STRINGSTRING
A0A0P0WWJ7 A0A0P0WWJ7 CYCT1-1-2 CYCT1-1-2 Q10T38_ORYSJ Q10T38_ORYSJ Q10P09_ORYSJ Q10P09_ORYSJ Q10KZ8_ORYSJ Q10KZ8_ORYSJ CYCH1-1 CYCH1-1 Q0JM77_ORYSJ Q0JM77_ORYSJ Q0JK78_ORYSJ Q0JK78_ORYSJ Q7XIB4_ORYSJ Q7XIB4_ORYSJ Q8H5Y4_ORYSJ Q8H5Y4_ORYSJ SPT16 SPT16 Q75M02_ORYSJ Q75M02_ORYSJ Q75KI1_ORYSJ Q75KI1_ORYSJ A0A0P0Y0D5 A0A0P0Y0D5 A0A0P0Y0B2 A0A0P0Y0B2 A0A0P0Y081 A0A0P0Y081 A0A0P0XYM3 A0A0P0XYM3 A0A0P0XGE1 A0A0P0XGE1 A0A0P0XEP3 A0A0P0XEP3 A0A0P0XA24 A0A0P0XA24 A0A0P0X8U6 A0A0P0X8U6 A0A0P0X8M3 A0A0P0X8M3 A0A0P0X1M5 A0A0P0X1M5 A0A0P0X1I6 A0A0P0X1I6 A0A0P0X0W6 A0A0P0X0W6 A0A0P0WYM3 A0A0P0WYM3 A0A0P0WR59 A0A0P0WR59 A0A0P0WNZ6 A0A0P0WNZ6 A0A0P0WJH1 A0A0P0WJH1 A0A0P0WIR8 A0A0P0WIR8 A0A0P0WGE3 A0A0P0WGE3 A0A0P0WG98 A0A0P0WG98 A0A0P0WFI4 A0A0P0WFI4 A0A0P0WFD3 A0A0P0WFD3 A0A0P0WED8 A0A0P0WED8 A0A0P0WCN4 A0A0P0WCN4 A0A0P0WAY1 A0A0P0WAY1 A0A0P0W5J3 A0A0P0W5J3 A0A0P0W1G0 A0A0P0W1G0 A0A0P0VXG3 A0A0P0VXG3 A0A0P0VQL1 A0A0P0VQL1 A0A0P0VPZ7 A0A0P0VPZ7 A0A0P0VI47 A0A0P0VI47 A0A0P0VC65 A0A0P0VC65 A0A0P0UZC0 A0A0P0UZC0 A0A0N7KTC4 A0A0N7KTC4 A0A0N7KSM5 A0A0N7KSM5 A0A0N7KPV9 A0A0N7KPV9 A0A0N7KM73 A0A0N7KM73 A0A0N7KJZ7 A0A0N7KJZ7 A0A0N7KJM0 A0A0N7KJM0 A0A0N7KJC3 A0A0N7KJC3 Q8GSD5_ORYSJ Q8GSD5_ORYSJ Q84TW3_ORYSJ Q84TW3_ORYSJ Q84SP5_ORYSJ Q84SP5_ORYSJ Q7XS72_ORYSJ Q7XS72_ORYSJ Q7XKD9_ORYSJ Q7XKD9_ORYSJ Q8LHK9_ORYSJ Q8LHK9_ORYSJ Q8LI69_ORYSJ Q8LI69_ORYSJ P0560B06.11 P0560B06.11 Q9AXB2_ORYSJ Q9AXB2_ORYSJ Q6ZL18_ORYSJ Q6ZL18_ORYSJ Q6ZGM1_ORYSJ Q6ZGM1_ORYSJ Q6ZCC7_ORYSJ Q6ZCC7_ORYSJ Q6ZC85_ORYSJ Q6ZC85_ORYSJ CDKC-1-2 CDKC-1-2 Q6ZA50_ORYSJ Q6ZA50_ORYSJ CYCT1_2 CYCT1_2 Q6Z2N2_ORYSJ Q6Z2N2_ORYSJ Q6YX88_ORYSJ Q6YX88_ORYSJ Q6YU34_ORYSJ Q6YU34_ORYSJ Q6YTX4_ORYSJ Q6YTX4_ORYSJ Q6YTW9_ORYSJ Q6YTW9_ORYSJ Q6YTW7_ORYSJ Q6YTW7_ORYSJ Q6YTW5_ORYSJ Q6YTW5_ORYSJ Q6YTW3_ORYSJ Q6YTW3_ORYSJ Q6L4V9_ORYSJ Q6L4V9_ORYSJ Q6K8Y2_ORYSJ Q6K8Y2_ORYSJ Q6K246_ORYSJ Q6K246_ORYSJ CDKC-1 CDKC-1 Q6H5U8_ORYSJ Q6H5U8_ORYSJ Q6F2V1_ORYSJ Q6F2V1_ORYSJ Q6AUI3_ORYSJ Q6AUI3_ORYSJ Q6ATY6_ORYSJ Q6ATY6_ORYSJ Q69T55_ORYSJ Q69T55_ORYSJ Q69JW8_ORYSJ Q69JW8_ORYSJ Q65X21_ORYSJ Q65X21_ORYSJ Q5VQW7_ORYSJ Q5VQW7_ORYSJ Q5SNL8_ORYSJ Q5SNL8_ORYSJ Q5N8X8_ORYSJ Q5N8X8_ORYSJ Q5N890_ORYSJ Q5N890_ORYSJ CDKC-2 CDKC-2 Q53QT1_ORYSJ Q53QT1_ORYSJ Q53P12_ORYSJ Q53P12_ORYSJ Q53NW5_ORYSJ Q53NW5_ORYSJ Q53N86_ORYSJ Q53N86_ORYSJ Q53LH8_ORYSJ Q53LH8_ORYSJ CYCT1-3 CYCT1-3 Q2R4I6_ORYSJ Q2R4I6_ORYSJ Q2QZU6_ORYSJ Q2QZU6_ORYSJ Q0J7Q4_ORYSJ Q0J7Q4_ORYSJ Q0IUD4_ORYSJ Q0IUD4_ORYSJ Q0ITS2_ORYSJ Q0ITS2_ORYSJ Q0IQ77_ORYSJ Q0IQ77_ORYSJ Q0IMM9_ORYSJ Q0IMM9_ORYSJ CYCT1-1 CYCT1-1 Q0E2W4_ORYSJ Q0E2W4_ORYSJ Q0D7N2_ORYSJ Q0D7N2_ORYSJ rpoC2 rpoC2 rpoC1 rpoC1 rpoB rpoB C7JAB9_ORYSJ C7JAB9_ORYSJ C7JAB3_ORYSJ C7JAB3_ORYSJ C7J5J3_ORYSJ C7J5J3_ORYSJ C7J286_ORYSJ C7J286_ORYSJ B9FMY7_ORYSJ B9FMY7_ORYSJ B9FEJ8_ORYSJ B9FEJ8_ORYSJ B9EXB4_ORYSJ B9EXB4_ORYSJ B7EQI7_ORYSJ B7EQI7_ORYSJ A3BMZ6_ORYSJ A3BMZ6_ORYSJ A3AXX0_ORYSJ A3AXX0_ORYSJ A0A0P0YBP9 A0A0P0YBP9 A0A0P0Y7J1 A0A0P0Y7J1 A0A0P0Y2X9 A0A0P0Y2X9 Q2QX87_ORYSJ Q2QX87_ORYSJ Q2QRX9_ORYSJ Q2QRX9_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0P0WWJ7Os06g0472700 protein. (499 aa)
CYCT1-1-2Cyclin-T1-4; Belongs to the cyclin family. Cyclin T subfamily. (543 aa)
Q10T38_ORYSJDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
Q10P09_ORYSJTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (527 aa)
Q10KZ8_ORYSJcDNA clone:001-104-D11, full insert sequence. (95 aa)
CYCH1-1Cyclin-H1-1; Involved in cell cycle regulation. May be a regulatory subunit of CDKD-1/CAK-R2. (330 aa)
Q0JM77_ORYSJOs01g0530300 protein. (204 aa)
Q0JK78_ORYSJOs01g0691600 protein. (580 aa)
Q7XIB4_ORYSJOs07g0596600 protein. (707 aa)
Q8H5Y4_ORYSJOs07g0611500 protein. (259 aa)
SPT16FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1056 aa)
Q75M02_ORYSJcDNA clone:001-102-A10, full insert sequence. (175 aa)
Q75KI1_ORYSJRNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II. (536 aa)
A0A0P0Y0D5Os11g0218737 protein. (144 aa)
A0A0P0Y0B2Os11g0218619 protein. (125 aa)
A0A0P0Y081Os11g0218560 protein. (79 aa)
A0A0P0XYM3Os11g0143400 protein. (336 aa)
A0A0P0XGE1Os08g0404350 protein. (220 aa)
A0A0P0XEP3Os08g0332100 protein. (77 aa)
A0A0P0XA24Os07g0668000 protein. (31 aa)
A0A0P0X8U6Os07g0610700 protein. (253 aa)
A0A0P0X8M3Os07g0611200 protein. (208 aa)
A0A0P0X1M5Os06g0731700 protein. (349 aa)
A0A0P0X1I6Os07g0105100 protein. (62 aa)
A0A0P0X0W6Os06g0697400 protein. (103 aa)
A0A0P0WYM3Os06g0595900 protein. (268 aa)
A0A0P0WR59Os06g0100400 protein. (113 aa)
A0A0P0WNZ6Os05g0493133 protein. (217 aa)
A0A0P0WJH1Os05g0224700 protein. (210 aa)
A0A0P0WIR8Os05g0183400 protein. (326 aa)
A0A0P0WGE3Os04g0675700 protein. (130 aa)
A0A0P0WG98Os04g0675800 protein. (1119 aa)
A0A0P0WFI4Os04g0644675 protein. (531 aa)
A0A0P0WFD3DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1252 aa)
A0A0P0WED8Os04g0596850 protein. (94 aa)
A0A0P0WCN4Os04g0529500 protein. (933 aa)
A0A0P0WAY1Os04g0458200 protein. (659 aa)
A0A0P0W5J3Os03g0847800 protein. (42 aa)
A0A0P0W1G0Os03g0646800 protein. (195 aa)
A0A0P0VXG3Os03g0349200 protein. (130 aa)
A0A0P0VQL1Os02g0796100 protein. (323 aa)
A0A0P0VPZ7Os02g0772000 protein. (346 aa)
