ORYSJ Q5ZBT1_ORYSJ Q5ZA54_ORYSJ Q5ZA54_ORYSJ MKRN MKRN OsJ_20104 OsJ_20104 Q5VPF1_ORYSJ Q5VPF1_ORYSJ Q5VMN4_ORYSJ Q5VMN4_ORYSJ Q5VMB3_ORYSJ Q5VMB3_ORYSJ Q5QMW8_ORYSJ Q5QMW8_ORYSJ Q5N6U7_ORYSJ Q5N6U7_ORYSJ Q5JMX4_ORYSJ Q5JMX4_ORYSJ Q53KH7_ORYSJ Q53KH7_ORYSJ Q337S3_ORYSJ Q337S3_ORYSJ Q336R6_ORYSJ Q336R6_ORYSJ Q2QXW3_ORYSJ Q2QXW3_ORYSJ Q2QW43_ORYSJ Q2QW43_ORYSJ Q10R90_ORYSJ Q10R90_ORYSJ Q10Q71_ORYSJ Q10Q71_ORYSJ Q10L79_ORYSJ Q10L79_ORYSJ PP2A2 PP2A2 Q0JQ73_ORYSJ Q0JQ73_ORYSJ EMF2A EMF2A PAD1 PAD1 Q0IUN7_ORYSJ Q0IUN7_ORYSJ RAPTOR2 RAPTOR2 PP2A3 PP2A3 Q0DTA0_ORYSJ Q0DTA0_ORYSJ PP2A1 PP2A1 Q0D796_ORYSJ Q0D796_ORYSJ PAF1 PAF1 RPS27AB RPS27AB RAPTOR1 RAPTOR1 C7J0B6_ORYSJ C7J0B6_ORYSJ B1103G11.7 B1103G11.7 B7F961_ORYSJ B7F961_ORYSJ PP2A4 PP2A4 A0A0P0YBV3 A0A0P0YBV3 A0A0P0Y662 A0A0P0Y662 A0A0P0Y3N3 A0A0P0Y3N3 A0A0P0XY03 A0A0P0XY03 A0A0P0XK51 A0A0P0XK51 A0A0P0X317 A0A0P0X317 A0A0P0WQU9 A0A0P0WQU9 A0A0P0WPB2 A0A0P0WPB2 A0A0P0WEK5 A0A0P0WEK5 A0A0P0VRN2 A0A0P0VRN2 A0A0P0V8T3 A0A0P0V8T3 A0A0P0UZ37 A0A0P0UZ37 A0A0N7KSF2 A0A0N7KSF2 A0A0N7KLZ4 A0A0N7KLZ4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q0J8Z1_ORYSJOs04g0679800 protein. (157 aa)
OsPBA1Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (246 aa)
OsPBB1Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (272 aa)
Q9FWV0_ORYSJUbiquitin fusion protein, putative, expressed. (147 aa)
LST8Target of rapamycin complex subunit LST8; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat LST8 family. (316 aa)
RPS27AAUbiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
HD6Inactive casein kinase II subunit alpha-2; The Nipponbare allele of HD6 contains a premature stop codon, resulting in a truncated non-functional product. (90 aa)
Q8W5G9_ORYSJCasein kinase II, alpha chain, putative, expressed; Belongs to the protein kinase superfamily. (408 aa)
Q8RUE8_ORYSJPutative 3-phosphoinositide-dependent protein kinase-1. (498 aa)
Q8LNG7_ORYSJRNA-binding protein, putative, expressed. (242 aa)
Q8LN60_ORYSJPhosphatidylinositol 4-phosphate 5-kinase. (731 aa)
Q8H386_ORYSJOs07g0114400 protein; Belongs to the protein kinase superfamily. (333 aa)
Q84RS4_ORYSJCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (288 aa)
OsSig2BRNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (540 aa)
SIG6RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (572 aa)
Q7Y011_ORYSJSerine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (535 aa)
Q7XM18_ORYSJRepressor of RNA polymerase III transcription. (224 aa)
Q7XJ10_ORYSJSerine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (482 aa)
Q7XAM7_ORYSJPhosphatidylinositol 4-phosphate 5-kinase. (791 aa)
Q7FAG9_ORYSJSerine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (509 aa)
Q7EYM0_ORYSJcDNA clone:006-207-G05, full insert sequence. (242 aa)
Q75LC7_ORYSJSerine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (517 aa)
FIE2Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Involved in the regulation of seed endosperm development, grain filling and seed dormancy. FIE2-containing PcG complex in seed endosperm regulates the expres [...] (376 aa)
FIE1Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Together with EZ1 and CLF forms a complex that is involved in gene transcriptional repression by trimethylation on histone H3 'Lys-27' (H3K27me3) of target g [...] (466 aa)
Q6ZG00_ORYSJcDNA clone:J033083N01, full insert sequence. (827 aa)
Q6Z921_ORYSJ26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (987 aa)
Q6YXJ6_ORYSJSerine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (517 aa)
Q6YX33_ORYSJSerine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (516 aa)
OJ1112_E06.28Proteasome subunit alpha type-7-A; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (249 aa)
Q6KA61_ORYSJOs02g0285800 protein. (669 aa)
Q6KA01_ORYSJPhosphatidylinositol 4-phosphate 5-kinase. (824 aa)
IRL6Plant intracellular Ras-group-related LRR protein 6; Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. (586 aa)
Q6K4K9_ORYSJcDNA clone:J023031G02, full insert sequence. (587 aa)
B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform; B regulatory subunit of phosphatase 2A (PP2A) involved in salt stress response. Under salt stress conditions, required for the catalytic activity of PP2A and the dephosphorylation of SIT1, a negative regulator of salt tolerance. Dephosphorylation of SIT1 turns off salt-induced SIT1 activity directly, which has a positive effect on salt tolerance. (510 aa)