A0A0P0VI47Os02g0304500 protein. (521 aa)
A0A0P0VC65Os01g0925700 protein. (371 aa)
A0A0P0UZC0Os01g0201000 protein. (128 aa)
A0A0N7KTC4Os11g0676650 protein. (80 aa)
A0A0N7KSM5Os11g0218678 protein. (75 aa)
A0A0N7KPV9Os08g0426000 protein. (308 aa)
A0A0N7KM73Os06g0523100 protein. (496 aa)
A0A0N7KJZ7Os04g0693100 protein. (208 aa)
A0A0N7KJM0Os04g0596800 protein. (95 aa)
A0A0N7KJC3General transcription factor IIH subunit. (495 aa)
Q8GSD5_ORYSJDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (116 aa)
Q84TW3_ORYSJTranscription elongation factor S-II family protein, expressed. (367 aa)
Q84SP5_ORYSJRNA polymerase Rpb8 family protein, expressed; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (148 aa)
Q7XS72_ORYSJcDNA clone:J033138G07, full insert sequence. (365 aa)
Q7XKD9_ORYSJRNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (451 aa)
Q8LHK9_ORYSJTranscription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (131 aa)
Q8LI69_ORYSJcDNA clone:J033097N04, full insert sequence. (142 aa)
P0560B06.11Putative CRK1 protein. (558 aa)
Q9AXB2_ORYSJcDNA clone:J013038F15, full insert sequence. (646 aa)
Q6ZL18_ORYSJcDNA clone:J033072E11, full insert sequence. (131 aa)
Q6ZGM1_ORYSJcDNA clone:J023131N03, full insert sequence. (142 aa)
Q6ZCC7_ORYSJOs08g0112500 protein. (748 aa)
Q6ZC85_ORYSJcDNA clone:J013129O14, full insert sequence. (604 aa)
CDKC-1-2Cyclin-dependent kinase C-3. (324 aa)
Q6ZA50_ORYSJcDNA clone:J013053F13, full insert sequence. (120 aa)
CYCT1_2Cyclin-T1-2. (630 aa)
Q6Z2N2_ORYSJcDNA clone:J033106M17, full insert sequence. (289 aa)
Q6YX88_ORYSJcDNA clone:006-305-H09, full insert sequence. (330 aa)
Q6YU34_ORYSJcDNA clone:J023088A16, full insert sequence. (729 aa)
Q6YTX4_ORYSJOs07g0609100 protein. (258 aa)
Q6YTW9_ORYSJOs07g0609600 protein. (185 aa)
Q6YTW7_ORYSJOs07g0609700 protein. (185 aa)
Q6YTW5_ORYSJOs07g0609800 protein. (167 aa)
Q6YTW3_ORYSJOs07g0610200 protein. (237 aa)
Q6L4V9_ORYSJcDNA clone:J023147N17, full insert sequence. (259 aa)
Q6K8Y2_ORYSJRNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II. (420 aa)
Q6K246_ORYSJOs02g0259100 protein. (631 aa)
CDKC-1Cyclin-dependent kinase C-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (519 aa)
Q6H5U8_ORYSJcDNA clone:J013105C11, full insert sequence. (940 aa)
Q6F2V1_ORYSJDNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative, expressed. (142 aa)
Q6AUI3_ORYSJOs05g0144800 protein. (758 aa)
Q6ATY6_ORYSJcDNA clone:J023138C10, full insert sequence. (177 aa)
Q69T55_ORYSJOs06g0208300 protein. (291 aa)