Q6I605_ORYSJcDNA clone:001-044-G10, full insert sequence. (526 aa)
PIPK1Phosphatidylinositol 4-phosphate 5-kinase 1; Involved in flowering. May suppress floral initiation by modifying the expression of genes related to floral induction. (801 aa)
Q6AT11_ORYSJSerine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (491 aa)
EMF2BPolycomb group protein EMF2B; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility (Probable). Polycomb group (PcG) protein involved in the repression of flowering under long day (LD) conditions. Regulates floret development ; Belongs to th [...] (604 aa)
Q5ZD18_ORYSJOs01g0771800 protein. (189 aa)
Q5ZBT1_ORYSJcDNA clone:J013119G16, full insert sequence. (489 aa)
Q5ZA54_ORYSJOs06g0298400 protein. (860 aa)
MKRNE3 ubiquitin-protein ligase makorin; E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. (368 aa)
OsJ_20104Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (663 aa)
Q5VPF1_ORYSJProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (246 aa)
Q5VMN4_ORYSJProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (277 aa)
Q5VMB3_ORYSJOs06g0155600 protein. (643 aa)
Q5QMW8_ORYSJcDNA clone:J023064M06, full insert sequence. (1183 aa)
Q5N6U7_ORYSJcDNA clone:001-208-D10, full insert sequence. (252 aa)
Q5JMX4_ORYSJOs01g0752700 protein. (673 aa)
Q53KH7_ORYSJOs11g0448400 protein. (368 aa)
Q337S3_ORYSJcDNA clone:J013093E22, full insert sequence. (246 aa)
Q336R6_ORYSJCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (279 aa)
Q2QXW3_ORYSJPhosphatidylinositol 4-phosphate 5-kinase. (801 aa)
Q2QW43_ORYSJOs12g0209000 protein. (395 aa)
Q10R90_ORYSJSerine/threonine-protein phosphatase. (314 aa)
Q10Q71_ORYSJCasein kinase II, alpha chain, putative, expressed; Belongs to the protein kinase superfamily. (332 aa)
Q10L79_ORYSJPhosphatidylinositol 4-phosphate 5-kinase. (755 aa)
PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (307 aa)
Q0JQ73_ORYSJOs01g0178400 protein. (205 aa)
EMF2APolycomb group protein EMF2A; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. (624 aa)
PAD1Proteasome subunit alpha type-7-B; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (249 aa)
Q0IUN7_ORYSJOs11g0146100 protein. (495 aa)
RAPTOR2Regulatory-associated protein of TOR 2; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by recruiting substrates for TOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat RAPTOR family. (1359 aa)
PP2A3Serine/threonine-protein phosphatase PP2A-3 catalytic subunit. (307 aa)
Q0DTA0_ORYSJOs03g0262000 protein. (438 aa)
PP2A1Serine/threonine-protein phosphatase PP2A-1 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (306 aa)
Q0D796_ORYSJOs07g0275300 protein. (253 aa)
PAF1Proteasome subunit alpha type-1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (270 aa)
RPS27ABUbiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
RAPTOR1Regulatory-associated protein of TOR 1; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by recruiting substrates for TOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat RAPTOR family. (1218 aa)
C7J0B6_ORYSJOs03g0356596 protein. (472 aa)
B1103G11.7Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (680 aa)
B7F961_ORYSJcDNA, clone: J075093E01, full insert sequence. (292 aa)
PP2A4Serine/threonine-protein phosphatase PP2A-4 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (314 aa)
A0A0P0YBV3Os12g0590066 protein. (95 aa)
A0A0P0Y662Os12g0110050 protein. (129 aa)
A0A0P0Y3N3Os11g0578200 protein. (168 aa)
A0A0P0XY03Os11g0109950 protein. (130 aa)
A0A0P0XK51Os09g0117800 protein. (347 aa)
A0A0P0X317Os07g0187400 protein. (699 aa)
A0A0P0WQU9Os05g0586600 protein. (355 aa)
A0A0P0WPB2Os05g0497600 protein. (488 aa)
A0A0P0WEK5Os04g0608500 protein. (308 aa)
A0A0P0VRN2Os02g0826566 protein. (212 aa)
A0A0P0V8T3Os01g0771600 protein. (208 aa)
A0A0P0UZ37Os01g0170100 protein. (272 aa)
A0A0N7KSF2Phosphatidylinositol 4-phosphate 5-kinase. (797 aa)
A0A0N7KLZ4Os06g0301300 protein. (687 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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