Q69JW8_ORYSJcDNA clone:001-202-D10, full insert sequence. (655 aa)
Q65X21_ORYSJOs05g0108500 protein. (65 aa)
Q5VQW7_ORYSJcDNA clone:006-211-F07, full insert sequence. (210 aa)
Q5SNL8_ORYSJcDNA clone:J033143J20, full insert sequence. (195 aa)
Q5N8X8_ORYSJOs01g0772200 protein. (277 aa)
Q5N890_ORYSJOs01g0857000 protein. (756 aa)
CDKC-2Cyclin-dependent kinase C-2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (513 aa)
Q53QT1_ORYSJTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (529 aa)
Q53P12_ORYSJcDNA clone:J023120N10, full insert sequence. (492 aa)
Q53NW5_ORYSJSkp1 family, tetramerisation domain containing protein, expressed; Belongs to the SKP1 family. (124 aa)
Q53N86_ORYSJProtein kinase domain containing protein, expressed. (579 aa)
Q53LH8_ORYSJDNA-directed RNA polymerase II 8.2 kDa polypeptide, putative, expressed. (74 aa)
CYCT1-3Cyclin-T1-3; Belongs to the cyclin family. Cyclin T subfamily. (490 aa)
Q2R4I6_ORYSJCDK-activating kinase assembly factor MAT1 family protein, expressed. (195 aa)
Q2QZU6_ORYSJcDNA clone:002-141-D12, full insert sequence. (185 aa)
Q0J7Q4_ORYSJOs08g0171600 protein. (462 aa)
Q0IUD4_ORYSJOs11g0166800 protein. (238 aa)
Q0ITS2_ORYSJOs11g0223400 protein. (406 aa)
Q0IQ77_ORYSJOs12g0139500 protein. (227 aa)
Q0IMM9_ORYSJOs12g0560400 protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (104 aa)
CYCT1-1Cyclin-T1-1; Belongs to the cyclin family. Cyclin T subfamily. (446 aa)
Q0E2W4_ORYSJOs02g0208600 protein. (913 aa)
Q0D7N2_ORYSJcDNA clone:J033126I22, full insert sequence. (379 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1513 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (682 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1075 aa)
C7JAB9_ORYSJOs12g0203000 protein. (273 aa)
C7JAB3_ORYSJOs12g0582600 protein. (194 aa)
C7J5J3_ORYSJOs08g0404400 protein. (307 aa)
C7J286_ORYSJOs05g0506200 protein. (586 aa)
B9FMY7_ORYSJOs05g0198700 protein. (81 aa)
B9FEJ8_ORYSJOs04g0347900 protein. (633 aa)
B9EXB4_ORYSJOs01g0530366 protein. (52 aa)
B7EQI7_ORYSJcDNA clone:J023098I05, full insert sequence. (167 aa)
A3BMZ6_ORYSJOs07g0656300 protein. (238 aa)
A3AXX0_ORYSJOs04g0640900 protein. (637 aa)
A0A0P0YBP9Os12g0577700 protein. (740 aa)
A0A0P0Y7J1Os12g0180400 protein. (103 aa)
A0A0P0Y2X9Os11g0521900 protein. (1226 aa)
Q2QX87_ORYSJTranscription elongation factor, putative, expressed. (340 aa)
Q2QRX9_ORYSJMetallopeptidase family M24 containing protein, expressed. (1069 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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